Type |
Details |
Score |
Publication |
First Author: |
Kaur N |
Year: |
2020 |
Journal: |
Neuron |
Title: |
Neural Stem Cells Direct Axon Guidance via Their Radial Fiber Scaffold. |
Volume: |
107 |
Issue: |
6 |
Pages: |
1197-1211.e9 |
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•
•
•
•
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Publication |
First Author: |
Kuwako K |
Year: |
2010 |
Journal: |
Neuron |
Title: |
Neural RNA-binding protein Musashi1 controls midline crossing of precerebellar neurons through posttranscriptional regulation of Robo3/Rig-1 expression. |
Volume: |
67 |
Issue: |
3 |
Pages: |
407-21 |
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•
•
•
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Publication |
First Author: |
Chapouton P |
Year: |
2001 |
Journal: |
Development |
Title: |
The transcription factor neurogenin 2 restricts cell migration from the cortex to the striatum. |
Volume: |
128 |
Issue: |
24 |
Pages: |
5149-59 |
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•
•
•
•
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Publication |
First Author: |
Tole S |
Year: |
2006 |
Journal: |
Dev Biol |
Title: |
Development of midline cell types and commissural axon tracts requires Fgfr1 in the cerebrum. |
Volume: |
289 |
Issue: |
1 |
Pages: |
141-51 |
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•
•
•
•
•
|
Publication |
First Author: |
Kadison SR |
Year: |
2006 |
Journal: |
Dev Biol |
Title: |
The role of floor plate contact in the elaboration of contralateral commissural projections within the embryonic mouse spinal cord. |
Volume: |
296 |
Issue: |
2 |
Pages: |
499-513 |
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•
•
•
•
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Publication |
First Author: |
Tanigawa S |
Year: |
2022 |
Journal: |
Nat Commun |
Title: |
Generation of the organotypic kidney structure by integrating pluripotent stem cell-derived renal stroma. |
Volume: |
13 |
Issue: |
1 |
Pages: |
611 |
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•
•
•
•
|
Publication |
First Author: |
Steele-Perkins G |
Year: |
2005 |
Journal: |
Mol Cell Biol |
Title: |
The transcription factor gene Nfib is essential for both lung maturation and brain development. |
Volume: |
25 |
Issue: |
2 |
Pages: |
685-98 |
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•
•
•
•
•
|
Publication |
First Author: |
Lee H |
Year: |
2015 |
Journal: |
Exp Neurol |
Title: |
Slit and Semaphorin signaling governed by Islet transcription factors positions motor neuron somata within the neural tube. |
Volume: |
269 |
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Pages: |
17-27 |
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•
•
•
•
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Publication |
First Author: |
Yeh ML |
Year: |
2014 |
Journal: |
J Neurosci |
Title: |
Robo1 modulates proliferation and neurogenesis in the developing neocortex. |
Volume: |
34 |
Issue: |
16 |
Pages: |
5717-31 |
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•
•
•
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Publication |
First Author: |
Escalante A |
Year: |
2013 |
Journal: |
Neuron |
Title: |
Zic2-dependent axon midline avoidance controls the formation of major ipsilateral tracts in the CNS. |
Volume: |
80 |
Issue: |
6 |
Pages: |
1392-406 |
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•
•
•
•
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Publication |
First Author: |
Reginensi A |
Year: |
2015 |
Journal: |
Development |
Title: |
Yap and Taz are required for Ret-dependent urinary tract morphogenesis. |
Volume: |
142 |
Issue: |
15 |
Pages: |
2696-703 |
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•
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•
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Publication |
First Author: |
Bai G |
Year: |
2011 |
Journal: |
Cell |
Title: |
Presenilin-dependent receptor processing is required for axon guidance. |
Volume: |
144 |
Issue: |
1 |
Pages: |
106-18 |
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•
•
•
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Publication |
First Author: |
van de Haar LL |
Year: |
2022 |
Journal: |
Cell Rep |
Title: |
Molecular signatures and cellular diversity during mouse habenula development. |
Volume: |
40 |
Issue: |
1 |
Pages: |
111029 |
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Publication |
First Author: |
Jin Y |
Year: |
2022 |
Journal: |
Hum Mol Genet |
Title: |
Loss of BAF (mSWI/SNF) chromatin-remodeling ATPase Brg1 causes multiple malformations of cortical development in mice. |
Volume: |
31 |
Issue: |
20 |
Pages: |
3504-3520 |
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•
•
•
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Publication |
First Author: |
Cargnin F |
Year: |
2018 |
Journal: |
Neuron |
Title: |
FOXG1 Orchestrates Neocortical Organization and Cortico-Cortical Connections. |
Volume: |
100 |
Issue: |
5 |
Pages: |
1083-1096.e5 |
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•
•
•
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Publication |
First Author: |
Borrell V |
Year: |
2012 |
Journal: |
Neuron |
Title: |
Slit/Robo signaling modulates the proliferation of central nervous system progenitors. |
Volume: |
76 |
Issue: |
2 |
Pages: |
338-52 |
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•
•
•
•
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Publication |
First Author: |
Cárdenas A |
Year: |
2018 |
Journal: |
Cell |
Title: |
Evolution of Cortical Neurogenesis in Amniotes Controlled by Robo Signaling Levels. |
Volume: |
174 |
Issue: |
3 |
Pages: |
590-606.e21 |
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•
•
•
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Publication |
First Author: |
Filova I |
Year: |
2022 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
ISL1 is necessary for auditory neuron development and contributes toward tonotopic organization. |
Volume: |
119 |
Issue: |
37 |
Pages: |
e2207433119 |
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•
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Publication |
First Author: |
Ding YQ |
Year: |
2004 |
Journal: |
Development |
Title: |
Lmx1b controls the differentiation and migration of the superficial dorsal horn neurons of the spinal cord. |
Volume: |
131 |
Issue: |
15 |
Pages: |
3693-703 |
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•
•
•
•
•
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Publication |
First Author: |
Li MZ |
Year: |
2006 |
Journal: |
Dev Biol |
Title: |
Molecular mapping of developing dorsal horn-enriched genes by microarray and dorsal/ventral subtractive screening. |
Volume: |
292 |
Issue: |
2 |
Pages: |
555-64 |
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•
•
•
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Publication |
First Author: |
Xu C |
Year: |
2008 |
Journal: |
Gene Expr Patterns |
Title: |
Expression of Robo/Slit and Semaphorin/Plexin/Neuropilin family members in the developing hypothalamic paraventricular and supraoptic nuclei. |
Volume: |
8 |
Issue: |
7-8 |
Pages: |
502-7 |
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•
•
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Publication |
First Author: |
Rugg-Gunn PJ |
Year: |
2012 |
Journal: |
Dev Cell |
Title: |
Cell-surface proteomics identifies lineage-specific markers of embryo-derived stem cells. |
Volume: |
22 |
Issue: |
4 |
Pages: |
887-901 |
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•
•
•
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Publication |
First Author: |
Cotney J |
Year: |
2012 |
Journal: |
Genome Res |
Title: |
Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb. |
Volume: |
22 |
Issue: |
6 |
Pages: |
1069-80 |
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•
•
•
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Publication |
First Author: |
Botella-López A |
Year: |
2019 |
Journal: |
Brain Struct Funct |
Title: |
Radial glia fibers translate Fgf8 morphogenetic signals to generate a thalamic nuclear complex protomap in the mantle layer. |
Volume: |
224 |
Issue: |
2 |
Pages: |
661-679 |
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•
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Publication |
First Author: |
Ramirez M |
Year: |
2022 |
Journal: |
Elife |
Title: |
Temporal analysis of enhancers during mouse cerebellar development reveals dynamic and novel regulatory functions. |
Volume: |
11 |
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•
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Publication |
First Author: |
Gannoun L |
Year: |
2023 |
Journal: |
Development |
Title: |
Axon guidance genes control hepatic artery development. |
Volume: |
150 |
Issue: |
16 |
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•
•
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Publication |
First Author: |
Hoch RV |
Year: |
2015 |
Journal: |
Cell Rep |
Title: |
OTX2 Transcription Factor Controls Regional Patterning within the Medial Ganglionic Eminence and Regional Identity of the Septum. |
Volume: |
12 |
Issue: |
3 |
Pages: |
482-94 |
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Publication |
First Author: |
Branchfield K |
Year: |
2016 |
Journal: |
Science |
Title: |
Pulmonary neuroendocrine cells function as airway sensors to control lung immune response. |
Volume: |
351 |
Issue: |
6274 |
Pages: |
707-10 |
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Publication |
First Author: |
Magnani D |
Year: |
2015 |
Journal: |
Hum Mol Genet |
Title: |
The ciliogenic transcription factor Rfx3 is required for the formation of the thalamocortical tract by regulating the patterning of prethalamus and ventral telencephalon. |
Volume: |
24 |
Issue: |
9 |
Pages: |
2578-93 |
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Publication |
First Author: |
Whiley PAF |
Year: |
2020 |
Journal: |
Endocrinology |
Title: |
Activin A Determines Steroid Levels and Composition in the Fetal Testis. |
Volume: |
161 |
Issue: |
7 |
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Publication |
First Author: |
Neirijnck Y |
Year: |
2018 |
Journal: |
Kidney Int |
Title: |
Sox11 gene disruption causes congenital anomalies of the kidney and urinary tract (CAKUT). |
Volume: |
93 |
Issue: |
5 |
Pages: |
1142-1153 |
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Publication |
First Author: |
Karpinski BA |
Year: |
2014 |
Journal: |
Dis Model Mech |
Title: |
Dysphagia and disrupted cranial nerve development in a mouse model of DiGeorge (22q11) deletion syndrome. |
Volume: |
7 |
Issue: |
2 |
Pages: |
245-57 |
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Publication |
First Author: |
Yan K |
Year: |
2023 |
Journal: |
Cereb Cortex |
Title: |
TrkB-dependent EphrinA reverse signaling regulates callosal axon fasciculate growth downstream of Neurod2/6. |
Volume: |
33 |
Issue: |
5 |
Pages: |
1752-1767 |
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First Author: |
Chen A |
Year: |
2022 |
Journal: |
Cell |
Title: |
Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball-patterned arrays. |
Volume: |
185 |
Issue: |
10 |
Pages: |
1777-1792.e21 |
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First Author: |
Elsen GE |
Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map. |
Volume: |
110 |
Issue: |
10 |
Pages: |
4081-6 |
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First Author: |
Telley L |
Year: |
2019 |
Journal: |
Science |
Title: |
Temporal patterning of apical progenitors and their daughter neurons in the developing neocortex. |
Volume: |
364 |
Issue: |
6440 |
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First Author: |
Ye Q |
Year: |
2022 |
Journal: |
Development |
Title: |
Understanding the development of oral epithelial organs through single cell transcriptomic analysis. |
Volume: |
149 |
Issue: |
16 |
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First Author: |
Soleilhavoup C |
Year: |
2020 |
Journal: |
Nat Commun |
Title: |
Nolz1 expression is required in dopaminergic axon guidance and striatal innervation. |
Volume: |
11 |
Issue: |
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First Author: |
Long JE |
Year: |
2009 |
Journal: |
Cereb Cortex |
Title: |
Dlx1&2 and Mash1 transcription factors control MGE and CGE patterning and differentiation through parallel and overlapping pathways. |
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First Author: |
Long JE |
Year: |
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Journal: |
J Comp Neurol |
Title: |
Dlx1&2 and Mash1 transcription factors control striatal patterning and differentiation through parallel and overlapping pathways. |
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512 |
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556-72 |
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First Author: |
Chen B |
Year: |
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Journal: |
Proc Natl Acad Sci U S A |
Title: |
Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex. |
Volume: |
102 |
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First Author: |
Copeland NG |
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Title: |
Copeland-Jenkins (Frederick) Interspecific Backcross Mapping Data |
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First Author: |
Oeschger FM |
Year: |
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Journal: |
Cereb Cortex |
Title: |
Gene expression analysis of the embryonic subplate. |
Volume: |
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Brain Res Mol Brain Res |
Title: |
A neurogenomics approach to gene expression analysis in the developing brain. |
Volume: |
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First Author: |
Okazaki N |
Year: |
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Journal: |
DNA Res |
Title: |
Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. |
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10 |
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First Author: |
Memic F |
Year: |
2018 |
Journal: |
Gastroenterology |
Title: |
Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System. |
Volume: |
154 |
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624-636 |
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First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
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Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
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First Author: |
MGI and IMPC |
Year: |
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Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
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First Author: |
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Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
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First Author: |
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Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
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Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
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The Gene Ontology Consortium |
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Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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PLoS Biol |
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Mouse Genome Informatics Scientific Curators |
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Proc Natl Acad Sci U S A |
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Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
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Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
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Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Mouse Genome Informatics Computational Sequence to Gene Associations |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Publication |
First Author: |
Yamamoto N |
Year: |
2019 |
Journal: |
J Biol Chem |
Title: |
Robo2 contains a cryptic binding site for neural EGFL-like (NELL) protein 1/2. |
Volume: |
294 |
Issue: |
12 |
Pages: |
4693-4703 |
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Publication |
First Author: |
Yue Y |
Year: |
2006 |
Journal: |
Genomics |
Title: |
Isolation and differential expression of two isoforms of the ROBO2/Robo2 axon guidance receptor gene in humans and mice. |
Volume: |
88 |
Issue: |
6 |
Pages: |
772-778 |
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Regulatory Region |
Type: |
enhancer |
Organism: |
mouse, laboratory |
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Publication |
First Author: |
James G |
Year: |
2014 |
Journal: |
Brain Struct Funct |
Title: |
The E3 ubiquitin ligase Mycbp2 genetically interacts with Robo2 to modulate axon guidance in the mouse olfactory system. |
Volume: |
219 |
Issue: |
3 |
Pages: |
861-74 |
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GXD Expression |
Probe: |
MGI:2153065 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-03-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754421 |
Pattern: |
Not Specified |
Stage: |
TS21 |
Assay Id: |
MGI:5752757 |
Age: |
embryonic day 13.5 |
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Note: |
Expressed in the cortical interneurons. There was a decrease in the total number of labeled cells relative to an animal which was heterozygote for both Robo1 and Robo2 receptors and fully deficient for the Robo3 receptor. |
Specimen Label: |
not shown |
Detected: |
true |
Specimen Num: |
10 |
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HT Experiment |
Series Id: |
GSE47953 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
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Publication |
First Author: |
Xian J |
Year: |
2001 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Inadequate lung development and bronchial hyperplasia in mice with a targeted deletion in the Dutt1/Robo1 gene. |
Volume: |
98 |
Issue: |
26 |
Pages: |
15062-6 |
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Publication |
First Author: |
Ballard MS |
Year: |
2012 |
Journal: |
Adv Cancer Res |
Title: |
A roundabout way to cancer. |
Volume: |
114 |
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Pages: |
187-235 |
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Protein Domain |
Type: |
Family |
Description: |
The secreted Slit repellents and their Roundabout (Robo) receptors were originally identified as important axon guidance molecules. The SLIT-ROBO interaction has been found to be involved in the regulation of cell migration, cell death and angiogenesis and, as such, has a pivotal role during the development of other tissues such as the lung, kidney, liver and breast []. There are four Robo homologues in vertebrates (Robo1-4).Robo1 and Robo2 are known to play a crucial role in axon guidance [, ]. They overlap to cooperate in guiding longitudinal axons, but each isoform has specialised functions in spinal commissural axon guidance [, ]. Robo1 prevents axonal stalling after crossing []. Robo1 may also be involved in lung []and heart development [, ].Deregulation of Robo is implicated in several neuropathological conditions and cancers []. |
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HT Experiment |
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Experiment Type: |
RNA-Seq |
Study Type: |
Baseline |
Source: |
GEO |
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Publication |
First Author: |
Kim H |
Year: |
2018 |
Journal: |
Biochem Biophys Res Commun |
Title: |
SLIT3 regulates endochondral ossification by β-catenin suppression in chondrocytes. |
Volume: |
506 |
Issue: |
4 |
Pages: |
847-853 |
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Publication |
First Author: |
Dickinson RE |
Year: |
2010 |
Journal: |
Reproduction |
Title: |
The SLIT-ROBO pathway: a regulator of cell function with implications for the reproductive system. |
Volume: |
139 |
Issue: |
4 |
Pages: |
697-704 |
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Publication |
First Author: |
Soplop NH |
Year: |
2012 |
Journal: |
Dev Dyn |
Title: |
Roundabout is required in the visceral mesoderm for proper microvillus length in the hindgut epithelium. |
Volume: |
241 |
Issue: |
4 |
Pages: |
759-69 |
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Publication |
First Author: |
Yang YH |
Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Intraislet SLIT-ROBO signaling is required for beta-cell survival and potentiates insulin secretion. |
Volume: |
110 |
Issue: |
41 |
Pages: |
16480-5 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
133
|
Fragment?: |
true |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
131
|
Fragment?: |
false |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
293
|
Fragment?: |
true |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
392
|
Fragment?: |
false |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
173
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Fragment?: |
true |
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