|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 601 to 687 out of 687 for Uhrf1

<< First    < Previous  |  Next >    Last >>
0.051s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
•
•
•
•
•
Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
•
•
•
•
•
Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
•
•
•
•
•
Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
•
•
•
•
•
Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
•
•
•
•
•
Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
•
•
•
•
•
Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
•
•
•
•
•
Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
•
•
•
•
•
Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
•
•
•
•
•
Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
•
•
•
•
•
Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Publication
18772891 | -
First Author: Arita K
Year: 2008
Journal: Nature
Title: Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism.
Volume: 455
Issue: 7214
Pages: 818-21
•
•
•
•
•
Publication
18772888 | -
First Author: Hashimoto H
Year: 2008
Journal: Nature
Title: The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix.
Volume: 455
Issue: 7214
Pages: 826-9
•
•
•
•
•
HT Experiment
GSE77941 | RNA sequencing of WT and Uhrf1 KO iNKT cells
Series Id: E-GEOD-77941
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Protein
E9Q5Y5
Organism: Mus musculus/domesticus
Length: 146  
Fragment?: true
•
•
•
•
•
Protein
A0A3B2WCP2
Organism: Mus musculus/domesticus
Length: 123  
Fragment?: true
•
•
•
•
•
Protein
A0A3B2WAV8
Organism: Mus musculus/domesticus
Length: 150  
Fragment?: true
•
•
•
•
•
Protein
B2KF50
Organism: Mus musculus/domesticus
Length: 1429  
Fragment?: false
•
•
•
•
•
Protein
A0A3B2WCQ2
Organism: Mus musculus/domesticus
Length: 177  
Fragment?: true
•
•
•
•
•
Protein
A0A3B2W3R7
Organism: Mus musculus/domesticus
Length: 108  
Fragment?: true
•
•
•
•
•
Publication
37380646 | J:337532
First Author: Wang Y
Year: 2023
Journal: Cell Death Dis
Title: UHRF1 inhibition epigenetically reprograms cancer stem cells to suppress the tumorigenic phenotype of hepatocellular carcinoma.
Volume: 14
Issue: 6
Pages: 381
•
•
•
•
•
HT Experiment
GSE84547 | Loss of Uhrf1 in neural stem cells leads to activation of retroviral elements and delayed neurodegeneration [E16VZ]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
HT Experiment
GSE84545 | Loss of Uhrf1 in neural stem cells leads to activation of retroviral elements and delayed neurodegeneration [E16]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
HT Experiment
GSE84548 | Loss of Uhrf1 in neural stem cells leads to activation of retroviral elements and delayed neurodegeneration [P5]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Interaction Experiment
De Vos M (2014)
Description: Poly(ADP-ribose) polymerase 1 (PARP1) associates with E3 ubiquitine-protein ligase UHRF1 and modulates UHRF1 biological functions.
•
•
•
•
•
Publication
22411829 | J:182217
First Author: Ma H
Year: 2012
Journal: Proc Natl Acad Sci U S A
Title: M phase phosphorylation of the epigenetic regulator UHRF1 regulates its physical association with the deubiquitylase USP7 and stability.
Volume: 109
Issue: 13
Pages: 4828-33
•
•
•
•
•
Publication
12084726 | -
First Author: Muto M
Year: 2002
Journal: J Biol Chem
Title: Targeted disruption of Np95 gene renders murine embryonic stem cells hypersensitive to DNA damaging agents and DNA replication blocks.
Volume: 277
Issue: 37
Pages: 34549-55
•
•
•
•
•
Publication
8634372 | -
First Author: Muto M
Year: 1995
Journal: Cell Prolif
Title: The characterization of the monoclonal antibody Th-10a, specific for a nuclear protein appearing in the S phase of the cell cycle in normal thymocytes and its unregulated expression in lymphoma cell lines.
Volume: 28
Issue: 12
Pages: 645-57
•
•
•
•
•
Publication
11161719 | -
First Author: Miura M
Year: 2001
Journal: Exp Cell Res
Title: Dynamic changes in subnuclear NP95 location during the cell cycle and its spatial relationship with DNA replication foci.
Volume: 263
Issue: 2
Pages: 202-8
•
•
•
•
•
Publication
12058012 | -
First Author: Bonapace IM
Year: 2002
Journal: J Cell Biol
Title: Np95 is regulated by E1A during mitotic reactivation of terminally differentiated cells and is essential for S phase entry.
Volume: 157
Issue: 6
Pages: 909-14
•
•
•
•
•
Publication
15361834 | -
First Author: Unoki M
Year: 2004
Journal: Oncogene
Title: ICBP90, an E2F-1 target, recruits HDAC1 and binds to methyl-CpG through its SRA domain.
Volume: 23
Issue: 46
Pages: 7601-10
•
•
•
•
•
Publication
20026581 | -
First Author: Rottach A
Year: 2010
Journal: Nucleic Acids Res
Title: The multi-domain protein Np95 connects DNA methylation and histone modification.
Volume: 38
Issue: 6
Pages: 1796-804
•
•
•
•
•
Publication
19077538 | -
First Author: Hashimoto H
Year: 2009
Journal: Epigenetics
Title: UHRF1, a modular multi-domain protein, regulates replication-coupled crosstalk between DNA methylation and histone modifications.
Volume: 4
Issue: 1
Pages: 8-14
•
•
•
•
•
Interaction Experiment
Liu X (2013)
Description: UHRF1 targets DNMT1 for DNA methylation through cooperative binding of hemi-methylated DNA and methylated H3K9.
•
•
•
•
•
Interaction Experiment
Ferry L (2017)
Description: Methylation of DNA Ligase 1 by G9a/GLP Recruits UHRF1 to Replicating DNA and Regulates DNA Methylation.
•
•
•
•
•
Interaction Experiment
Smets M (2017)
Description: DNMT1 mutations found in HSANIE patients affect interaction with UHRF1 and neuronal differentiation.
•
•
•
•
•
Interaction Experiment
Foster BM (2018)
Description: Critical Role of the UBL Domain in Stimulating the E3Ubiquitin Ligase Activity of UHRF1 toward Chromatin.
•
•
•
•
•
Interaction Experiment
Hata K (2022)
Description: Structural basis for the unique multifaceted interaction of DPPA3 with the UHRF1 PHD finger.
•
•
•
•
•
Interaction Experiment
Oh YM (2018)
Description: Epigenetic regulator UHRF1 inactivates REST and growth suppressor gene expression via DNA methylation to promote axon regeneration.
•
•
•
•
•
Publication
24782312 | -
First Author: De Vos M
Year: 2014
Journal: J Biol Chem
Title: Poly(ADP-ribose) polymerase 1 (PARP1) associates with E3 ubiquitin-protein ligase UHRF1 and modulates UHRF1 biological functions.
Volume: 289
Issue: 23
Pages: 16223-38
•
•
•
•
•
Publication
28803780 | -
First Author: Ferry L
Year: 2017
Journal: Mol Cell
Title: Methylation of DNA Ligase 1 by G9a/GLP Recruits UHRF1 to Replicating DNA and Regulates DNA Methylation.
Volume: 67
Issue: 4
Pages: 550-565.e5
•
•
•
•
•
Publication
28334952 | -
First Author: Smets M
Year: 2017
Journal: Hum Mol Genet
Title: DNMT1 mutations found in HSANIE patients affect interaction with UHRF1 and neuronal differentiation.
Volume: 26
Issue: 8
Pages: 1522-1534
•
•
•
•
•
Publication
30392929 | -
First Author: Foster BM
Year: 2018
Journal: Mol Cell
Title: Critical Role of the UBL Domain in Stimulating the E3 Ubiquitin Ligase Activity of UHRF1 toward Chromatin.
Volume: 72
Issue: 4
Pages: 739-752.e9
•
•
•
•
•
Publication
36420895 | -
First Author: Hata K
Year: 2022
Journal: Nucleic Acids Res
Title: Structural basis for the unique multifaceted interaction of DPPA3 with the UHRF1 PHD finger.
Volume: 50
Issue: 21
Pages: 12527-12542
•
•
•
•
•
Publication
30530687 | -
First Author: Oh YM
Year: 2018
Journal: Proc Natl Acad Sci U S A
Title: Epigenetic regulator UHRF1 inactivates REST and growth suppressor gene expression via DNA methylation to promote axon regeneration.
Volume: 115
Issue: 52
Pages: E12417-E12426
•
•
•
•
•
Protein Coding Gene
MGI:3041238 | Bltp3a
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Domain
IPR021991 | TTD_dom
Type: Domain
Description: TTD, tandem tudor domain within UHRF1 preferentially binds H3 histone tails trimethylated at Lys-9. It specifically recognises H3 tail peptides with the heterochromatin-associated modification state of trimethylated lysine 9 and unmodified lysine 4 (H3K4me0/K9me3) [, ].
•
•
•
•
•
Protein Coding Gene
MGI:2442888 | Bltp3b
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
HT Experiment
GSE74938 | RNA-seq profiling of mouse PGC (Mus musculus)
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Protein
Q3T995
Organism: Mus musculus/domesticus
Length: 202  
Fragment?: false
•
•
•
•
•
Publication
28402695 | J:262684
First Author: Liu Y
Year: 2017
Journal: Epigenetics
Title: UHRF2 regulates local 5-methylcytosine and suppresses spontaneous seizures.
Volume: 12
Issue: 7
Pages: 551-560
•
•
•
•
•
Publication
35479397 | J:337995
First Author: Aibara D
Year: 2022
Journal: iScience
Title: Gene repression through epigenetic modulation by PPARA enhances hepatocellular proliferation.
Volume: 25
Issue: 5
Pages: 104196
•
•
•
•
•
Publication
27554592 | J:241452
 
First Author: Zhao Q
Year: 2016
Journal: Nat Commun
Title: Dissecting the precise role of H3K9 methylation in crosstalk with DNA maintenance methylation in mammals.
Volume: 7
Pages: 12464
•
•
•
•
•
Publication
27237052 | J:253012
First Author: von Meyenn F
Year: 2016
Journal: Mol Cell
Title: Impairment of DNA Methylation Maintenance Is the Main Cause of Global Demethylation in Naive Embryonic Stem Cells.
Volume: 62
Issue: 6
Pages: 848-861
•
•
•
•
•
Publication
31231040 | J:281277
First Author: Wang S
Year: 2019
Journal: Dev Cell
Title: Epigenetic Compensation Promotes Liver Regeneration.
Volume: 50
Issue: 1
Pages: 43-56.e6
•
•
•
•
•
Publication
21598301 | J:183195
First Author: Pichler G
Year: 2011
Journal: J Cell Biochem
Title: Cooperative DNA and histone binding by Uhrf2 links the two major repressive epigenetic pathways.
Volume: 112
Issue: 9
Pages: 2585-93
•
•
•
•
•
Publication
32215983 | J:288267
First Author: Zhou Q
Year: 2020
Journal: Mol Reprod Dev
Title: Deletion of BAF250a affects oocyte epigenetic modifications and embryonic development.
Volume: 87
Issue: 5
Pages: 550-564
•
•
•
•
•
Publication
38453481 | J:346894
First Author: Giaccari C
Year: 2024
Journal: Genes Dev
Title: A maternal-effect Padi6 variant causes nuclear and cytoplasmic abnormalities in oocytes, as well as failure of epigenetic reprogramming and zygotic genome activation in embryos.
Volume: 38
Issue: 3-4
Pages: 131-150
•
•
•
•
•
Protein
Q7TMI3
Organism: Mus musculus/domesticus
Length: 803  
Fragment?: false
•
•
•
•
•
Publication
19144319 | J:143718
First Author: Trost M
Year: 2009
Journal: Immunity
Title: The phagosomal proteome in interferon-gamma-activated macrophages.
Volume: 30
Issue: 1
Pages: 143-54
•
•
•
•
•
Publication
17242355 | -
First Author: Villén J
Year: 2007
Journal: Proc Natl Acad Sci U S A
Title: Large-scale phosphorylation analysis of mouse liver.
Volume: 104
Issue: 5
Pages: 1488-93
•
•
•
•
•
Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
•
•
•
•
•
Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
•
•
•
•
•
Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom