Type |
Details |
Score |
Publication |
First Author: |
Lai YJ |
Year: |
2019 |
Journal: |
Aging Cell |
Title: |
Estrogen receptor α promotes Cav1.2 ubiquitination and degradation in neuronal cells and in APP/PS1 mice. |
Volume: |
18 |
Issue: |
4 |
Pages: |
e12961 |
|
•
•
•
•
•
|
Publication |
First Author: |
Moyer SM |
Year: |
2020 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
p53 drives a transcriptional program that elicits a non-cell-autonomous response and alters cell state in vivo. |
Volume: |
117 |
Issue: |
38 |
Pages: |
23663-23673 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhu F |
Year: |
2021 |
Journal: |
Biochim Biophys Acta Mol Basis Dis |
Title: |
Tubular Numb promotes renal interstitial fibrosis via modulating HIF-1α protein stability. |
Volume: |
1867 |
Issue: |
5 |
Pages: |
166081 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xue Y |
Year: |
2023 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Proteasome inhibitor bortezomib stabilizes and activates p53 in hematopoietic stem/progenitors and double-negative T cells in vivo. |
Volume: |
120 |
Issue: |
13 |
Pages: |
e2219978120 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huang Y |
Year: |
2024 |
Journal: |
Cells |
Title: |
Alcohol Exposure Induces Nucleolar Stress and Apoptosis in Mouse Neural Stem Cells and Late-Term Fetal Brain. |
Volume: |
13 |
Issue: |
5 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lentzen G |
Year: |
2003 |
Journal: |
Chem Biol |
Title: |
Structural basis for contrasting activities of ribosome binding thiazole antibiotics. |
Volume: |
10 |
Issue: |
8 |
Pages: |
769-78 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jonker HR |
Year: |
2007 |
Journal: |
Nucleic Acids Res |
Title: |
L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy. |
Volume: |
35 |
Issue: |
2 |
Pages: |
441-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jenvert RM |
Year: |
2007 |
Journal: |
J Mol Biol |
Title: |
The flexible N-terminal domain of ribosomal protein L11 from Escherichia coli is necessary for the activation of stringent factor. |
Volume: |
365 |
Issue: |
3 |
Pages: |
764-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kasai K |
Year: |
2006 |
Journal: |
J Bacteriol |
Title: |
Physiological analysis of the stringent response elicited in an extreme thermophilic bacterium, Thermus thermophilus. |
Volume: |
188 |
Issue: |
20 |
Pages: |
7111-22 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dai MS |
Year: |
2006 |
Journal: |
J Biol Chem |
Title: |
Regulation of the MDM2-p53 pathway by ribosomal protein L11 involves a post-ubiquitination mechanism. |
Volume: |
281 |
Issue: |
34 |
Pages: |
24304-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bouakaz L |
Year: |
2006 |
Journal: |
J Biol Chem |
Title: |
The role of ribosomal protein L11 in class I release factor-mediated translation termination and translational accuracy. |
Volume: |
281 |
Issue: |
7 |
Pages: |
4548-56 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bowen WS |
Year: |
2005 |
Journal: |
J Biol Chem |
Title: |
Interaction of thiostrepton and elongation factor-G with the ribosomal protein L11-binding domain. |
Volume: |
280 |
Issue: |
4 |
Pages: |
2934-43 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bhat KP |
Year: |
2004 |
Journal: |
EMBO J |
Title: |
Essential role of ribosomal protein L11 in mediating growth inhibition-induced p53 activation. |
Volume: |
23 |
Issue: |
12 |
Pages: |
2402-12 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Ribosomal protein L11 is one of the proteins from the large ribosomal subunit. In Escherichia coli, L11 is known to bind directly to the 23S rRNA and plays a significant role during initiation, elongation, and termination of protein synthesis. It belongs to a family of ribosomal proteins which, on the basis of sequence similarities [], groups bacteria, plant chloroplast, red algal chloroplast, cyanelle and archaeabacterial L11; and mammalian, plant and yeast L12 (YL15). L11 is a protein of 140 to 165 amino-acid residues. L11 consists of a 23S rRNA binding C-terminal domain and an N-terminal domain that directly contacts protein synthesis factors. These two domains are joined by a flexible linker that allows inter-domain movement during protein synthesis. While the C-terminal domain of L11 binds RNA tightly, the N-terminal domain makes only limited contacts with RNA and is proposed to function as a switch that reversibly associates with an adjacent region of RNA [, , , ]. In E. coli, the C-terminal half of L11 has been shown []to be in an extended and loosely folded conformation and is likely to be buried within the ribosomal structure.Ribosomal protein L11, together with proteins L10 and L7/L12, and 23S rRNA, form the L7/L12 stalk on the surface of the large subunit of the ribosome. The homologous eukaryotic cytoplasmic protein is also called 60S ribosomal protein L12, which is distinct from the L12 involved in the formation of the L7/L12 stalk. The C-terminal domain (CTD) of L11 is essential for binding 23S rRNA, while the N-terminal domain (NTD) contains the binding site for the antibiotics thiostrepton and micrococcin. L11 and 23S rRNA form an essential part of the GTPase-associated region (GAR). Based on differences in the relative positions of the L11 NTD and CTD during the translational cycle, L11 is proposed to play a significant role in the binding of initiation factors, elongation factors, and release factors to the ribosome. Several factors, including the class I release factors RF1 and RF2, are known to interact directly with L11. In eukaryotes, L11 has been implicated in regulating the levels of ubiquinated p53 and MDM2 in the MDM2-p53 feedback loop, which is responsible for apoptosis in response to DNA damage. In bacteria, the "stringent response"to harsh conditions allows bacteria to survive, and ribosomes that lack L11 are deficient in stringent factor stimulation [, , , , , , , , , , , ]. |
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•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
The "FY-rich"domain N-terminal (FYRN) and "FY-rich"domain C-terminal (FYRC) sequence motifs are two poorly characterised phenylalanine/tyrosine-rich regions of around 50 and 100 amino acids, respectively, that arefound in a variety of chromatin-associated proteins [, , , ]. They areparticularly common in histone H3K4 methyltransferases most notably in afamily of proteins that includes human mixed lineage leukemia (MLL) and theDrosophila melanogaster protein trithorax. Both of these enzymes play a keyrole in the epigenetic regulation of gene expression during development, andthe gene coding for MLL is frequently rearranged in infant and secondarytherapy-related acute leukemias. They are also found in transforming growthfactor beta regulator 1 (TBRG1), a growth inhibitory protein induced in cellsundergoing arrest in response to DNA damage and transforming growth factor(TGF)-beta1. As TBRG1 has been shown to bind to both the tumor suppressorp14ARF and MDM2, a key regulator of p53, it is also known as nuclearinteractor of ARF and MDM2 (NIAM). In most proteins, the FYRN and FYRC regionsare closely juxtaposed, however, in MLL and its homologues they are fardistant. To be fully active, MLL must be proteolytically processed bytaspase1, which cleaves the protein between the FYRN and FYRC regions []. TheN-terminal and C-terminal fragments remain associated after proteolysisapparently as a result of an interaction between the FYRN and FYRC regions.How proteolytic processing regulates the activity of MLL is not known.Intriguingly, the FYRN and FYRC motifs of a second family of histone H3K4methyltransferases, represented by MLL2 and MLL4 in humans and TRR inDrosophila melanogaster, are closely juxtaposed. FYRN and FYRC motifs arefound in association with modules that create or recognise histonemodifications in proteins from a wide range of eukaryotes, and it is likelythat in these proteins they have a conserved role related to some aspect ofchromatin biology [].The FYRN and FYRC regions are not separate independently folded domains, butare components of a distinct protein module, The FYRN and FYRC motifs bothform part of a single folded module (the FYR domain), which adopts an alpha+beta fold consisting of a six-stranded antiparallel β-sheet followed byfour consecutive α-helices. The FYRN region correspondsto β-strands 1-4 and their connecting loops, whereas the FYRC motif maps toβ-strand 5, β-strand 6 and helices alpha1 to alpha4. Most of theconserved tyrosine and phenylalanine residues, after which these motifs arenamed are involved in interactions that stabilise the fold. Proteins such asMLL, in which the FYRN and FYRC regions are separated by hundreds of aminoacids, are expected to contain FYR domains with a large insertion between twoof the strands of the β-sheet (strands 4 and 5) []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
The "FY-rich"domain N-terminal (FYRN) and "FY-rich"domain C-terminal (FYRC) sequence motifs are two poorly characterised phenylalanine/tyrosine-rich regions of around 50 and 100 amino acids, respectively, that arefound in a variety of chromatin-associated proteins [, , , ]. They areparticularly common in histone H3K4 methyltransferases most notably in afamily of proteins that includes human mixed lineage leukemia (MLL) and theDrosophila melanogaster protein trithorax. Both of these enzymes play a keyrole in the epigenetic regulation of gene expression during development, andthe gene coding for MLL is frequently rearranged in infant and secondarytherapy-related acute leukemias. They are also found in transforming growthfactor beta regulator 1 (TBRG1), a growth inhibitory protein induced in cellsundergoing arrest in response to DNA damage and transforming growth factor(TGF)-beta1. As TBRG1 has been shown to bind to both the tumor suppressorp14ARF and MDM2, a key regulator of p53, it is also known as nuclearinteractor of ARF and MDM2 (NIAM). In most proteins, the FYRN and FYRC regionsare closely juxtaposed, however, in MLL and its homologues they are fardistant. To be fully active, MLL must be proteolytically processed bytaspase1, which cleaves the protein between the FYRN and FYRC regions []. TheN-terminal and C-terminal fragments remain associated after proteolysisapparently as a result of an interaction between the FYRN and FYRC regions.How proteolytic processing regulates the activity of MLL is not known.Intriguingly, the FYRN and FYRC motifs of a second family of histone H3K4methyltransferases, represented by MLL2 and MLL4 in humans and TRR inDrosophila melanogaster, are closely juxtaposed. FYRN and FYRC motifs arefound in association with modules that create or recognise histonemodifications in proteins from a wide range of eukaryotes, and it is likelythat in these proteins they have a conserved role related to some aspect ofchromatin biology [].The FYRN and FYRC regions are not separate independently folded domains, butare components of a distinct protein module, The FYRN and FYRC motifs bothform part of a single folded module (the FYR domain), which adopts an alpha+beta fold consisting of a six-stranded antiparallel β-sheet followed byfour consecutive α-helices. The FYRN region correspondsto β-strands 1-4 and their connecting loops, whereas the FYRC motif maps toβ-strand 5, β-strand 6 and helices alpha1 to alpha4. Most of theconserved tyrosine and phenylalanine residues, after which these motifs arenamed are involved in interactions that stabilise the fold. Proteins such asMLL, in which the FYRN and FYRC regions are separated by hundreds of aminoacids, are expected to contain FYR domains with a large insertion between twoof the strands of the β-sheet (strands 4 and 5) []. |
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•
•
•
•
|
Publication |
First Author: |
Zhong Z |
Year: |
2010 |
Journal: |
J Neurosci |
Title: |
Protein S protects neurons from excitotoxic injury by activating the TAM receptor Tyro3-phosphatidylinositol 3-kinase-Akt pathway through its sex hormone-binding globulin-like region. |
Volume: |
30 |
Issue: |
46 |
Pages: |
15521-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hayano S |
Year: |
2015 |
Journal: |
Development |
Title: |
Augmented BMP signaling in the neural crest inhibits nasal cartilage morphogenesis by inducing p53-mediated apoptosis. |
Volume: |
142 |
Issue: |
7 |
Pages: |
1357-67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chapeau EA |
Year: |
2017 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Resistance mechanisms to TP53-MDM2 inhibition identified by in vivo piggyBac transposon mutagenesis screen in an Arf-/- mouse model. |
Volume: |
114 |
Issue: |
12 |
Pages: |
3151-3156 |
|
•
•
•
•
•
|
Publication |
First Author: |
Uo T |
Year: |
2007 |
Journal: |
J Neurosci |
Title: |
Apoptotic actions of p53 require transcriptional activation of PUMA and do not involve a direct mitochondrial/cytoplasmic site of action in postnatal cortical neurons. |
Volume: |
27 |
Issue: |
45 |
Pages: |
12198-210 |
|
•
•
•
•
•
|
Publication |
First Author: |
Comiskey DF Jr |
Year: |
2018 |
Journal: |
Oncogene |
Title: |
A novel mouse model of rhabdomyosarcoma underscores the dichotomy of MDM2-ALT1 function in vivo. |
Volume: |
37 |
Issue: |
1 |
Pages: |
95-106 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yan W |
Year: |
2016 |
Journal: |
Genes Dev |
Title: |
Mice deficient in poly(C)-binding protein 4 are susceptible to spontaneous tumors through increased expression of ZFP871 that targets p53 for degradation. |
Volume: |
30 |
Issue: |
5 |
Pages: |
522-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Iida K |
Year: |
2007 |
Journal: |
Carcinogenesis |
Title: |
Nrf2 and p53 cooperatively protect against BBN-induced urinary bladder carcinogenesis. |
Volume: |
28 |
Issue: |
11 |
Pages: |
2398-403 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nakamura K |
Year: |
2017 |
Journal: |
J Hepatol |
Title: |
Macrophage heme oxygenase-1-SIRT1-p53 axis regulates sterile inflammation in liver ischemia-reperfusion injury. |
Volume: |
67 |
Issue: |
6 |
Pages: |
1232-1242 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sugihara T |
Year: |
2008 |
Journal: |
J Radiat Res |
Title: |
Inverse dose-rate-effects on the expressions of extra-cellular matrix-related genes in low-dose-rate gamma-ray irradiated murine cells. |
Volume: |
49 |
Issue: |
3 |
Pages: |
231-40 |
|
•
•
•
•
•
|
Publication |
First Author: |
Saldivar JC |
Year: |
2012 |
Journal: |
PLoS Genet |
Title: |
Initiation of genome instability and preneoplastic processes through loss of Fhit expression. |
Volume: |
8 |
Issue: |
11 |
Pages: |
e1003077 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhuang S |
Year: |
2000 |
Journal: |
Mutat Res |
Title: |
Genetic analysis of Raf1, Mdm2, c-Myc, Cdc25a and Cdc25b proto-oncogenes in 2',3'-dideoxycytidine- and 1,3-butadiene-induced lymphomas in B6C3F1 mice. |
Volume: |
452 |
Issue: |
1 |
Pages: |
19-26 |
|
•
•
•
•
•
|
Publication |
First Author: |
Phelps M |
Year: |
2003 |
Journal: |
Cancer Res |
Title: |
p53-independent activation of the hdm2-P2 promoter through multiple transcription factor response elements results in elevated hdm2 expression in estrogen receptor alpha-positive breast cancer cells. |
Volume: |
63 |
Issue: |
10 |
Pages: |
2616-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Levav-Cohen Y |
Year: |
2005 |
Journal: |
Biochem Biophys Res Commun |
Title: |
C-Abl as a modulator of p53. |
Volume: |
331 |
Issue: |
3 |
Pages: |
737-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Martinelli VC |
Year: |
2014 |
Journal: |
PLoS One |
Title: |
ZASP interacts with the mechanosensing protein Ankrd2 and p53 in the signalling network of striated muscle. |
Volume: |
9 |
Issue: |
3 |
Pages: |
e92259 |
|
•
•
•
•
•
|
Publication |
First Author: |
Valentino T |
Year: |
2013 |
Journal: |
Cell Death Dis |
Title: |
PATZ1 interacts with p53 and regulates expression of p53-target genes enhancing apoptosis or cell survival based on the cellular context. |
Volume: |
4 |
|
Pages: |
e963 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kooi IE |
Year: |
2017 |
Journal: |
Genes Chromosomes Cancer |
Title: |
Genomic landscape of retinoblastoma in Rb-/- p130-/- mice resembles human retinoblastoma. |
Volume: |
56 |
Issue: |
3 |
Pages: |
231-242 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
614
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
614
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
427
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
638
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
427
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
García-Alai MM |
Year: |
2010 |
Journal: |
Protein Sci |
Title: |
The structure of the FYR domain of transforming growth factor beta regulator 1. |
Volume: |
19 |
Issue: |
7 |
Pages: |
1432-8 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
344
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
294
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
171
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
272
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
294
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
344
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
344
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
344
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
294
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
294
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
344
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
294
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
294
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Kutle I |
Year: |
2020 |
Journal: |
J Virol |
Title: |
Murine Cytomegalovirus M25 Proteins Sequester the Tumor Suppressor Protein p53 in Nuclear Accumulations. |
Volume: |
94 |
Issue: |
20 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Tiwari A |
Year: |
2020 |
Journal: |
Gastroenterology |
Title: |
Loss of HIF1A From Pancreatic Cancer Cells Increases Expression of PPP1R1B and Degradation of p53 to Promote Invasion and Metastasis. |
Volume: |
159 |
Issue: |
5 |
Pages: |
1882-1897.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Prasad R |
Year: |
1997 |
Journal: |
Oncogene |
Title: |
Structure and expression pattern of human ALR, a novel gene with strong homology to ALL-1 involved in acute leukemia and to Drosophila trithorax. |
Volume: |
15 |
Issue: |
5 |
Pages: |
549-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hsieh JJ |
Year: |
2003 |
Journal: |
Mol Cell Biol |
Title: |
Proteolytic cleavage of MLL generates a complex of N- and C-terminal fragments that confers protein stability and subnuclear localization. |
Volume: |
23 |
Issue: |
1 |
Pages: |
186-94 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
342
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Balciunas D |
Year: |
2000 |
Journal: |
Trends Biochem Sci |
Title: |
Evidence of domain swapping within the jumonji family of transcription factors. |
Volume: |
25 |
Issue: |
6 |
Pages: |
274-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Doerks T |
Year: |
2002 |
Journal: |
Genome Res |
Title: |
Systematic identification of novel protein domain families associated with nuclear functions. |
Volume: |
12 |
Issue: |
1 |
Pages: |
47-56 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
865
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1524
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
563
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1748
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1520
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
442
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Kavran JM |
Year: |
2007 |
Journal: |
J Mol Biol |
Title: |
Structure of the base of the L7/L12 stalk of the Haloarcula marismortui large ribosomal subunit: analysis of L11 movements. |
Volume: |
371 |
Issue: |
4 |
Pages: |
1047-59 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
218
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1744
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Galderisi U |
Year: |
2003 |
Journal: |
Oncogene |
Title: |
Cell cycle regulation and neural differentiation. |
Volume: |
22 |
Issue: |
33 |
Pages: |
5208-19 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
150
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
114
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Klein DJ |
Year: |
2004 |
Journal: |
J Mol Biol |
Title: |
The roles of ribosomal proteins in the structure assembly, and evolution of the large ribosomal subunit. |
Volume: |
340 |
Issue: |
1 |
Pages: |
141-77 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
3966
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
5588
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
4903
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2713
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2721
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
5588
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2013
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
4904
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2014
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
165
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
192
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
165
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
158
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
762
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
164
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
165
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Choli T |
Year: |
1989 |
Journal: |
Biochem Int |
Title: |
Structural properties of ribosomal protein L11 from Escherichia coli. |
Volume: |
19 |
Issue: |
6 |
Pages: |
1323-38 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pucciarelli MG |
Year: |
1990 |
Journal: |
Nucleic Acids Res |
Title: |
The 26S rRNA binding ribosomal protein equivalent to bacterial protein L11 is encoded by unspliced duplicated genes in Saccharomyces cerevisiae. |
Volume: |
18 |
Issue: |
15 |
Pages: |
4409-16 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wimberly BT |
Year: |
1999 |
Journal: |
Cell |
Title: |
A detailed view of a ribosomal active site: the structure of the L11-RNA complex. |
Volume: |
97 |
Issue: |
4 |
Pages: |
491-502 |
|
•
•
•
•
•
|
Publication |
First Author: |
Demirci H |
Year: |
2007 |
Journal: |
EMBO J |
Title: |
Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA. |
Volume: |
26 |
Issue: |
2 |
Pages: |
567-77 |
|
•
•
•
•
•
|
Publication |
First Author: |
Harms JM |
Year: |
2008 |
Journal: |
Mol Cell |
Title: |
Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin. |
Volume: |
30 |
Issue: |
1 |
Pages: |
26-38 |
|
•
•
•
•
•
|
Publication |
First Author: |
Demirci H |
Year: |
2008 |
Journal: |
Structure |
Title: |
Multiple-site trimethylation of ribosomal protein L11 by the PrmA methyltransferase. |
Volume: |
16 |
Issue: |
7 |
Pages: |
1059-66 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. |
Volume: |
10 |
Issue: |
10 |
Pages: |
1617-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
1999 |
Journal: |
Methods Enzymol |
Title: |
High-efficiency full-length cDNA cloning. |
Volume: |
303 |
|
Pages: |
19-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shibata K |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. |
Volume: |
10 |
Issue: |
11 |
Pages: |
1757-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Katayama S |
Year: |
2005 |
Journal: |
Science |
Title: |
Antisense transcription in the mammalian transcriptome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1564-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
|
•
•
•
•
•
|
Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
|
•
•
•
•
•
|