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Search results 101 to 178 out of 178 for Smchd1

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Hits by Strain

Hits by Category

Type Details Score
GXD Expression
GXD Expression
   
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Male
Emaps: EMAPS:1797020
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: false
Specimen Num: 1
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•
GXD Expression
GXD Expression
   
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Male
Emaps: EMAPS:2915820
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: false
Specimen Num: 1
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•
GXD Expression
GXD Expression
 
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1736620
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8340
Specimen Label: GUDMAP:8340
Detected: true
Specimen Num: 2
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•
GXD Expression
GXD Expression
     
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2010-12-30
Strength: Absent
Sex: Male
Emaps: EMAPS:1868720
Stage: TS20
Assay Id: MGI:4849744
Age: embryonic day 12.5
Specimen Label: GUDMAP:8339
Detected: false
Specimen Num: 1
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•
GXD Expression
GXD Expression
   
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Male
Emaps: EMAPS:1868720
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: false
Specimen Num: 1
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•
GXD Expression
GXD Expression
 
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1796820
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
GXD Expression
GXD Expression
   
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2010-12-30
Strength: Present
Sex: Male
Emaps: EMAPS:2909820
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:4849744
Age: embryonic day 12.5
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
GXD Expression
GXD Expression
 
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2909820
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
GXD Expression
GXD Expression
 
Probe: MGI:3233872
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603923
Pattern: Ubiquitous
Stage: TS23
Assay Id: MGI:4828328
Age: embryonic day 14.5
Image: euxassay_008416_16
Specimen Label: euxassay_008416_16
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2010-12-30
Strength: Present
Sex: Male
Emaps: EMAPS:2913820
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:4849744
Age: embryonic day 12.5
Note: Expression is present at the gonad-mesonephros border on the mesonephric side.
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
GXD Expression
GXD Expression
 
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2913820
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
GXD Expression
GXD Expression
 
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2010-12-30
Strength: Present
Sex: Male
Emaps: EMAPS:1797220
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:4849744
Age: embryonic day 12.5
Note: Although expression is found in the testis cords, no expression is found at the gonad-mesonephros border on the gonad side.
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
GXD Expression
GXD Expression
 
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1797220
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
GXD Expression
GXD Expression
   
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2010-12-30
Strength: Present
Sex: Male
Emaps: EMAPS:2914320
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:4849744
Age: embryonic day 12.5
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
•
GXD Expression
GXD Expression
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2914320
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Note: weak signal
Specimen Label: GUDMAP:8339
Detected: true
Specimen Num: 1
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•
•
GXD Expression
GXD Expression
   
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Male
Emaps: EMAPS:1797320
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8339
Specimen Label: GUDMAP:8339
Detected: false
Specimen Num: 1
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•
GXD Expression
GXD Expression
Probe: MGI:4845996
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:3087020
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:5540807
Age: embryonic day 12.5
Image: GUDMAP:8340
Note: signal is weak relative to the primary sex cord
Specimen Label: GUDMAP:8340
Detected: true
Specimen Num: 2
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Publication
33004076 | J:316222
First Author: Bouwman LF
Year: 2020
Journal: Skelet Muscle
Title: Dnmt3b regulates DUX4 expression in a tissue-dependent manner in transgenic D4Z4 mice.
Volume: 10
Issue: 1
Pages: 27
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Publication
15890782 | J:99816
First Author: Blewitt ME
Year: 2005
Journal: Proc Natl Acad Sci U S A
Title: An N-ethyl-N-nitrosourea screen for genes involved in variegation in the mouse.
Volume: 102
Issue: 21
Pages: 7629-34
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Publication
30970248 | J:276965
First Author: Delbridge ARD
Year: 2019
Journal: Cell Rep
Title: Loss of p53 Causes Stochastic Aberrant X-Chromosome Inactivation and Female-Specific Neural Tube Defects.
Volume: 27
Issue: 2
Pages: 442-454.e5
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Publication
24025402 | J:201508
First Author: Daxinger L
Year: 2013
Journal: Genome Biol
Title: An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse.
Volume: 14
Issue: 9
Pages: R96
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Publication
- | J:200814
     
First Author: Toronto Centre for Phenogenomics
Year: 2013
Journal: MGI Direct Data Submission
Title: Strains and alleles submitted by Toronto Centre for Phenogenomics (NorCOMM2, funded by Genome Canada and Ontario Genomics Institute OGI-051).
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Publication
19334288 | J:148410
First Author: Combes AN
Year: 2009
Journal: Dev Dyn
Title: Three-dimensional visualization of testis cord morphogenesis, a novel tubulogenic mechanism in development.
Volume: 238
Issue: 5
Pages: 1033-41
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Publication
14621295 | J:86686
First Author: Okazaki N
Year: 2003
Journal: DNA Res
Title: Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Volume: 10
Issue: 4
Pages: 167-80
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Publication
- | J:94077
     
First Author: Mutant Mouse Regional Resource Centers
Year: 2004
Journal: Unpublished
Title: Information obtained from the Mutant Mouse Regional Resource Centers (MMRRC)
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
- | J:72247
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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HT Experiment
E-GEOD-44958 | Smchd1 regulates autosomal genes subject to monoallelic expression
Series Id: GSE44958
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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Publication
29887375 | J:265664
First Author: Wang CY
Year: 2018
Journal: Cell
Title: SMCHD1 Merges Chromosome Compartments and Assists Formation of Super-Structures on the Inactive X.
Volume: 174
Issue: 2
Pages: 406-421.e25
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HT Experiment
GSE183733 | Maternal Smchd1 regulates Hox gene expression and patterning in the mouse embryo [RNAseq tailbud]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
37010434 | J:342756
First Author: Tian X
Year: 2023
Journal: mBio
Title: Genome-Wide CRISPR-Cas9 Screen Identifies SMCHD1 as a Restriction Factor for Herpesviruses.
Volume: 14
Issue: 2
Pages: e0054923
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HT Experiment
E-GEOD-44668 | Genome wide RNA-seq analysis of E14.5 Smchd1 wild type and mutant placenta
Series Id: GSE44668
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-44665 | Genome wide RNA-seq analysis of E9.5 Smchd1 wild type and mutant embryos
Series Id: GSE44665
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE186315 | Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-MTAB-921 | Transcription profiling of mouse E10.5 female embryos wild-type and mutant for Smchd1
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE228674 | Effect of Smchd1 missense mutation on gene expression in embryonic frontonasal prominence tissue
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
28067911 | -
First Author: Gordon CT
Year: 2017
Journal: Nat Genet
Title: De novo mutations in SMCHD1 cause Bosma arhinia microphthalmia syndrome and abrogate nasal development.
Volume: 49
Issue: 2
Pages: 249-255
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Publication
28587678 | -
First Author: Mason AG
Year: 2017
Journal: Skelet Muscle
Title: SMCHD1 regulates a limited set of gene clusters on autosomal chromosomes.
Volume: 7
Issue: 1
Pages: 12
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Publication
23819640 | -
First Author: Mould AW
Year: 2013
Journal: Epigenetics Chromatin
Title: Smchd1 regulates a subset of autosomal genes subject to monoallelic expression in addition to being critical for X inactivation.
Volume: 6
Issue: 1
Pages: 19
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Allele
Smchd1<tm1.1Maar> | MGI:6155687
Name: SMC hinge domain containing 1; targeted mutation 1.1, Silvere van der Maarel
Allele Type: Targeted
Attribute String: Conditional ready
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Allele
Smchd1<tm1.2Maar> | MGI:6155691
Name: SMC hinge domain containing 1; targeted mutation 1.2, Silvere van der Maarel
Allele Type: Targeted
Attribute String: Null/knockout
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Genotype
Genotype
Symbol: Smchd1/Smchd1<+>
Background: involves: C57BL/6 * CAST * FVB
Zygosity: ht
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Smchd1/Smchd1<+>
Background: involves: CAST/Ei * C57BL/6
Zygosity: ht
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Smchd1/Smchd1<+>
Background: involves: BALB/cJ * C57BL/6
Zygosity: ht
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Smchd1/Smchd1
Background: involves: BALB/cJ * C57BL/6
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Smchd1/Smchd1<+>
Background: involves: C57BL/6 * CAST * FVB
Zygosity: ht
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Smchd1/Smchd1 Tg(MMTV-cre)#Mam/?
Background: involves: C57BL/6 * CAST * FVB
Zygosity: cn
Has Mutant Allele: true
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Publication
24781204 | J:216844
First Author: Harten SK
Year: 2014
Journal: Mamm Genome
Title: The first mouse mutants of D14Abb1e (Fam208a) show that it is critical for early development.
Volume: 25
Issue: 7-8
Pages: 293-303
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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