Type |
Details |
Score |
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
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•
•
•
•
•
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Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
Publication |
First Author: |
Cotta-Ramusino C |
Year: |
2011 |
Journal: |
Science |
Title: |
A DNA damage response screen identifies RHINO, a 9-1-1 and TopBP1 interacting protein required for ATR signaling. |
Volume: |
332 |
Issue: |
6035 |
Pages: |
1313-7 |
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•
•
•
•
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Interaction Experiment |
Description: |
Genome Protection by the 9-1-1 Complex Subunit HUS1 Requires Clamp Formation, DNA Contacts, and ATR Signaling-independent Effector Functions. |
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•
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•
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Allele |
Name: |
HUS1 checkpoint clamp component; targeted mutation 1e, Helmholtz Zentrum Muenchen GmbH |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
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•
•
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Allele |
Name: |
HUS1 checkpoint clamp component; gene trap XS0122, Wellcome Trust Sanger Institute |
Allele Type: |
Gene trapped |
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•
•
•
•
•
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Allele |
Name: |
HUS1 checkpoint clamp component; targeted mutation 1a, Helmholtz Zentrum Muenchen GmbH |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, Null/knockout, Reporter |
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•
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•
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Allele |
Name: |
HUS1 checkpoint clamp component; targeted mutation 1, Mouse Biology Program, UC Davis |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
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•
•
•
•
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Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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•
•
•
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Genotype |
Symbol: |
Hus1/Hus1 |
Background: |
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hus1/Hus1 |
Background: |
involves: 129S4/SvJaeSor * 129S6/SvEvTac |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hus1/Hus1 |
Background: |
involves: 129S6/SvEvTac |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Lim PX |
Year: |
2015 |
Journal: |
J Biol Chem |
Title: |
Genome Protection by the 9-1-1 Complex Subunit HUS1 Requires Clamp Formation, DNA Contacts, and ATR Signaling-independent Effector Functions. |
Volume: |
290 |
Issue: |
24 |
Pages: |
14826-40 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hus1/Hus1<+> |
Background: |
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Cdkn1a/Cdkn1a Hus1/Hus1 |
Background: |
involves: 129S6/SvEvTac |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hus1/Hus1 |
Background: |
involves: 129S6/SvEvTac * C57BL/6 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hus1/Hus1 Tg(Hsp70-1-cre)1Arge/? |
Background: |
involves: 129S4/SvJaeSor * 129S6/SvEvTac * C57BL/6J * CBA |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
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Genotype |
Symbol: |
Hus1/Hus1 Trp53/Trp53<+> |
Background: |
involves: 129S2/SvPas * 129S6/SvEvTac * C57BL/6 |
Zygosity: |
cx |
Has Mutant Allele: |
true |
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•
•
•
•
•
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Publication |
First Author: |
Dufault VM |
Year: |
2003 |
Journal: |
Genomics |
Title: |
Identification and characterization of RAD9B, a paralog of the RAD9 checkpoint gene. |
Volume: |
82 |
Issue: |
6 |
Pages: |
644-51 |
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•
•
•
•
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Publication |
First Author: |
Ishii H |
Year: |
2006 |
Journal: |
Cancer Res |
Title: |
Fhit modulates the DNA damage checkpoint response. |
Volume: |
66 |
Issue: |
23 |
Pages: |
11287-92 |
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•
•
•
•
•
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Publication |
First Author: |
Pereira C |
Year: |
2022 |
Journal: |
Elife |
Title: |
Multiple 9-1-1 complexes promote homolog synapsis, DSB repair, and ATR signaling during mammalian meiosis. |
Volume: |
11 |
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|
|
•
•
•
•
•
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Publication |
First Author: |
Kostrub CF |
Year: |
1997 |
Journal: |
Mol Gen Genet |
Title: |
Molecular analysis of hus1+, a fission yeast gene required for S-M and DNA damage checkpoints. |
Volume: |
254 |
Issue: |
4 |
Pages: |
389-99 |
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•
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Protein Domain |
Type: |
Family |
Description: |
This entry consists of the human Hus1 protein and budding yeast Mec3. They are components of the checkpoint clamp complex involved in the surveillance mechanism that allows the DNA repair pathways to act to restore the integrity of the DNA prior to DNA synthesis or separation of the replicated chromosomes [, ]. Hus1, Rad1, and Rad9 (which share homology with Mec1, Rad17, Ddc1 in budding yeast) are three evolutionarily conserved proteins required for checkpoint control. These proteins are known to form a stable complex. Structurally, the Ddc1-Mec3-Rad17 complex is similar to the PCNA complex, which forms trimeric ring-shaped clamps. Ddc1-Mec3-Rad17 plays a role in checkpoint activation that permits DNA-repair pathways to prevent cell cycle progression in response to DNA damage and replication stress [, ]. |
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Protein Domain |
Type: |
Family |
Description: |
This entry includes DNA damage checkpoint proteins Rad9. Rad9 is required for transient cell-cycle arrests and transcriptional induction of DNA repair in response to DNA damage []. It is worth noting that this entry including the mamalian Rad9, which is homologous to the fission yeast Rad9 and the budding yeast Ddc1. Members of this family do not share the sequence homology with the budding yeast Rad9.Rad9 forms a complex with Hus1 and Rad1, called 9-1-1 complex. In human, 9-1-1 binds to TopBP1 and activates the ATR-Chk1 checkpoint pathway []. Rad9 also shows 3'-5' exonuclease activity []. Besides its function in the 9-1-1 complex, Rad9 can act as a transcriptional factor, participate in immunoglobulin classswitch recombination []. Aberrant Rad9 expression has been associated with prostate, breast, lung, skin, thyroid, and gastric cancers []. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
389
|
Fragment?: |
false |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
403
|
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
403
|
Fragment?: |
false |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
366
|
Fragment?: |
false |
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•
•
•
•
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Publication |
First Author: |
Broustas CG |
Year: |
2012 |
Journal: |
J Cell Biochem |
Title: |
Contributions of Rad9 to tumorigenesis. |
Volume: |
113 |
Issue: |
3 |
Pages: |
742-51 |
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•
•
•
•
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Publication |
First Author: |
Ueda S |
Year: |
2012 |
Journal: |
Genes Cells |
Title: |
Two serine phosphorylation sites in the C-terminus of Rad9 are critical for 9-1-1 binding to TopBP1 and activation of the DNA damage checkpoint response in HeLa cells. |
Volume: |
17 |
Issue: |
10 |
Pages: |
807-16 |
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•
•
•
•
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Publication |
First Author: |
Bessho T |
Year: |
2000 |
Journal: |
J Biol Chem |
Title: |
Human DNA damage checkpoint protein hRAD9 is a 3' to 5' exonuclease. |
Volume: |
275 |
Issue: |
11 |
Pages: |
7451-4 |
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•
•
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•
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Publication |
First Author: |
An L |
Year: |
2010 |
Journal: |
J Biol Chem |
Title: |
Rad9 is required for B cell proliferation and immunoglobulin class switch recombination. |
Volume: |
285 |
Issue: |
46 |
Pages: |
35267-73 |
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•
•
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Publication |
First Author: |
Wit N |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Lysine residue 185 of Rad1 is a topological but not a functional counterpart of lysine residue 164 of PCNA. |
Volume: |
6 |
Issue: |
1 |
Pages: |
e16669 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
92
|
Fragment?: |
true |
|
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
144
|
Fragment?: |
true |
|
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
73
|
Fragment?: |
false |
|
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
64
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
80
|
Fragment?: |
true |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
122
|
Fragment?: |
true |
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•
•
•
•
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Publication |
First Author: |
Vialard JE |
Year: |
1998 |
Journal: |
EMBO J |
Title: |
The budding yeast Rad9 checkpoint protein is subjected to Mec1/Tel1-dependent hyperphosphorylation and interacts with Rad53 after DNA damage. |
Volume: |
17 |
Issue: |
19 |
Pages: |
5679-88 |
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•
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Protein Domain |
Type: |
Family |
Description: |
This entry represents the DNA damage checkpoint protein Rad9 and its homologue in budding yeast, Ddc1. Rad9 forms a complex with Hus1 and Rad1 (called 9-1-1 complex). Ddc1 forms a similar complex with Mec1 and Rad17. Structurally, the 9-1-1 / Ddc1-Mec3-Rad17 complex is similar to the PCNA complex, which forms trimeric ring-shaped clamps. The 9-1-1 / Ddc1-Mec3-Rad17 complex plays a role in checkpoint activation that permits DNA-repair pathways to prevent cell cycle progression in response to DNA damage and replication stress [, ].In humans, 9-1-1 binds to TopBP1 and activates the ATR-Chk1 checkpoint pathway []. Besides its function in the 9-1-1 complex, Rad9 can also act as a transcriptional factor and participate in immunoglobulin class switch recombination []. It also shows 3'-5' exonuclease activity []. Aberrant Rad9 expression has been associated with prostate, breast, lung, skin, thyroid, and gastric cancers [].In budding yeast, Ddc1 can activate Mec1 (the principal checkpoint protein kinase, human ATR homologue) in G1 phase. In G2 phase, Ddc1 can either activate Mec1 directly or recruit Dpb11 (the orthologue of human TopBP1) and subsequently activate Mec1 []. Ddc1 does not have DNA exonuclease function [].It is worth noting that the Rad9 proteins referred to in this entry are the mammalian and fission yeast homologues of budding yeast Ddc1. Members of this family do not share the sequence homology another DNA damage-dependent checkpoint protein from budding yeast, confusingly also called Rad9. |
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Publication |
First Author: |
Longhese MP |
Year: |
1997 |
Journal: |
EMBO J |
Title: |
The novel DNA damage checkpoint protein ddc1p is phosphorylated periodically during the cell cycle and in response to DNA damage in budding yeast. |
Volume: |
16 |
Issue: |
17 |
Pages: |
5216-26 |
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•
•
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•
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Publication |
First Author: |
Eichinger CS |
Year: |
2011 |
Journal: |
Trends Biochem Sci |
Title: |
9-1-1: PCNA's specialized cousin. |
Volume: |
36 |
Issue: |
11 |
Pages: |
563-8 |
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•
•
•
•
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Publication |
First Author: |
Kondo T |
Year: |
1999 |
Journal: |
Mol Cell Biol |
Title: |
Role of a complex containing Rad17, Mec3, and Ddc1 in the yeast DNA damage checkpoint pathway. |
Volume: |
19 |
Issue: |
2 |
Pages: |
1136-43 |
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•
•
•
•
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Publication |
First Author: |
Navadgi-Patil VM |
Year: |
2009 |
Journal: |
Mol Cell |
Title: |
The unstructured C-terminal tail of the 9-1-1 clamp subunit Ddc1 activates Mec1/ATR via two distinct mechanisms. |
Volume: |
36 |
Issue: |
5 |
Pages: |
743-53 |
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•
•
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•
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Publication |
First Author: |
Majka J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Yeast Rad17/Mec3/Ddc1: a sliding clamp for the DNA damage checkpoint. |
Volume: |
100 |
Issue: |
5 |
Pages: |
2249-54 |
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•
•
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•
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Publication |
First Author: |
Velocigene |
Year: |
2008 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
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•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
Data Curation Using Mouse Genome Assembly |
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|
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•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Function or Process or Component Unknown following Literature Review |
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•
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Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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•
•
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•
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Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
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