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Search results 101 to 199 out of 199 for Vps33b

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0.026s
Type Details Score
Publication
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication
First Author: Tornieri K
Year: 2013
Journal: Hum Mol Genet
Title: Vps33b pathogenic mutations preferentially affect VIPAS39/SPE-39-positive endosomes.
Volume: 22
Issue: 25
Pages: 5215-28
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
HT Experiment
Series Id: GSE83192
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
Gene
Type: gene
Organism: dog, domestic
Gene
Type: gene
Organism: rat
Gene
Type: gene
Organism: chimpanzee
Gene
Type: gene
Organism: cattle
Gene
Type: gene
Organism: chicken
Gene
Type: gene
Organism: zebrafish
Gene
Type: gene
Organism: macaque, rhesus
Gene
Type: gene
Organism: frog, western clawed
Gene
Type: gene
Organism: frog, African clawed
Allele
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; targeted mutation 1c, Mouse Biology Program, UC Davis
Allele Type: Targeted
Attribute String: Conditional ready
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; wild type
Allele Type: Not Specified
Allele
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; targeted mutation 1, Velocigene
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap CSI697, BayGenomics
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap OST10101, Lexicon Genetics
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap OST240479, Lexicon Genetics
Allele Type: Gene trapped
Genotype
Symbol: Vipas39/Vipas39 Gt(ROSA)26Sor/Gt(ROSA)26Sor<+>
Background: involves: C57BL/6 * C57BL/6J * C57BL/6N
Zygosity: cn
Has Mutant Allele: true
Protein Coding Gene
Type: protein_coding_gene
Organism: Mus caroli
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: Mus pahari
Protein Coding Gene
Type: protein_coding_gene
Organism: Mus spretus
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915526
Pattern: Not Specified
Stage: TS26
Assay Id: MGI:3585330
Age: embryonic day 18.0
Note: Expression was detected in the inner neuroblastic layer.
Specimen Label: E18
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915527
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585330
Age: postnatal day 0-1
Image: P0/1
Note: Expression was detected in the inner neuroblastic layer.
Specimen Label: P0/1
Detected: true
Specimen Num: 3
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915527
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585330
Age: postnatal day 2-3
Note: Expression was detected in the inner neuroblastic layer.
Specimen Label: P2/3
Detected: true
Specimen Num: 4
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915528
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal day 6-7
Image: P6/7
Specimen Label: P6/7
Detected: true
Specimen Num: 6
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915528
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal day 8-10
Image: P8/10
Specimen Label: P8/10
Detected: true
Specimen Num: 7
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Male
Emaps: EMAPS:1915528
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal adult
Image: Adult
Specimen Label: Adult
Detected: true
Specimen Num: 8
GXD Expression    
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3598824
Pattern: Not Specified
Stage: TS24
Assay Id: MGI:3585330
Age: embryonic day 16.0
Specimen Label: Embryo
Detected: true
Specimen Num: 10
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1647028
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal day 6
Note: Expression was widespread.
Specimen Label: CNS
Detected: true
Specimen Num: 9
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603924
Pattern: Not Specified
Stage: TS24
Assay Id: MGI:3585330
Age: embryonic day 16.0
Note: Expression was widespread.
Specimen Label: Embryo
Detected: true
Specimen Num: 10
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915726
Pattern: Not Specified
Stage: TS26
Assay Id: MGI:3585330
Age: embryonic day 18.0
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: E18
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585330
Age: postnatal day 0-1
Image: P0/1
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: P0/1
Detected: true
Specimen Num: 3
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1915727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585330
Age: postnatal day 2-3
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: P2/3
Detected: true
Specimen Num: 4
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915728
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal day 4-5
Note: Expression was detected in the vitreal outer neuroblastic layer.
Specimen Label: P4/5
Detected: true
Specimen Num: 5
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Male
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal adult
Image: Adult
Specimen Label: Adult
Detected: true
Specimen Num: 8
GXD Expression  
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1859224
Pattern: Regionally restricted
Stage: TS24
Assay Id: MGI:3585330
Age: embryonic day 16.0
Note: Expression was detected in the inner and outer neuroblastic layer. The expression was higher in the inner layer.
Specimen Label: E16
Detected: true
Specimen Num: 1
GXD Expression
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3574228
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal day 6-7
Image: P6/7
Note: Expression was detected in amacrine cells.
Specimen Label: P6/7
Detected: true
Specimen Num: 6
GXD Expression
Probe: MGI:3584634
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3574228
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:3585330
Age: postnatal day 8-10
Image: P8/10
Note: Expression was detected in amacrine cells.
Specimen Label: P8/10
Detected: true
Specimen Num: 7
Allele
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; targeted mutation 1e, Mouse Biology Program, UC Davis
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap IST12430C11, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
Allele
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; targeted mutation 1a, Mouse Biology Program, UC Davis
Allele Type: Targeted
Attribute String: Conditional ready, Null/knockout, Reporter
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap XS0879, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap AC0572, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap PST1343, Mammalian Functional Genomics Centre
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap E125F08, German Gene Trap Consortium
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap EUCE0083a02, Helmholtz Zentrum Muenchen GmbH
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap XS0066, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap CC0685, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
Allele  
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog; gene trap E203B01, German Gene Trap Consortium
Allele Type: Gene trapped
DO Term
Allele
Name: vacuolar protein sorting 33B; targeted mutation 1.1, TaconicArtemis
Allele Type: Targeted
Attribute String: Conditional ready, No functional change
Protein Domain
Type: Family
Description: Vacuolar protein sorting-associated protein 33 (Vps33) is essential for vacuolar biogenesis, maturation and function. It is involved in the sorting of vacuolar proteins from the Golgi apparatus and their targeting to the vacuole []. In worm, fly, zebrafish and mammals two homologues of yeast Vps33p have been detected (termed VPS33A and VPS33B in humans). These homologues may reflect the evolution of organelle/tissue-specific functions in multicellular organisms. It is thought that VPS33B may be required for transport to conventional lysosomes, while VPS33A is mainly involved in biogenesis of melanosomes and related lysosomal compartments [, ].
Genotype
Symbol: Vps33b/Vps33b Gt(ROSA)26Sor/Gt(ROSA)26Sor<+>
Background: involves: C57BL/6 * C57BL/6J
Zygosity: cn
Has Mutant Allele: true
DO Term
Publication
First Author: Suzuki T
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: The mouse organellar biogenesis mutant buff results from a mutation in Vps33a, a homologue of yeast vps33 and Drosophila carnation.
Volume: 100
Issue: 3
Pages: 1146-50
Publication
First Author: Iwaki T
Year: 2003
Journal: Yeast
Title: Characterization of vps33+, a gene required for vacuolar biogenesis and protein sorting in Schizosaccharomyces pombe.
Volume: 20
Issue: 10
Pages: 845-55
Publication
First Author: Carim L
Year: 2000
Journal: Cytogenet Cell Genet
Title: Cloning, mapping and expression analysis of VPS33B, the human orthologue of rat Vps33b.
Volume: 89
Issue: 1-2
Pages: 92-5
Protein Domain
Type: Homologous_superfamily
Description: Members of the Sec1 family include Sec1, Sly1, Slp1/Vps33, Vps45/Stt10 (yeast), Unc-18 (nematode), Munc-18b/muSec1, Munc-18c (mouse), Rop (Drosophila), Munc-18/n-Sec1/rbSec1A and rbSec1B (rat) [].The nSec1 polypeptide chain can be divided into three domains. The first domain, consists of a five-stranded parallel β-sheet flanked by five α-helices. The second domain, like the first one, has an α-β-alpha fold, however the β-sheet of domain 2 features five parallel strands with an additional antiparallel strand on one edge. The third domain is a large insertion between the third and fourth parallel strands of domain 2, and can be subdivided in two [].Vacuolar protein sorting-associated protein 33 (Vps33) is essential for vacuolar biogenesis, maturation and function. It is involved in the sorting of vacuolar proteins from the Golgi apparatus and their targeting to the vacuole []. In worm, fly, zebrafish and mammals two homologues of yeast Vps33p have been detected (termed VPS33A and VPS33B in humans). These homologues may reflect the evolution of organelle/tissue-specific functions in multicellular organisms. It is thought that VPS33B may be required for transport to conventional lysosomes, while VPS33A is mainly involved in biogenesis of melanosomes and related lysosomal compartments [, ].This superfamily entry represents the C-terminal region of domain 3 (called domain 3b) found in VPS33.
Protein
Organism: Mus musculus/domesticus
Length: 598  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 598  
Fragment?: false
Publication
First Author: Zhu GD
Year: 2009
Journal: Mol Biol Cell
Title: SPE-39 family proteins interact with the HOPS complex and function in lysosomal delivery.
Volume: 20
Issue: 4
Pages: 1223-40
Publication
First Author: Kahr WH
Year: 2013
Journal: Blood
Title: Abnormal megakaryocyte development and platelet function in Nbeal2(-/-) mice.
Volume: 122
Issue: 19
Pages: 3349-58
Protein
Organism: Mus musculus/domesticus
Length: 104  
Fragment?: true
Protein
Organism: Mus musculus/domesticus
Length: 143  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 617  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 617  
Fragment?: false
Publication
First Author: Halachmi N
Year: 1996
Journal: J Neurochem
Title: The Sec1 family: a novel family of proteins involved in synaptic transmission and general secretion.
Volume: 66
Issue: 3
Pages: 889-97
Publication
First Author: Misura KM
Year: 2000
Journal: Nature
Title: Three-dimensional structure of the neuronal-Sec1-syntaxin 1a complex.
Volume: 404
Issue: 6776
Pages: 355-62
Publication      
First Author: University of California, Davis
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the University of California, Davis
Publication
First Author: Blackshaw S
Year: 2004
Journal: PLoS Biol
Title: Genomic analysis of mouse retinal development.
Volume: 2
Issue: 9
Pages: E247
Publication      
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
Publication
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
Publication
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
Publication        
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
Publication        
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
Publication      
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load