|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 1301 to 1349 out of 1349 for Hnf4a

<< First    < Previous  |  Next >    Last >>
0.022s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
HT Experiment
GSE112828 | Effects of Hnf4a deletion in the nephron lineage during kidney development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
HT Experiment
E-GEOD-57712 | TAF4 promotes pre-initiation complex formation and HNF4A occupancy of regulatory elements required to activation post-natal gene expression programme in hepatocytes (RNA-seq)
Series Id: GSE57712
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
HT Experiment
GSE193506 | Transcriptomic profiling of Hnf4a liver knockout mice (AlbCre-Hnf4a fl/fl) vs control (Hnf4a fl/fl) mice.
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
HT Experiment
E-GEOD-3126 | Transcription profiling of wild type mouse livers and livers from hepatocyte nuclear factor 4alpha deficient mice to study the role of HNF4a in hepatogenesis
Series Id: GSE3126
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5609005
Assay Type: Immunohistochemistry
Annotation Date: 2015-01-06
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1654815
Pattern: Regionally restricted
Stage: TS15
Assay Id: MGI:5609026
Age: embryonic day 9.5
Image: 1C
Note: Expression was detected in Hnf4a positive epithelial hepatoblasts in gut endoderm and forming liver bud.
Specimen Label: 1C
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:1314839
Assay Type: Immunohistochemistry
Annotation Date: 2022-11-01
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3285617
Pattern: Regionally restricted
Stage: TS17
Assay Id: MGI:7378256
Age: embryonic day 10.5
Image: 5A'
Note: Expression was detected in the coelomic mesothelium adjacent to Hnf4a and Gata4 staining.
Specimen Label: 5A'
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5609005
Assay Type: Immunohistochemistry
Annotation Date: 2015-01-06
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1684715
Pattern: Regionally restricted
Stage: TS15
Assay Id: MGI:5609026
Age: embryonic day 9.5
Image: 1C
Note: Expression was detected in Hnf4a positive epithelial hepatoblasts in gut endoderm and forming liver bud.
Specimen Label: 1C
Detected: true
Specimen Num: 1
•
•
•
•
•
Allele
Hnf4a<tm1.1Gonz> | MGI:2183520
Name: hepatic nuclear factor 4, alpha; targeted mutation 1.1, Frank J Gonzalez
Allele Type: Targeted
Attribute String: Conditional ready, No functional change
•
•
•
•
•
Genotype
Genotype
Symbol: Hnf4a/Hnf4a Tg(Ins2-cre)25Mgn/?
Background: involves: 129X1/SvJ * C57BL/6 * DBA
Zygosity: cn
Has Mutant Allele: true
•
•
•
•
•
DO Term
DOID:0111099 | maturity-onset diabetes of the young type 1
•
•
•
•
•
DO Term
DOID:0080760 | Fanconi renotubular syndrome 4
•
•
•
•
•
Allele
Gt(ROSA)26Sor<tm1(Hnf4a_i2)Vda> | MGI:7491659
Name: gene trap ROSA 26, Philippe Soriano; targeted mutation 1, Valentin David
Allele Type: Targeted
Attribute String: Conditional ready, Inserted expressed sequence
•
•
•
•
•
HT Sample
GSE11759GSM297817
Organism Name: mouse, laboratory
Sex: Female
Age: postnatal month 12
Stage: 28
Structure . Name: colon
Notes: RNA isolated from proximal colon; control animals might have carried the cre allele and been lox/+ at the Hnf4a locus
Curation Status: Curated
•
•
•
•
•
HT Sample
GSE11759GSM297818
Organism Name: mouse, laboratory
Sex: Female
Age: postnatal month 12
Stage: 28
Structure . Name: colon
Notes: RNA isolated from proximal colon; control animals might have carried the cre allele and been lox/+ at the Hnf4a locus
Curation Status: Curated
•
•
•
•
•
HT Sample
GSE11759GSM297819
Organism Name: mouse, laboratory
Sex: Female
Age: postnatal month 12
Stage: 28
Structure . Name: colon
Notes: RNA isolated from proximal colon; control animals might have carried the cre allele and been lox/+ at the Hnf4a locus
Curation Status: Curated
•
•
•
•
•
Allele
Hnf4a<tm1Smoc> | MGI:7275229
Name: hepatic nuclear factor 4, alpha; targeted mutation 1, Shanghai Model Organisms Center
Allele Type: Targeted
Attribute String: Conditional ready, No functional change
•
•
•
•
•
Allele
Hnf4a<em1(dre/ERT2)Bzsh> | MGI:7444938
Name: hepatic nuclear factor 4, alpha; endonuclease-mediated mutation 1, Bin Zhou
Allele Type: Endonuclease-mediated
Attribute String: Inducible, Recombinase
•
•
•
•
•
Strain
MGI:6354861 | C57BL/6J-Hnf4a<tm1Smoc>/Smoc
Attribute String: coisogenic, mutant strain, targeted mutation
•
•
•
•
•
HT Experiment
E-GEOD-20968 | Hepatocyte-nuclear-factor-4a promotes gut neoplasia in mice and protects against the production of reactive oxygen species
Series Id: GSE20968
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
HT Experiment
E-GEOD-11759 | Transcription profiling of mouse conditional intestinal epithelial Hnf4Ialpha knockout to investigate the role of HNF4alpha in the adult colon
Series Id: GSE11759
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
Genotype
Genotype
Symbol: Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Hnf4a/Hnf4a<+>
Background: involves: 129S6/SvEvTac * C57BL/6NCrl
Zygosity: cn
Has Mutant Allele: true
•
•
•
•
•
HT Experiment
E-MTAB-6423 | Renal transcriptome profiling by RNAseq in Bicc1 WT and KO mice
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
Publication
26923201 | J:310889
First Author: Song G
Year: 2016
Journal: Cell Stem Cell
Title: Direct Reprogramming of Hepatic Myofibroblasts into Hepatocytes In Vivo Attenuates Liver Fibrosis.
Volume: 18
Issue: 6
Pages: 797-808
•
•
•
•
•
Publication
22904186 | J:189921
First Author: Liu Q
Year: 2012
Journal: Proc Natl Acad Sci U S A
Title: Adiponectin regulates expression of hepatic genes critical for glucose and lipid metabolism.
Volume: 109
Issue: 36
Pages: 14568-73
•
•
•
•
•
Publication
35830798 | J:326827
First Author: Yin Q
Year: 2022
Journal: Cell Rep
Title: RPA1 controls chromatin architecture and maintains lipid metabolic homeostasis.
Volume: 40
Issue: 2
Pages: 111071
•
•
•
•
•
HT Experiment
GSE137066 | Bookmarking by "non-pioneer" transcription factors during liver development establishes competence for future gene activation
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
HT Experiment
E-GEOD-38144 | Adiponectin regulates expression of hepatic genes critical for glucose and lipid metabolism
Series Id: GSE38144
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
HT Experiment
GSE236256 | Enhancer grammar of liver cell types and hepatocyte zonation states [multiome_validation]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
•
•
•
•
•
HT Experiment
GSE218465 | Enhancer grammar of liver cell types and hepatocyte zonation states [scRNA-seq]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
•
•
•
•
•
HT Experiment
GSE218468 | Enhancer grammar of liver cell types and hepatocyte zonation states [multiome]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
•
•
•
•
•
Publication
28255028 | J:263735
First Author: Guo M
Year: 2017
Journal: EMBO Mol Med
Title: Gene signature driving invasive mucinous adenocarcinoma of the lung.
Volume: 9
Issue: 4
Pages: 462-481
•
•
•
•
•
Publication
38446901 | J:347026
First Author: Clotet-Freixas S
Year: 2024
Journal: Sci Transl Med
Title: Sex differences in kidney metabolism may reflect sex-dependent outcomes in human diabetic kidney disease.
Volume: 16
Issue: 737
Pages: eabm2090
•
•
•
•
•
Publication
34973414 | J:319851
First Author: Thymiakou E
Year: 2022
Journal: Biochim Biophys Acta Mol Cell Biol Lipids
Title: Intestine-specific ablation of the Hepatocyte Nuclear Factor 4a (Hnf4a) gene in mice has minimal impact on serum lipids and ileum gene expression profile due to upregulation of its paralog Hnf4g.
Volume: 1867
Issue: 3
Pages: 159108
•
•
•
•
•
Publication
26857093 | J:321786
First Author: Wu W
Year: 2016
Journal: Hepatology
Title: Genome-wide association study in mice identifies loci affecting liver-related phenotypes including Sel1l influencing serum bile acids.
Volume: 63
Issue: 6
Pages: 1943-56
•
•
•
•
•
Publication
21386911 | J:171050
First Author: Thiagarajan RD
Year: 2011
Journal: PLoS One
Title: Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways.
Volume: 6
Issue: 2
Pages: e17286
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom