|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 101 to 200 out of 214 for Stab1

<< First    < Previous  |  Next >    Last >>
0.025s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
GXD Expression
GXD Expression
   
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1669616
Stage: TS16
Assay Id: MGI:5619850
Age: embryonic day 10.0
Image: 3C
Specimen Label: 3C
Detected: false
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3274324
Pattern: Regionally restricted
Stage: TS24
Assay Id: MGI:3585399
Age: embryonic day 16.0
Note: Expression was detected in pericytes.
Specimen Label: Embryo
Detected: true
Specimen Num: 10
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3274315
Pattern: Not Specified
Stage: TS15
Assay Id: MGI:5619850
Age: embryonic day 9.5
Image: 2G
Note: Expressed in endothelial cells.
Specimen Label: 2G
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2854023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915726
Pattern: Not Specified
Stage: TS26
Assay Id: MGI:3585399
Age: embryonic day 18.0
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: E18
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585399
Age: postnatal day 0-1
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: P0/1
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585399
Age: postnatal day 2-3
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: P2/3
Detected: true
Specimen Num: 4
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585399
Age: postnatal day 4-5
Note: Expression was detected in the outer neuroblastic layer but was higher in the vitreal outer neuroblastic layer.
Specimen Label: P4/5
Detected: true
Specimen Num: 5
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585399
Age: postnatal day 6-7
Specimen Label: P6/7
Detected: true
Specimen Num: 6
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585399
Age: postnatal day 8-10
Specimen Label: P8/10
Detected: true
Specimen Num: 7
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Male
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585399
Age: postnatal adult
Specimen Label: Adult
Detected: true
Specimen Num: 8
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3517620
Pattern: Widespread
Stage: TS20
Assay Id: MGI:5619850
Age: embryonic day 12.0
Note: Expressed in isolated endothelial cells.
Specimen Label: not shown
Detected: true
Specimen Num: 13
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3517628
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:5619850
Age: postnatal adult
Image: 5C
Note: Expressed throughout the endothelial cells that line the great vessels.
Specimen Label: 5C
Detected: true
Specimen Num: 10
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2762123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2762123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5129
Specimen Label: GUDMAP:5129
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1658922
Pattern: Punctate
Stage: TS22
Assay Id: MGI:5619850
Age: embryonic day 14.0
Image: 4L
Note: Epicardiaum.
Specimen Label: 4L
Detected: true
Specimen Num: 8
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1658922
Pattern: Punctate
Stage: TS22
Assay Id: MGI:5619850
Age: embryonic day 14.0
Image: 4M
Note: Epicardiaum.
Specimen Label: 4M
Detected: true
Specimen Num: 9
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1859224
Pattern: Regionally restricted
Stage: TS24
Assay Id: MGI:3585399
Age: embryonic day 16.0
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: E16
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3286028
Pattern: Single cells
Stage: TS28
Assay Id: MGI:5619850
Age: postnatal adult
Image: 5C inset
Note: Expressed in a isolated cells.
Specimen Label: 5C inset
Detected: true
Specimen Num: 11
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1797223
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5129
Specimen Label: GUDMAP:5129
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3266028
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:3585399
Age: postnatal day 6
Note: Expression was detected in a subset of cells near or in meninges.
Specimen Label: CNS
Detected: true
Specimen Num: 9
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1832123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1832123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5129
Specimen Label: GUDMAP:5129
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2851823
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2851823
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5129
Specimen Label: GUDMAP:5129
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1732922
Pattern: Punctate
Stage: TS22
Assay Id: MGI:5619850
Age: embryonic day 14.0
Image: 4M
Note: Expressed in endothelial cells lining the aortic and pulmonary outlets.
Specimen Label: 4M
Detected: true
Specimen Num: 9
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2760523
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2760523
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5129
Specimen Label: GUDMAP:5129
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1605715
Pattern: Not Specified
Stage: TS15
Assay Id: MGI:5619850
Age: embryonic day 9.5
Image: 2C
Specimen Label: 2C
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2852723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2852723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5129
Specimen Label: GUDMAP:5129
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2874723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1733022
Pattern: Punctate
Stage: TS22
Assay Id: MGI:5619850
Age: embryonic day 14.0
Image: 4M
Note: Expressed in endothelial cells lining the aortic and pulmonary outlets.
Specimen Label: 4M
Detected: true
Specimen Num: 9
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1757722
Stage: TS22
Assay Id: MGI:5619850
Age: embryonic day 14.0
Image: 4C
Specimen Label: 4C
Detected: false
Specimen Num: 6
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2850023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2850023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5129
Specimen Label: GUDMAP:5129
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:3585094
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1796223
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5540344
Age: embryonic day 15.5
Image: GUDMAP:5128
Specimen Label: GUDMAP:5128
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1761820
Stage: TS20
Assay Id: MGI:5619850
Age: embryonic day 12.0
Image: 3K
Specimen Label: 3K
Detected: false
Specimen Num: 5
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:5619522
Assay Type: RNA in situ
Annotation Date: 2015-03-24
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1761822
Pattern: Punctate
Stage: TS22
Assay Id: MGI:5619850
Age: embryonic day 14.0
Image: 4F
Note: Expressed in isolated mesechymal cells.
Specimen Label: 4F
Detected: true
Specimen Num: 7
•
•
•
•
•
Publication
11829752 | J:75013
First Author: Politz O
Year: 2002
Journal: Biochem J
Title: Stabilin-1 and -2 constitute a novel family of fasciclin-like hyaluronan receptor homologues.
Volume: 362
Issue: Pt 1
Pages: 155-64
•
•
•
•
•
Publication
37091975 | J:345814
 
First Author: Gábris F
Year: 2023
Journal: Front Cell Dev Biol
Title: Absence of Nkx2-3 induces ectopic lymphatic endothelial differentiation associated with impaired extramedullary stress hematopoiesis in the spleen.
Volume: 11
Pages: 1170389
•
•
•
•
•
Publication
21293057 | J:171818
First Author: Schledzewski K
Year: 2011
Journal: J Clin Invest
Title: Deficiency of liver sinusoidal scavenger receptors stabilin-1 and -2 in mice causes glomerulofibrotic nephropathy via impaired hepatic clearance of noxious blood factors.
Volume: 121
Issue: 2
Pages: 703-14
•
•
•
•
•
Publication
33130055 | J:302652
 
First Author: Olsavszky V
Year: 2021
Journal: Gene
Title: Exploring the transcriptomic network of multi-ligand scavenger receptor Stabilin-1- and Stabilin-2-deficient liver sinusoidal endothelial cells.
Volume: 768
Pages: 145284
•
•
•
•
•
Publication
27474165 | J:235434
First Author: Rantakari P
Year: 2016
Journal: Proc Natl Acad Sci U S A
Title: Stabilin-1 expression defines a subset of macrophages that mediate tissue homeostasis and prevent fibrosis in chronic liver injury.
Volume: 113
Issue: 33
Pages: 9298-303
•
•
•
•
•
Publication
25320356 | J:271390
First Author: Karikoski M
Year: 2014
Journal: Clin Cancer Res
Title: Clever-1/stabilin-1 controls cancer growth and metastasis.
Volume: 20
Issue: 24
Pages: 6452-64
•
•
•
•
•
Publication
21427291 | J:173264
First Author: Lee SJ
Year: 2011
Journal: Blood
Title: Mechanism for phosphatidylserine-dependent erythrophagocytosis in mouse liver.
Volume: 117
Issue: 19
Pages: 5215-23
•
•
•
•
•
Publication
29898394 | J:271094
First Author: Doi Y
Year: 2018
Journal: Cell Rep
Title: Variable SATB1 Levels Regulate Hematopoietic Stem Cell Heterogeneity with Distinct Lineage Fate.
Volume: 23
Issue: 11
Pages: 3223-3235
•
•
•
•
•
Publication
15907457 | J:98689
First Author: Lindsley A
Year: 2005
Journal: Gene Expr Patterns
Title: Comparison of the four mouse fasciclin-containing genes expression patterns during valvuloseptal morphogenesis.
Volume: 5
Issue: 5
Pages: 593-600
•
•
•
•
•
Publication
18296617 | J:147647
First Author: Snider P
Year: 2008
Journal: Circ Res
Title: Periostin is required for maturation and extracellular matrix stabilization of noncardiomyocyte lineages of the heart.
Volume: 102
Issue: 7
Pages: 752-60
•
•
•
•
•
Publication
15733084 | J:99491
First Author: Britanova O
Year: 2005
Journal: Eur J Neurosci
Title: Novel transcription factor Satb2 interacts with matrix attachment region DNA elements in a tissue-specific manner and demonstrates cell-type-dependent expression in the developing mouse CNS.
Volume: 21
Issue: 3
Pages: 658-68
•
•
•
•
•
Publication
33927296 | J:306186
First Author: Pisko J
Year: 2021
Journal: Sci Rep
Title: Apoptotic cells in mouse blastocysts are eliminated by neighbouring blastomeres.
Volume: 11
Issue: 1
Pages: 9228
•
•
•
•
•
Publication
31550482 | J:278988
     
First Author: Tian C
Year: 2019
Journal: Dev Biol
Title: TBX1 is required for normal stria vascularis and semicircular canal development.
•
•
•
•
•
Publication
31065682 | J:302395
First Author: Shah K
Year: 2020
Journal: J Mol Cell Biol
Title: A chromatin modulator sustains self-renewal and enables differentiation of postnatal neural stem and progenitor cells.
Volume: 12
Issue: 1
Pages: 4-16
•
•
•
•
•
Publication
30333037 | J:267504
First Author: Kiyama T
Year: 2018
Journal: Mol Neurodegener
Title: Essential roles of mitochondrial biogenesis regulator Nrf1 in retinal development and homeostasis.
Volume: 13
Issue: 1
Pages: 56
•
•
•
•
•
Publication
21308776 | J:233118
First Author: Abdallah BM
Year: 2011
Journal: J Bone Miner Res
Title: DLK1 is a novel regulator of bone mass that mediates estrogen deficiency-induced bone loss in mice.
Volume: 26
Issue: 7
Pages: 1457-71
•
•
•
•
•
Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
•
•
•
•
•
Publication
14621295 | J:86686
First Author: Okazaki N
Year: 2003
Journal: DNA Res
Title: Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Volume: 10
Issue: 4
Pages: 167-80
•
•
•
•
•
Publication
- | J:104881
     
First Author: The RIKEN BioResource Center
Year: 2006
Journal: Unpublished
Title: Information obtained from The RIKEN BioResource Center
•
•
•
•
•
Publication
15226823 | J:93300
First Author: Blackshaw S
Year: 2004
Journal: PLoS Biol
Title: Genomic analysis of mouse retinal development.
Volume: 2
Issue: 9
Pages: E247
•
•
•
•
•
Publication
- | J:346132
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2016
Title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
•
•
•
•
•
Publication
- | J:148605
     
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
•
•
•
•
•
Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
•
•
•
•
•
Publication
- | J:72247
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
•
•
•
•
•
Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
•
•
•
•
•
Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
•
•
•
•
•
Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Protein
Q6PDN4
Organism: Mus musculus/domesticus
Length: 692  
Fragment?: false
•
•
•
•
•
Allele
Stab1<em1Smoc> | MGI:7292602
Name: stabilin 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
•
•
•
•
•
HT Experiment
E-GEOD-78752 | Transcriptome of liver tissue in 5 week old Stabilin-1 knock-out mice
Series Id: GSE78752
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
HT Experiment
GSE114969 | Transcriptome of liver tissue in 2 week old and E17.5 Stabilin-1 knock-out mice
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
•
•
•
•
•
Publication
11463840 | -
First Author: Galande S
Year: 2001
Journal: Mol Cell Biol
Title: SATB1 cleavage by caspase 6 disrupts PDZ domain-mediated dimerization, causing detachment from chromatin early in T-cell apoptosis.
Volume: 21
Issue: 16
Pages: 5591-604
•
•
•
•
•
Publication
9922454 | -
First Author: Slee EA
Year: 1999
Journal: J Cell Biol
Title: Ordering the cytochrome c-initiated caspase cascade: hierarchical activation of caspases-2, -3, -6, -7, -8, and -10 in a caspase-9-dependent manner.
Volume: 144
Issue: 2
Pages: 281-92
•
•
•
•
•
Publication
19694615 | -
First Author: Baumgartner R
Year: 2009
Journal: Biochem J
Title: The crystal structure of caspase-6, a selective effector of axonal degeneration.
Volume: 423
Issue: 3
Pages: 429-39
•
•
•
•
•
Publication
9092497 | -
First Author: Talanian RV
Year: 1997
Journal: J Biol Chem
Title: Substrate specificities of caspase family proteases.
Volume: 272
Issue: 15
Pages: 9677-82
•
•
•
•
•
Publication
20890311 | -
First Author: Wang XJ
Year: 2010
Journal: EMBO Rep
Title: Crystal structures of human caspase 6 reveal a new mechanism for intramolecular cleavage self-activation.
Volume: 11
Issue: 11
Pages: 841-7
•
•
•
•
•
Publication
8663580 | -
First Author: Orth K
Year: 1996
Journal: J Biol Chem
Title: The CED-3/ICE-like protease Mch2 is activated during apoptosis and cleaves the death substrate lamin A.
Volume: 271
Issue: 28
Pages: 16443-6
•
•
•
•
•
Publication
12232792 | -
First Author: Cowling V
Year: 2002
Journal: Cell Death Differ
Title: Caspase-6 is the direct activator of caspase-8 in the cytochrome c-induced apoptosis pathway: absolute requirement for removal of caspase-6 prodomain.
Volume: 9
Issue: 10
Pages: 1046-56
•
•
•
•
•
Publication
19325570 | J:164181
First Author: Inoue S
Year: 2009
Journal: Cell Death Differ
Title: Ordering of caspases in cells undergoing apoptosis by the intrinsic pathway.
Volume: 16
Issue: 7
Pages: 1053-61
•
•
•
•
•
Publication
15933068 | -
First Author: Bideshi DK
Year: 2005
Journal: Genes Dev
Title: A viral caspase contributes to modified apoptosis for virus transmission.
Volume: 19
Issue: 12
Pages: 1416-21
•
•
•
•
•
Protein Domain
IPR037554 | Caspase_6
Type: Family
Description: Caspase-6 (EC 3.4.22.59; MEROPS identifier C14.005) is a cysteine endopeptidase from family C14. It cleaves aspartyl bonds, and has a preference for Val in P4, Glu or Gln in P3, His or Val in P2 and Gly in P1' [, ]similar to the initiator caspases 8 and 9 []. Caspase-6 processes its own precursor to generate a two-chain form [, ]and lamin A []and STAB1 [], which are not cleaved by caspases 3 or 7. Unusually, caspase-6 activity is unaffected by XIAP []. Caspase-6 is an initiator caspase activated by caspases 3 and 7 []and activating caspase-8 [, ]. It also translocates to the nucleus where processing of lamin A occurs.This entry also includes SfAV caspase from Spodoptera frugiperda ascovirus (MEROPS identifier C14.037), which is an executioner caspase that can induce apoptosis in host insect cells [].
•
•
•
•
•
Publication
8114718 | J:25667
First Author: Nakagomi K
Year: 1994
Journal: Mol Cell Biol
Title: A novel DNA-binding motif in the nuclear matrix attachment DNA-binding protein SATB1.
Volume: 14
Issue: 3
Pages: 1852-60
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom