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Category: HTExperiment
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Type Details Score
HT Experiment
E-GEOD-74905 | Effects of vitamin A on Ventricular myocardium gene expression [right ventricle]
Series Id: GSE74905
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-74904 | Effects of vitamin A on ventricular myocardium gene expression [left ventricle]
Series Id: GSE74904
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE130976 | A stem cell-driven lymphoangiogenic switch
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-MTAB-622 | Global gene expression in P0 Gtf2ird1-/- mouse brains
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-51034 | RSK2 is a modulator of craniofacial development
Series Id: GSE51034
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE128854 | A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment. [scRNA-Seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE218932 | Transcriptomic differences in livers from pubertal mice fed the AIN93G standard diet or a high-fat diet
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE156836 | A Thalamic Orphan Receptor Drives Variability in Short Term Memory
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE94982 | A spatio-temporal translatome of mouse tissue development
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE27243 | A Transcriptomic Atlas of Mouse Neocortical Layers
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-15419 | Mthfd1 is a modifier of intestinal carcinogenesis
Series Id: GSE15419
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-21278 | A genomic atlas of mouse hypothalamic development
Series Id: GSE21278
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE131181 | A Cellular Atlas of Pitx2-Dependent Cardiac Development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-38737 | Genome-wide expression profiling analysis of a SMC6 mutant mouse model
Series Id: GSE38737
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE176171 | A single cell atlas of human adipose tissue
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE111107 | A single-cell transcriptome atlas of mouse glomerulus
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-MEXP-3504 | Transcription profiling by array of liver from proestrus and metestrus mice to investigate ER control of liver metabolic function
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE190947 | Hepatocyte RNA-seq analysis in liver-specific XBP1 knockout mice fed a high fat sugar diet
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-40132 | ALKBH5 is a New Mammalian RNA Demethylase
Series Id: GSE40132
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-56852 | Gene expression profiling from pooled samples of subcutaneous adipose tissue of NAPE-WT or NAPE-KO mice fed either with a control diet or a high-fat diet
Series Id: GSE56852
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE140532 | Ctcf Haploinsufficiency Mediates Intron Retention in A Tissue-specific Manner
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE134355 | Construction of A Human Cell Landscape by Single-cell mRNA-seq
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE165063 | A Single Cell Atlas of Alveolar Development
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-MEXP-2428 | Transcription profiling of mouse spinal cord from a mouse model of severe spinal muscular atrophy
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE117784 | Reprogram-Seq: A platform for single-cell combinatorial reprogramming [I]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE117788 | Reprogram-Seq: A platform for single-cell combinatorial reprogramming [IV]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-33064 | Expression data from a Tbx1 gene allelic series
Series Id: GSE33064
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-21836 | Tob1 is a Constitutively Expressed Repressor of Liver Regeneration
Series Id: GSE21836
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE118083 | A Time-resolved Multi-omic Atlas of the Developing Mouse Stomach
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE202094 | A Missense Mutation in Kcnc3 Causes Hippocampal Learning Deficits in Mice
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-4193 | Transcription profiling of mouse germline during spermatogenesis reveals X and Y occupy a novel compartment in the post-meiotic spermatid and adopt a non-Rabl configuration
Series Id: GSE4193
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-19780 | A novel approach to investigate tissue-specific trinucleotide repeat instability
Series Id: GSE19780
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE150989 | A Specific Neuroligin3-alphaNeurexin1Signaling Regulates GABAergic Synaptic Function in Mouse Hippocampus
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-37150 | Alkbh1/Tzfp Repress a Non-Repeat piRNA Cluster in Pachytene Spermatocytes
Series Id: GSE37150
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-70194 | Glis3 plays a crucial role in spermatogenesis [848_827]
Series Id: GSE70194
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE68628 | ABCC5 functions as a transporter of glutamate conjugates and analogs
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-59956 | Global Identification of Protein PTMs in a Single-pass Database Search
Series Id: GSE59956
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-14605 | mRNA-Seq Whole Transcriptome Analysis of a Single Cell
Series Id: GSE14605
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE75931 | A spatio-temporal characterization of the transcriptional landscape of epidermal development
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE179163 | The effects of MuRF1 knockout, sex, and a high fat diet consumption on gastrocnemius muscle transcriptomics.
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-18305 | Liver gene expression from chromogranin A knockout mice (Mahapatra et al. 2005) vs. wild-type mice
Series Id: GSE18305
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-18304 | Transcription profiling by array of adreanal gland samples from chromogranin A knockout mice vs wild-type controls
Series Id: GSE18304
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-16438 | Array profiling of dystrophin-deficient mice with a secondary glycosylation defect
Series Id: GSE16438
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-26486 | Simple and efficient transcriptome profiling from a single embryo
Series Id: GSE26486
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE117750 | TBX1-FGF11 as a novel axis governing limb development
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE99590 | A ROLE FOR DYSTONIA-ASSOCIATED GENES IN SPINAL GABAERGIC INTERNEURON CIRCUITRY
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE136750 | A Second Heart Field-derived vasculogenic niche contributes to cardiac lymphatics
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE207447 | Natural history of a mouse model of X-linked myotubular myopathy
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE152715 | Cell-type-specific transcriptomic perturbations in a mouse model of HNRNPU haploinsufficiency
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE103789 | A novel role for Lyl1 in primitive erythropoiesis
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE233793 | Pou3f1 orchestrates a gene regulatory network controlling contralateral retinogeniculate projections [RNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-58712 | Cyclin C-CDK3/8/19 kinases play a tumor-suppressive role in vivo
Series Id: GSE58712
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE65960 | A Grhl2-dependent gene network controls trophoblast branching morphogenesis [array]
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE95108 | miR-205 is a critical regulator of lacrimal gland development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-53834 | Gene expression profiles in the liver of AIM+/+ and AIM-/- mice fed a high-fat diet
Series Id: GSE53834
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE178217 | Systematic identification of cell fate regulatory programs using a single-cell atlas of mouse development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-40486 | Zbtb16 Has a Role in Brown Adipocyte Bioenergetics
Series Id: GSE40486
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-31692 | A PPARgamma-FGF1 axis is required for adaptive adipose remodeling
Series Id: GSE31692
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE66345 | A Circuit Mechanism for Differentiating Positive and Negative Associations
Series Id: E-GEOD-66345
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-38573 | Expression data from cerebrum in a spontaneous mutant mouse, laggard
Series Id: GSE38573
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE132034 | A Time-resolved Multi-omic Atlas of the Developing Mouse Liver
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE137721 | RNA-seq analyses of cochleae from a mouse model of DFNB39
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE113073 | Transcription Factor SOX30 Is a Key Regulator of Mouse Spermiogenesis
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-4011 | A Restricted Role for Sperm-borne MicroRNAs in Mammalian Fertilization
Series Id: GSE4011
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE81216 | SpermBase - A database for sperm-borne RNA contents
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE135181 | A cell fitness selection model for neuronal survival during development
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE179888 | A time-resolved transcriptome landscape of the developing mouse ovary
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE121438 | Lineage-specific super-enhancer activates genes in a promoter-selective manner
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE151985 | A single cell transcriptional atlas of early synovial joint development
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE227295 | Mitochondrial protein import clogging as a mechanism of disease
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE123913 | A stem cell-driven lymphoangiogenic switch coordinates tissue regeneration
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE138511 | A complex regulatory landscape involved in the development of external genitals [RNA-Seq]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE219252 | Bulk RNA-seq of eyes isolated from wildtype and Stra6 knockout mice maintained on either a vitamin A sufficient or deficient diet
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-47781 | ENU mutagenesis derived Ednray129F-/- mice as a new model for human velocardiofacial syndrome/DiGeorg syndrome (VCFS/DGS)
Series Id: GSE47781
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-MTAB-4163 | Transgenic expression of BEN, a member of TFII-I family, in various murine adipose tissues
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-MTAB-3735 | Microarray analysis of newborn mice carrying a mutation in miR-96, compared to wildtype sex-matched littermate controls
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-40428 | ENU derived mouse line AEA001: A model for osteoporosis carrying a mutation in Ednra
Series Id: GSE40428
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE145283 | Oocytes, a single cell and a tissue
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE70288 | A transcriptome atlas of embryonic skin
Series Id: E-GEOD-70288
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE72759 | Defining the consequences of genetic variation on a proteome-wide scale
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE169262 | Identification of a modular super-enhancer in murine retinal development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-76483 | Simultaneous profiling of transcriptome and DNA methylome from a single cell
Series Id: GSE76483
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE62039 | Defining a mesenchymal progenitor niche at single cell resolution
Series Id: E-GEOD-62039
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE15232 | A Regulatory Pathway Involving Notch1/beta-Catenin/Isl1 Determines Cardiac Progenitor Cell Fate
Series Id: E-GEOD-15232
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-56430 | HIC2 is a novel dosage-dependent regulator of cardiac development within the distal 22q11 deletion syndrome region
Series Id: GSE56430
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE121603 | Prenatal Bisphenol A Exposure in Mice Induces Multi-tissue Multi-omics Disruptions Linking to Cardiometabolic Disorders (RNA-Seq)
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-17986 | Alternative splicing and gene expression in a mouse model of myotonic dystrophy
Series Id: GSE17986
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-39447 | Mutations in BCKD-kinase lead to a potentially treatable form of autism with epilepsy
Series Id: GSE39447
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE183673 | Pancreas agenesis mutations disrupt a lead enhancer controlling a developmental enhancer cluster
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE201182 | ELAC2 is a prostate cancer rheostat that regulates nuclear and mitochondrial RNA metabolism (RNA-Seq I)
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE74804 | The metabolic response to a high-fat diet reveals obesity-prone and -resistant phenotypes in mice with distinct mRNA-seq transcriptome profiles
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE141509 | A novel systems biology approach to evaluate mouse models of late-onset Alzheimer's disease
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-29278 | A draft map of cis-regulatory sequences in the mouse genome [RNA-Seq]
Series Id: GSE29278
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-28232 | A broad phenotypic screen identifies novel dominant phenotypes in Huntington's disease CAG knock-in mice
Series Id: GSE28232
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-78005 | Cis-regulatory architecture of a brain-signaling center predates the origin of chordates
Series Id: GSE78005
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE124323 | Epithelial Vegfa specifies a distinct endothelial population in the mouse lung [scRNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-24822 | Small non-coding RNA expression in murine germ cells
Series Id: GSE24822
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-55965 | A gene expression atlas of early craniofacial development
Series Id: GSE55965
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE113069 | The subiculum is a patchwork of discrete subregions
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE110614 | Coronary arterial development is regulated by a Dll4-Jag1-EphrinB2 signaling cascade
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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