|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 601 to 686 out of 686 for Sox6

<< First    < Previous  |  Next >    Last >>
0.039s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Publication
21884692 | J:178379
First Author: Richard AF
Year: 2011
Journal: Dev Biol
Title: Genesis of muscle fiber-type diversity during mouse embryogenesis relies on Six1 and Six4 gene expression.
Volume: 359
Issue: 2
Pages: 303-20
•
•
•
•
•
Publication
22696295 | J:185583
First Author: Metzakopian E
Year: 2012
Journal: Development
Title: Genome-wide characterization of Foxa2 targets reveals upregulation of floor plate genes and repression of ventrolateral genes in midbrain dopaminergic progenitors.
Volume: 139
Issue: 14
Pages: 2625-34
•
•
•
•
•
Publication
37566909 | J:341393
First Author: Cheffer A
Year: 2023
Journal: Cereb Cortex
Title: DOT1L deletion impairs the development of cortical parvalbumin-expressing interneurons.
Volume: 33
Issue: 19
Pages: 10272-10285
•
•
•
•
•
Publication
31351040 | J:282348
First Author: Dasgupta K
Year: 2019
Journal: Dev Biol
Title: Molecular patterning of the embryonic cranial mesenchyme revealed by genome-wide transcriptional profiling.
Volume: 455
Issue: 2
Pages: 434-448
•
•
•
•
•
Publication
27597886 | J:270627
First Author: Sakakibara I
Year: 2016
Journal: Skelet Muscle
Title: Six1 homeoprotein drives myofiber type IIA specialization in soleus muscle.
Volume: 6
Issue: 1
Pages: 30
•
•
•
•
•
Publication
28827394 | J:245768
First Author: Landry-Truchon K
Year: 2017
Journal: Development
Title: HOXA5 plays tissue-specific roles in the developing respiratory system.
Volume: 144
Issue: 19
Pages: 3547-3561
•
•
•
•
•
Publication
35175194 | J:321499
   
First Author: Lee DR
Year: 2022
Journal: Elife
Title: Transcriptional heterogeneity of ventricular zone cells in the ganglionic eminences of the mouse forebrain.
Volume: 11
•
•
•
•
•
Publication
35377797 | J:325356
First Author: Su-Feher L
Year: 2022
Journal: Proc Natl Acad Sci U S A
Title: Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.
Volume: 119
Issue: 15
Pages: e2108760119
•
•
•
•
•
Publication
- | J:82809
     
First Author: European Mouse Mutant Archive
Year: 2003
Journal: Unpublished
Title: Information obtained from the European Mouse Mutant Archive (EMMA)
•
•
•
•
•
Publication
16919269 | J:112701
First Author: Bailey PJ
Year: 2006
Journal: Exp Cell Res
Title: A global genomic transcriptional code associated with CNS-expressed genes.
Volume: 312
Issue: 16
Pages: 3108-19
•
•
•
•
•
Publication
20932939 | J:168654
First Author: Chung YC
Year: 2011
Journal: Gene Expr Patterns
Title: Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus.
Volume: 11
Issue: 1-2
Pages: 84-92
•
•
•
•
•
Publication
- | J:46439
     
First Author: Freeman TC
Year: 1998
Journal: MGI Direct Data Submission
Title: Expression Mapping of Mouse Genes
•
•
•
•
•
Publication
20412781 | J:140465
First Author: Guo G
Year: 2010
Journal: Dev Cell
Title: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Volume: 18
Issue: 4
Pages: 675-85
•
•
•
•
•
Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
•
•
•
•
•
Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
•
•
•
•
•
Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
•
•
•
•
•
Publication
24952961 | J:215487
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
•
•
•
•
•
Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
•
•
•
•
•
Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
•
•
•
•
•
Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
•
•
•
•
•
Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
•
•
•
•
•
Publication
- | J:155856
       
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
HT Experiment
GSE60538 | Sox5 and Sox6 direct a cardiac adaptive response to pressure overload
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Interaction Experiment
Cohen-Barak O (2003)
Description: Sox6 regulation of cardiac myocyte development.
•
•
•
•
•
Regulatory Region
MGI:7330203 | Rr248
Type: enhancer
Organism: mouse, laboratory
•
•
•
•
•
HT Experiment
E-MEXP-400 | Transcription profiling of mouse Sox6 mutant skeletal muscle
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
Publication
31118273 | J:281106
First Author: Li Y
Year: 2019
Journal: J Biol Chem
Title: MicroRNA-223 is essential for maintaining functional β-cell mass during diabetes through inhibiting both FOXO1 and SOX6 pathways.
Volume: 294
Issue: 27
Pages: 10438-10448
•
•
•
•
•
Interaction Experiment
An CI (2013)
Description: Trip12, a HECT domain E3 ubiquitin ligase, targets Sox6 for proteasomal degradation and affects fiber type-specific gene expression in muscle cells.
•
•
•
•
•
Publication
32442410 | -
First Author: Tolchin D
Year: 2020
Journal: Am J Hum Genet
Title: De Novo SOX6 Variants Cause a Neurodevelopmental Syndrome Associated with ADHD, Craniosynostosis, and Osteochondromas.
Volume: 106
Issue: 6
Pages: 830-845
•
•
•
•
•
Allele
Sox6<tm2(cre/ERT2)Awar> | MGI:7264417
Name: SRY (sex determining region Y)-box 6; targeted mutation 2, Rajeshwar Awatramani
Allele Type: Targeted
Attribute String: Conditional ready, Recombinase
•
•
•
•
•
Allele
Sox6<tm1(cre)Awar> | MGI:6726338
Name: SRY (sex determining region Y)-box 6; targeted mutation 1, Rajeshwar Awatramani
Allele Type: Targeted
Attribute String: Conditional ready, Recombinase
•
•
•
•
•
Allele
Sox6<tm2.1(cre/ERT2)Awar> | MGI:6740239
Name: SRY (sex determining region Y)-box 6; targeted mutation 2.1, Rajeshwar Awatramani
Allele Type: Targeted
Attribute String: Inducible, Recombinase
•
•
•
•
•
Chromosome Structure Variation
MGI:2681118 | In(7Oca2;7Sox6)100H
Type: chromosomal_inversion
Organism: mouse, laboratory
•
•
•
•
•
HT Experiment
GSE33173 | Genome-wide profiling of the Sox chondrogenic trio at E13.5
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Publication
23663701 | -
First Author: An CI
Year: 2013
Journal: Skelet Muscle
Title: Trip12, a HECT domain E3 ubiquitin ligase, targets Sox6 for proteasomal degradation and affects fiber type-specific gene expression in muscle cells.
Volume: 3
Issue: 1
Pages: 11
•
•
•
•
•
Allele
Sox6<tm1.1(cre)Awar> | MGI:7264416
Name: SRY (sex determining region Y)-box 6; targeted mutation 1.1, Rajeshwar Awatramani
Allele Type: Targeted
Attribute String: Recombinase
•
•
•
•
•
Allele
Tg(EEF1A1-Socs6)2Pwg | MGI:5314516
Name: transgene insertion 2, Ping Wang
Allele Type: Transgenic
Attribute String: Inserted expressed sequence
•
•
•
•
•
Allele
Tg(EEF1A1-Socs6)1Pwg | MGI:5314513
Name: transgene insertion 1, Ping Wang
Allele Type: Transgenic
Attribute String: Inserted expressed sequence
•
•
•
•
•
Strain
MGI:5314523 | B6.129P2-Tg(EEF1A1-Socs6)2Pwg
Attribute String: transgenic, mutant strain, congenic
•
•
•
•
•
Strain
MGI:5314522 | B6.129P2-Tg(EEF1A1-Socs6)1Pwg
Attribute String: congenic, mutant strain, transgenic
•
•
•
•
•
Strain
MGI:5314514 | B6.129P2-Tg(EEF1A1-Socs6)1Pwg/H
Attribute String: congenic, mutant strain, transgenic
•
•
•
•
•
Genotype
Genotype
Symbol: Tg(EEF1A1-Socs6)1Pwg/?
Background: B6.129P2-Tg(EEF1A1-Socs6)1Pwg
Zygosity: ot
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Tg(EEF1A1-Socs6)2Pwg/?
Background: B6.129P2-Tg(EEF1A1-Socs6)2Pwg
Zygosity: ot
Has Mutant Allele: true
•
•
•
•
•
Allele
In(7Oca2;7Sox6)100H | MGI:2681117
 
Name: inversion, Chr 7, Harwell 100
Allele Type: Radiation induced
•
•
•
•
•
Strain
MGI:3578940 | STOCK In(7Oca2;7Sox6)100H/H
Attribute String: chemically induced mutation, inversion, mutant stock, chromosome aberration, radiation induced mutation
•
•
•
•
•
Genotype
Genotype
Symbol: In(7Oca2;7Sox6)100H/In(7Oca2;7Sox6)100H
Background: Not Specified
Zygosity: hm
Has Mutant Allele: true
•
•
•
•
•
Publication
18415932 | J:133946
First Author: Hargus G
Year: 2008
Journal: Int J Dev Biol
Title: Loss of Sox9 function results in defective chondrocyte differentiation of mouse embryonic stem cells in vitro.
Volume: 52
Issue: 4
Pages: 323-32
•
•
•
•
•
Publication
35318414 | J:322839
First Author: Voss L
Year: 2022
Journal: Sci Rep
Title: Interneuron function and cognitive behavior are preserved upon postnatal removal of Lhx6.
Volume: 12
Issue: 1
Pages: 4923
•
•
•
•
•
Publication
26923596 | J:234361
First Author: Deng Y
Year: 2016
Journal: Cell Rep
Title: Yap1 Regulates Multiple Steps of Chondrocyte Differentiation during Skeletal Development and Bone Repair.
Volume: 14
Issue: 9
Pages: 2224-2237
•
•
•
•
•
Publication
20223198 | J:167652
First Author: Zhao X
Year: 2010
Journal: Neuron
Title: MicroRNA-mediated control of oligodendrocyte differentiation.
Volume: 65
Issue: 5
Pages: 612-26
•
•
•
•
•
Publication
18276598 | J:135567
First Author: Pala D
Year: 2008
Journal: J Biol Chem
Title: Focal adhesion kinase/Src suppresses early chondrogenesis: central role of CCN2.
Volume: 283
Issue: 14
Pages: 9239-47
•
•
•
•
•
Publication
15123678 | J:181312
First Author: Li L
Year: 2004
Journal: J Biol Chem
Title: Insulin induces SOCS-6 expression and its binding to the p85 monomer of phosphoinositide 3-kinase, resulting in improvement in glucose metabolism.
Volume: 279
Issue: 33
Pages: 34107-14
•
•
•
•
•
Publication
32253238 | J:299148
 
First Author: Deryckere A
Year: 2020
Journal: Development
Title: Multifaceted actions of Zeb2 in postnatal neurogenesis from the ventricular-subventricular zone to the olfactory bulb.
Volume: 147
Issue: 10
•
•
•
•
•
Publication
24269712 | J:207837
 
First Author: Schmid R
Year: 2014
Journal: Mech Dev
Title: Redundancy in regulation of chondrogenesis in MIA/CD-RAP-deficient mice.
Volume: 131
Pages: 24-34
•
•
•
•
•
Publication
35650319 | J:328527
First Author: Georgieva VS
Year: 2022
Journal: Sci Rep
Title: Ablation of the miRNA cluster 24 in cartilage and osteoblasts impairs bone remodeling.
Volume: 12
Issue: 1
Pages: 9116
•
•
•
•
•
Publication
22923612 | J:211235
First Author: Anderson DM
Year: 2012
Journal: J Biol Chem
Title: Characterization of the DNA-binding properties of the Mohawk homeobox transcription factor.
Volume: 287
Issue: 42
Pages: 35351-9
•
•
•
•
•
Publication
26527399 | J:247203
First Author: Guo F
Year: 2016
Journal: J Cell Sci
Title: ATF6a, a Runx2-activable transcription factor, is a new regulator of chondrocyte hypertrophy.
Volume: 129
Issue: 4
Pages: 717-28
•
•
•
•
•
Publication
15804237 | J:117498
First Author: Rentsendorj O
Year: 2005
Journal: Biochem J
Title: Highly conserved proximal promoter element harbouring paired Sox9-binding sites contributes to the tissue- and developmental stage-specific activity of the matrilin-1 gene.
Volume: 389
Issue: Pt 3
Pages: 705-16
•
•
•
•
•
Publication
24421874 | J:211939
First Author: Aza-Carmona M
Year: 2014
Journal: PLoS One
Title: NPPB and ACAN, two novel SHOX2 transcription targets implicated in skeletal development.
Volume: 9
Issue: 1
Pages: e83104
•
•
•
•
•
Publication
31506178 | J:291409
First Author: Qi H
Year: 2019
Journal: Biochem Biophys Res Commun
Title: MicroRNA-96 regulates pancreatic β cell function under the pathological condition of diabetes mellitus through targeting Foxo1 and Sox6.
Volume: 519
Issue: 2
Pages: 294-301
•
•
•
•
•
Publication
31811030 | J:341995
First Author: Abecassis ZA
Year: 2020
Journal: J Neurosci
Title: Npas1(+)-Nkx2.1(+) Neurons Are an Integral Part of the Cortico-pallido-cortical Loop.
Volume: 40
Issue: 4
Pages: 743-768
•
•
•
•
•
Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
•
•
•
•
•
Publication
- | J:169366
     
First Author: MouseBookTM
Year: 2005
Journal: Unpublished
Title: Information obtained from MouseBookTM, Medical Research Council Mammalian Genetics Unit, Harwell, UK.
•
•
•
•
•
Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom