|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 301 to 375 out of 375 for Chd4

<< First    < Previous  |  Next >    Last >>
0.031s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
•
•
•
•
•
Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
•
•
•
•
•
Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
•
•
•
•
•
Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
•
•
•
•
•
Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
•
•
•
•
•
Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
•
•
•
•
•
Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
•
•
•
•
•
Publication
- | J:155856
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Rat to Mouse ISO GO annotation transfer
•
•
•
•
•
Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
•
•
•
•
•
Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
•
•
•
•
•
Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
•
•
•
•
•
Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
•
•
•
•
•
Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Strain
MGI:6122462 | B6;129P2-Chd4<tm1.1Bh>/H
Attribute String: mutant stock, targeted mutation
•
•
•
•
•
HT Experiment
GSE109012 | CHD4 and the NuRD complex directly control cardiac sarcomere formation
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
DO Term
DOID:0070529 | Sifrim-Hitz-Weiss syndrome
•
•
•
•
•
HT Experiment
GSE138822 | The chromatin remodeling enzyme Chd4 regulates genome architecture in the mouse brain
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Interaction Experiment
Ostapcuk V (2018)
Description: Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes.
•
•
•
•
•
Interaction Experiment
Srinivasan R (2006)
Description: NAB2 represses transcription by interacting with the CHD4 subunit of the nucleosome remodeling and deacetylase (NuRD) complex.
•
•
•
•
•
Publication
29795351 | -
First Author: Ostapcuk V
Year: 2018
Journal: Nature
Title: Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes.
Volume: 557
Issue: 7707
Pages: 739-743
•
•
•
•
•
Publication
16574654 | -
First Author: Srinivasan R
Year: 2006
Journal: J Biol Chem
Title: NAB2 represses transcription by interacting with the CHD4 subunit of the nucleosome remodeling and deacetylase (NuRD) complex.
Volume: 281
Issue: 22
Pages: 15129-37
•
•
•
•
•
HT Experiment
E-GEOD-70298 | The NuRD chromatin remodelling complex regulates brain cortical development
Series Id: GSE70298
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
•
•
•
•
•
HT Experiment
GSE229050 | Transcriptome of E18.5 CHD4-M195I mouse hearts
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Protein
Q8K0T3
Organism: Mus musculus/domesticus
Length: 295  
Fragment?: false
•
•
•
•
•
Protein
Q3UFM8
Organism: Mus musculus/domesticus
Length: 240  
Fragment?: false
•
•
•
•
•
Protein
A0A5F8MQ82
Organism: Mus musculus/domesticus
Length: 385  
Fragment?: true
•
•
•
•
•
Protein
Q3ULG0
Organism: Mus musculus/domesticus
Length: 342  
Fragment?: true
•
•
•
•
•
Protein Domain
IPR012958 | CHD_N
Type: Domain
Description: This entry represents the N-terminal domain of CHD (Chromodomain, Helicase, DNA-binding) proteins. CHD3 and CHD4 belong to the class II subfamily of CHD ATPases, and each is present as a core catalytic subunit in separate NuRD complexes, which regulate chromatin organisation and gene transcription []. CHD5 forms a NuRD-type chromatin remodeling complex and acts as a tumour suppressor []. There are nine members of the Chromodomain, Helicase, DNA-binding (CHD) family. They are characterised by two chromodomains arranged in tandem, N-terminal to the ATPase/helicase domain. Chromodomains are comprised of a β-sheet folded against an α-helix that collectively mediates binding to methyl-lysine residues [].
•
•
•
•
•
Protein Domain
IPR012957 | CHD_C2
Type: Domain
Description: This entry represents the C-terminal domain of CHD (Chromodomain, Helicase, DNA-binding) proteins. CHD3 and CHD4 belong to the class II subfamily of CHD ATPases, and each is present as a core catalytic subunit in separate NuRD complexes, which regulate chromatin organisation and gene transcription []. CHD5 forms a NuRD-type chromatin remodeling complex and acts as a tumour suppressor []. There are nine members of the Chromodomain, Helicase, DNA-binding (CHD) family. They are characterised by two chromodomains arranged in tandem, N-terminal to the ATPase/helicase domain. Chromodomains are comprised of a β-sheet folded against an α-helix that collectively mediates binding to methyl-lysine residues [].
•
•
•
•
•
Publication
23340908 | -
First Author: Allen HF
Year: 2013
Journal: Cell Mol Life Sci
Title: The NuRD architecture.
Volume: 70
Issue: 19
Pages: 3513-24
•
•
•
•
•
Publication
24419087 | -
First Author: Kolla V
Year: 2014
Journal: Cancer Res
Title: Role of CHD5 in human cancers: 10 years later.
Volume: 74
Issue: 3
Pages: 652-8
•
•
•
•
•
Publication
23954449 | -
First Author: Stanley FK
Year: 2013
Journal: Mutat Res
Title: CHD chromatin remodelling enzymes and the DNA damage response.
Volume: 750
Issue: 1-2
Pages: 31-44
•
•
•
•
•
Publication
33859416 | J:308797
First Author: Vinjamur DS
Year: 2021
Journal: Nat Genet
Title: ZNF410 represses fetal globin by singular control of CHD4.
Volume: 53
Issue: 5
Pages: 719-728
•
•
•
•
•
Publication
37285842 | J:337870
First Author: Ferreira ACF
Year: 2023
Journal: Immunity
Title: Neuroprotective protein ADNP-dependent histone remodeling complex promotes T helper 2 immune cell differentiation.
Volume: 56
Issue: 7
Pages: 1468-1484.e7
•
•
•
•
•
Publication
25453762 | J:219298
First Author: Kim JY
Year: 2014
Journal: Mol Cell
Title: Specificity in circadian clock feedback from targeted reconstitution of the NuRD corepressor.
Volume: 56
Issue: 6
Pages: 738-48
•
•
•
•
•
Publication
22531782 | J:184808
First Author: Luijsterburg MS
Year: 2012
Journal: EMBO J
Title: A new non-catalytic role for ubiquitin ligase RNF8 in unfolding higher-order chromatin structure.
Volume: 31
Issue: 11
Pages: 2511-27
•
•
•
•
•
Protein
Q4QQN1
Organism: Mus musculus/domesticus
Length: 368  
Fragment?: false
•
•
•
•
•
Publication
9804427 | J:175129
First Author: Tong JK
Year: 1998
Journal: Nature
Title: Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex.
Volume: 395
Issue: 6705
Pages: 917-21
•
•
•
•
•
Publication
24849318 | J:216320
First Author: Bergs JW
Year: 2014
Journal: PLoS One
Title: Differential expression and sex chromosome association of CHD3/4 and CHD5 during spermatogenesis.
Volume: 9
Issue: 5
Pages: e98203
•
•
•
•
•
Publication
25753662 | J:231640
First Author: Desai MA
Year: 2015
Journal: Nucleic Acids Res
Title: An intrinsically disordered region of methyl-CpG binding domain protein 2 (MBD2) recruits the histone deacetylase core of the NuRD complex.
Volume: 43
Issue: 6
Pages: 3100-13
•
•
•
•
•
Publication
35150568 | J:323014
First Author: Chrysanthou S
Year: 2022
Journal: Nucleic Acids Res
Title: The DNA dioxygenase Tet1 regulates H3K27 modification and embryonic stem cell biology independent of its catalytic activity.
Volume: 50
Issue: 6
Pages: 3169-3189
•
•
•
•
•
Protein
Q9CUI4
Organism: Mus musculus/domesticus
Length: 256  
Fragment?: true
•
•
•
•
•
Protein
A2A8L1
Organism: Mus musculus/domesticus
Length: 1946  
Fragment?: false
•
•
•
•
•
Protein
Q6PDQ2
Organism: Mus musculus/domesticus
Length: 1915  
Fragment?: false
•
•
•
•
•
Protein
Q5DTP7
Organism: Mus musculus/domesticus
Length: 1945  
Fragment?: true
•
•
•
•
•
Protein
E9Q614
Organism: Mus musculus/domesticus
Length: 2021  
Fragment?: false
•
•
•
•
•
Protein
F7C528
Organism: Mus musculus/domesticus
Length: 1886  
Fragment?: true
•
•
•
•
•
Protein
E9PYU4
Organism: Mus musculus/domesticus
Length: 1915  
Fragment?: false
•
•
•
•
•
Protein
E9PYL1
Organism: Mus musculus/domesticus
Length: 1952  
Fragment?: false
•
•
•
•
•
Protein
B1AR17
Organism: Mus musculus/domesticus
Length: 2055  
Fragment?: false
•
•
•
•
•
Protein
E9QAS4
Organism: Mus musculus/domesticus
Length: 1902  
Fragment?: false
•
•
•
•
•
Protein
E9QAS5
Organism: Mus musculus/domesticus
Length: 1922  
Fragment?: false
•
•
•
•
•
Protein
Q8BR71
Organism: Mus musculus/domesticus
Length: 708  
Fragment?: true
•
•
•
•
•
Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom