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Search results 501 to 573 out of 573 for Satb1

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Type Details Score
Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
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Publication
27626380 | J:236599
First Author: Dickinson ME
Year: 2016
Journal: Nature
Title: High-throughput discovery of novel developmental phenotypes.
Volume: 537
Issue: 7621
Pages: 508-514
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Publication
- | J:73065
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
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Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
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Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
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Publication
24952961 | J:215487
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
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Publication
24194600 | J:228563
First Author: Koscielny G
Year: 2014
Journal: Nucleic Acids Res
Title: The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Volume: 42
Issue: Database issue
Pages: D802-9
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Publication
- | J:80155
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
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Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
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Publication
- | J:204739
     
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Protein
D3YZD1
Organism: Mus musculus/domesticus
Length: 154  
Fragment?: true
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Publication
32669713 | J:292119
First Author: Li Z
Year: 2020
Journal: Nature
Title: N6-methyladenine in DNA antagonizes SATB1 in early development.
Volume: 583
Issue: 7817
Pages: 625-630
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Protein
Q60611
Organism: Mus musculus/domesticus
Length: 764  
Fragment?: false
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Publication
31543366 | J:286177
First Author: Riessland M
Year: 2019
Journal: Cell Stem Cell
Title: Loss of SATB1 Induces p21-Dependent Cellular Senescence in Post-mitotic Dopaminergic Neurons.
Volume: 25
Issue: 4
Pages: 514-530.e8
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Protein
D3YU76
Organism: Mus musculus/domesticus
Length: 21  
Fragment?: true
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Publication
19103759 | -
First Author: Purbey PK
Year: 2009
Journal: Mol Cell Biol
Title: Acetylation-dependent interaction of SATB1 and CtBP1 mediates transcriptional repression by SATB1.
Volume: 29
Issue: 5
Pages: 1321-37
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Publication
10373541 | -
First Author: Liu J
Year: 1999
Journal: Mol Cell Biol
Title: Homeoproteins CDP and SATB1 interact: potential for tissue-specific regulation.
Volume: 19
Issue: 7
Pages: 4918-26
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Publication
20884053 | J:167090
First Author: Yao X
Year: 2010
Journal: Mol Immunol
Title: The L2a element is a mouse CD8 silencer that interacts with MAR-binding proteins SATB1 and CDP.
Volume: 48
Issue: 1-3
Pages: 153-63
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Publication
29772444 | -
 
First Author: Sunkara KP
Year: 2018
Journal: Biomed Pharmacother
Title: Functional relevance of SATB1 in immune regulation and tumorigenesis.
Volume: 104
Pages: 87-93
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Publication
9218488 | J:41712
First Author: Banan M
Year: 1997
Journal: J Biol Chem
Title: Interaction of the nuclear matrix-associated region (MAR)-binding proteins, SATB1 and CDP/Cux, with a MAR element (L2a) in an upstream regulatory region of the mouse CD8a gene.
Volume: 272
Issue: 29
Pages: 18440-52
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Publication
9792700 | J:50916
First Author: Chattopadhyay S
Year: 1998
Journal: J Biol Chem
Title: A nuclear matrix attachment region upstream of the T cell receptor beta gene enhancer binds Cux/CDP and SATB1 and modulates enhancer-dependent reporter gene expression but not endogenous gene expression.
Volume: 273
Issue: 45
Pages: 29838-46
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Allele
Satb1<em1Smoc> | MGI:7292168
Name: special AT-rich sequence binding protein 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Conditional ready, No functional change
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Publication
14701874 | -
First Author: Dobreva G
Year: 2003
Journal: Genes Dev
Title: SUMO modification of a novel MAR-binding protein, SATB2, modulates immunoglobulin mu gene expression.
Volume: 17
Issue: 24
Pages: 3048-61
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Publication
16630892 | -
First Author: Pavan Kumar P
Year: 2006
Journal: Mol Cell
Title: Phosphorylation of SATB1, a global gene regulator, acts as a molecular switch regulating its transcriptional activity in vivo.
Volume: 22
Issue: 2
Pages: 231-43
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Publication
28139846 | -
First Author: Zarate YA
Year: 2017
Journal: Clin Genet
Title: Genotype and phenotype in 12 additional individuals with SATB2-associated syndrome.
Volume: 92
Issue: 4
Pages: 423-429
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Publication
27774744 | -
First Author: Zarate YA
Year: 2017
Journal: Am J Med Genet A
Title: SATB2-associated syndrome: Mechanisms, phenotype, and practical recommendations.
Volume: 173
Issue: 2
Pages: 327-337
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Publication
29306014 | -
 
First Author: Frömberg A
Year: 2018
Journal: Cancer Lett
Title: The Special AT-rich Sequence Binding Protein 1 (SATB1) and its role in solid tumors.
Volume: 417
Pages: 96-111
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Protein Domain
IPR039673 | SATB1/SATB2
Type: Family
Description: This entry includes SATB1/2 from animals. SATB1 is a global gene regulator that acts as a "docking site"for several chromatin remodeling enzymes and recruits corepressors (HDACs) or coactivators (HATs) directly to promoters []. SATB1 can bind DNA specifically to the consensus SATB1-binding sequence (CSBS) consisting of two 5'-TAATA-3' half-sites that are arranged as inverted repeats flanking a central cytosine or guanine. It can also bind DNA non-specifically []. SATB1 has been shown to bind to the nuclear matrix attachment regions (MARs) of the immunoglobulin heavy chain intronic enhancer [], while SATB2 has been shown to bind to the MARs of the endogenous immunoglobulin micro locus in pre-B cells and enhances gene expression [].SATB1 is an identified oncogene, its increased expression is associated with poor prognosis in many cancers []. Mutations in the SATB2 gene cause SATB2-associated syndrome (SAS), characterised by developmental delay/intellectual disability with absent or limited speech development, craniofacial abnormalities, behavioral problems, dysmorphic features, and palatal and dental abnormalities [, ].
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Protein Domain
IPR038216 | SATB_CUTL_sf
Type: Homologous_superfamily
Description: This superfamily represents a domain found in SATB (special AT-rich sequence-binding) proteins that are global chromatin organisers and gene expression regulators essential for T-cell development and breast cancer tumour growth and metastasis. The N terminus of SATB1 (residues 90-204) is made up of ULD and CUTL domains. This entry represents the CUTL (CUT repeat-like) domain, which shares structure similarity with the CUT1 domain and has the evolutionarily conserved amino acids involved in CUT1 DNA binding [, ]. This domain is essential for the contact between DNA and SATB1.
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Protein
H3BJX4
Organism: Mus musculus/domesticus
Length: 104  
Fragment?: true
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Publication
28078709 | J:269911
First Author: Sweeney NT
Year: 2019
Journal: J Comp Neurol
Title: Expression of transcription factors divides retinal ganglion cells into distinct classes.
Volume: 527
Issue: 1
Pages: 225-235
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Publication
30643266 | J:282453
First Author: Konopacki C
Year: 2019
Journal: Nat Immunol
Title: Transcription factor Foxp1 regulates Foxp3 chromatin binding and coordinates regulatory T cell function.
Volume: 20
Issue: 2
Pages: 232-242
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Protein
Q8VI24
Organism: Mus musculus/domesticus
Length: 733  
Fragment?: false
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Protein
E9PVB7
Organism: Mus musculus/domesticus
Length: 795  
Fragment?: false
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Protein
Q546B3
Organism: Mus musculus/domesticus
Length: 733  
Fragment?: false
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Publication
25124042 | -
First Author: Wang Z
Year: 2014
Journal: J Biol Chem
Title: Crystal structure of the ubiquitin-like domain-CUT repeat-like tandem of special AT-rich sequence binding protein 1 (SATB1) reveals a coordinating DNA-binding mechanism.
Volume: 289
Issue: 40
Pages: 27376-85
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Publication
10950932 | J:64119
First Author: Chattopadhyay S
Year: 2000
Journal: Genomics
Title: SMAR1, a novel, alternatively spliced gene product, binds the Scaffold/Matrix-associated region at the T cell receptor beta locus.
Volume: 68
Issue: 1
Pages: 93-6
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Publication
34244292 | J:310075
First Author: Antonio Urrutia G
Year: 2021
Journal: Genes Dev
Title: ZFP451-mediated SUMOylation of SATB2 drives embryonic stem cell differentiation.
Volume: 35
Issue: 15-16
Pages: 1142-1160
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Publication
23747796 | J:207061
First Author: Stahl J
Year: 2013
Journal: Matrix Biol
Title: Leucine rich amelogenin peptide alters ameloblast differentiation in vivo.
Volume: 32
Issue: 7-8
Pages: 432-42
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Publication
21799768 | J:176261
First Author: Son JS
Year: 2011
Journal: PLoS One
Title: Enhanced chromatin accessibility and recruitment of JUNB mediate the sustained IL-4 expression in NFAT1 deficient T helper 2 cells.
Volume: 6
Issue: 7
Pages: e22042
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Publication
30171602 | J:269342
First Author: Liu J
Year: 2019
Journal: Immunology
Title: Deceleration of glycometabolism impedes IgG-producing B-cell-mediated tumor elimination by targeting SATB1.
Volume: 156
Issue: 1
Pages: 56-68
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Protein
H3BKH3
Organism: Mus musculus/domesticus
Length: 615  
Fragment?: false
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
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Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
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