Type |
Details |
Score |
Publication |
First Author: |
Steward R |
Year: |
1987 |
Journal: |
Science |
Title: |
Dorsal, an embryonic polarity gene in Drosophila, is homologous to the vertebrate proto-oncogene, c-rel. |
Volume: |
238 |
Issue: |
4827 |
Pages: |
692-4 |
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•
•
•
•
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Publication |
First Author: |
Ip YT |
Year: |
1993 |
Journal: |
Cell |
Title: |
Dif, a dorsal-related gene that mediates an immune response in Drosophila. |
Volume: |
75 |
Issue: |
4 |
Pages: |
753-63 |
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•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
The Dorsal morphogen directs formation of the Drosophila dorsoventral axis by both activating and repressing transcription. It contains an N-terminal Rel homology domain (RHD), which is responsible for DNA binding and regulated nuclear import, and a C-terminal domain (CTD) that contains activation and repression motifs []. In wild-type embryos, the dorsal protein is found in the cytoplasm during cleavage. After the nuclei migrate to the periphery of the embryo, a ventral-to-dorsal gradient of nuclear dorsal protein is established [].Dorsal-related immunity factor Dif does not appear to participate in dorsoventral patterning, but instead mediates an immune response in Drosophila larvae. Dif is normally localised in the cytoplasm of the larval fat body, but quickly accumulates in the nucleus upon bacterial infection or injury. Once in the nucleus, Dif binds to kappa B-like sequence motifs present in promoter regions of immunity genes []. |
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Publication |
First Author: |
Pan S |
Year: |
1997 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Molecular cloning and functional characterization of murine cDNA encoding transcription factor NFATc. |
Volume: |
240 |
Issue: |
2 |
Pages: |
314-23 |
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•
•
•
•
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Publication |
First Author: |
Tanabe S |
Year: |
1997 |
Journal: |
J Immunol |
Title: |
Identification of a new mouse beta-chemokine, thymus-derived chemotactic agent 4, with activity on T lymphocytes and mesangial cells. |
Volume: |
159 |
Issue: |
11 |
Pages: |
5671-9 |
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•
•
•
•
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Publication |
First Author: |
Simeonidis S |
Year: |
1997 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Cloning and functional characterization of mouse IkappaBepsilon. |
Volume: |
94 |
Issue: |
26 |
Pages: |
14372-7 |
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•
•
•
•
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Publication |
First Author: |
Jin R |
Year: |
2002 |
Journal: |
DNA Cell Biol |
Title: |
Regulation of the gadd45beta promoter by NF-kappaB. |
Volume: |
21 |
Issue: |
7 |
Pages: |
491-503 |
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•
•
•
•
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Publication |
First Author: |
Ali S |
Year: |
2011 |
Journal: |
J Immunol |
Title: |
The dual function cytokine IL-33 interacts with the transcription factor NF-κB to dampen NF-κB-stimulated gene transcription. |
Volume: |
187 |
Issue: |
4 |
Pages: |
1609-16 |
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•
•
•
•
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Publication |
First Author: |
Bettelli E |
Year: |
2005 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Foxp3 interacts with nuclear factor of activated T cells and NF-kappa B to repress cytokine gene expression and effector functions of T helper cells. |
Volume: |
102 |
Issue: |
14 |
Pages: |
5138-43 |
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•
•
•
•
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Publication |
First Author: |
Ho SN |
Year: |
1995 |
Journal: |
J Biol Chem |
Title: |
NFATc3, a lymphoid-specific NFATc family member that is calcium-regulated and exhibits distinct DNA binding specificity. |
Volume: |
270 |
Issue: |
34 |
Pages: |
19898-907 |
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•
•
•
•
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Publication |
First Author: |
Plyte S |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Identification and characterization of a novel nuclear factor of activated T-cells-1 isoform expressed in mouse brain. |
Volume: |
276 |
Issue: |
17 |
Pages: |
14350-8 |
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•
•
•
•
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Publication |
First Author: |
Deloukas P |
Year: |
1993 |
Journal: |
Hum Mol Genet |
Title: |
Genomic organization of the gene encoding the p65 subunit of NF-kappa B: multiple variants of the p65 protein may be generated by alternative splicing. |
Volume: |
2 |
Issue: |
11 |
Pages: |
1895-900 |
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•
•
•
•
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Publication |
First Author: |
Rosenfeld ME |
Year: |
2000 |
Journal: |
Am J Pathol |
Title: |
Prevention of hepatic apoptosis and embryonic lethality in RelA/TNFR-1 double knockout mice. |
Volume: |
156 |
Issue: |
3 |
Pages: |
997-1007 |
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•
•
•
•
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Publication |
First Author: |
Silva A |
Year: |
2014 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
NF-κB signaling mediates homeostatic maturation of new T cells. |
Volume: |
111 |
Issue: |
9 |
Pages: |
E846-55 |
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•
•
•
•
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Publication |
First Author: |
Yamada T |
Year: |
2000 |
Journal: |
J Immunol |
Title: |
Abnormal immune function of hemopoietic cells from alymphoplasia (aly) mice, a natural strain with mutant NF-kappa B-inducing kinase. |
Volume: |
165 |
Issue: |
2 |
Pages: |
804-12 |
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•
•
•
•
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Publication |
First Author: |
Liou HC |
Year: |
1994 |
Journal: |
Mol Cell Biol |
Title: |
Sequential induction of NF-kappa B/Rel family proteins during B-cell terminal differentiation. |
Volume: |
14 |
Issue: |
8 |
Pages: |
5349-59 |
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•
•
•
•
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Publication |
First Author: |
Takadera M |
Year: |
2020 |
Journal: |
Acta Neuropathol Commun |
Title: |
Phenotypic characterization with somatic genome editing and gene transfer reveals the diverse oncogenicity of ependymoma fusion genes. |
Volume: |
8 |
Issue: |
1 |
Pages: |
203 |
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•
•
•
•
•
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Publication |
First Author: |
Tapryal N |
Year: |
2021 |
Journal: |
J Biol Chem |
Title: |
Intrapulmonary administration of purified NEIL2 abrogates NF-κB-mediated inflammation. |
Volume: |
296 |
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Pages: |
100723 |
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•
•
•
•
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Publication |
First Author: |
Vogel CF |
Year: |
2014 |
Journal: |
J Biol Chem |
Title: |
Cross-talk between aryl hydrocarbon receptor and the inflammatory response: a role for nuclear factor-κB. |
Volume: |
289 |
Issue: |
3 |
Pages: |
1866-75 |
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•
•
•
•
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Publication |
First Author: |
Redd PS |
Year: |
2017 |
Journal: |
Cancer Res |
Title: |
SETD1B Activates iNOS Expression in Myeloid-Derived Suppressor Cells. |
Volume: |
77 |
Issue: |
11 |
Pages: |
2834-2843 |
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•
•
•
•
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Publication |
First Author: |
Dai YS |
Year: |
2005 |
Journal: |
Mol Cell Biol |
Title: |
The DnaJ-related factor Mrj interacts with nuclear factor of activated T cells c3 and mediates transcriptional repression through class II histone deacetylase recruitment. |
Volume: |
25 |
Issue: |
22 |
Pages: |
9936-48 |
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•
•
•
•
•
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Publication |
First Author: |
Dunn SM |
Year: |
1994 |
Journal: |
Blood |
Title: |
Requirement for nuclear factor (NF)-kappa B p65 and NF-interleukin-6 binding elements in the tumor necrosis factor response region of the granulocyte colony-stimulating factor promoter. |
Volume: |
83 |
Issue: |
9 |
Pages: |
2469-79 |
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•
•
•
•
•
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Publication |
First Author: |
Yao GQ |
Year: |
2000 |
Journal: |
Endocrinology |
Title: |
Nuclear factor-kappaB p50 is required for tumor necrosis factor-alpha-induced colony-stimulating factor-1 gene expression in osteoblasts. |
Volume: |
141 |
Issue: |
8 |
Pages: |
2914-22 |
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•
•
•
•
|
Publication |
First Author: |
Masuda ES |
Year: |
1995 |
Journal: |
Mol Cell Biol |
Title: |
NFATx, a novel member of the nuclear factor of activated T cells family that is expressed predominantly in the thymus. |
Volume: |
15 |
Issue: |
5 |
Pages: |
2697-706 |
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•
•
•
•
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Publication |
First Author: |
Murphy TL |
Year: |
1995 |
Journal: |
Mol Cell Biol |
Title: |
Regulation of interleukin 12 p40 expression through an NF-kappa B half-site. |
Volume: |
15 |
Issue: |
10 |
Pages: |
5258-67 |
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•
•
•
•
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Publication |
First Author: |
Wu M |
Year: |
1996 |
Journal: |
EMBO J |
Title: |
Inhibition of NF-kappaB/Rel induces apoptosis of murine B cells. |
Volume: |
15 |
Issue: |
17 |
Pages: |
4682-90 |
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•
•
•
•
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Publication |
First Author: |
Rao A |
Year: |
1997 |
Journal: |
Annu Rev Immunol |
Title: |
Transcription factors of the NFAT family: regulation and function. |
Volume: |
15 |
|
Pages: |
707-47 |
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•
•
•
•
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Publication |
First Author: |
Zhao W |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
SIMPL enhancement of tumor necrosis factor-α dependent p65-MED1 complex formation is required for mammalian hematopoietic stem and progenitor cell function. |
Volume: |
8 |
Issue: |
4 |
Pages: |
e61123 |
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•
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•
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Publication |
First Author: |
Johnson ZI |
Year: |
2017 |
Journal: |
J Biol Chem |
Title: |
TNF-α promotes nuclear enrichment of the transcription factor TonEBP/NFAT5 to selectively control inflammatory but not osmoregulatory responses in nucleus pulposus cells. |
Volume: |
292 |
Issue: |
42 |
Pages: |
17561-17575 |
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•
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•
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Publication |
First Author: |
Kogure Y |
Year: |
2022 |
Journal: |
Blood |
Title: |
Whole-genome landscape of adult T-cell leukemia/lymphoma. |
Volume: |
139 |
Issue: |
7 |
Pages: |
967-982 |
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•
•
•
•
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Publication |
First Author: |
Bushdid PB |
Year: |
2003 |
Journal: |
Circ Res |
Title: |
NFATc3 and NFATc4 are required for cardiac development and mitochondrial function. |
Volume: |
92 |
Issue: |
12 |
Pages: |
1305-13 |
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•
•
•
•
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Publication |
First Author: |
Wu H |
Year: |
2007 |
Journal: |
J Biol Chem |
Title: |
Down syndrome critical region-1 is a transcriptional target of nuclear factor of activated T cells-c1 within the endocardium during heart development. |
Volume: |
282 |
Issue: |
42 |
Pages: |
30673-9 |
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•
•
•
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Publication |
First Author: |
Rivaud MR |
Year: |
2020 |
Journal: |
Europace |
Title: |
Functional modulation of atrio-ventricular conduction by enhanced late sodium current and calcium-dependent mechanisms in Scn5a1798insD/+ mice. |
Volume: |
22 |
Issue: |
10 |
Pages: |
1579-1589 |
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•
•
•
•
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Publication |
First Author: |
Zuklys S |
Year: |
2000 |
Journal: |
J Immunol |
Title: |
Normal thymic architecture and negative selection are associated with Aire expression, the gene defective in the autoimmune-polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED). |
Volume: |
165 |
Issue: |
4 |
Pages: |
1976-83 |
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•
•
•
•
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Publication |
First Author: |
Bourteele S |
Year: |
2007 |
Journal: |
Cell Microbiol |
Title: |
Alteration of NF-kappaB activity leads to mitochondrial apoptosis after infection with pathological prion protein. |
Volume: |
9 |
Issue: |
9 |
Pages: |
2202-17 |
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•
•
•
•
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Publication |
First Author: |
DeKoning J |
Year: |
1997 |
Journal: |
J Immunol |
Title: |
Thymic cortical epithelium is sufficient for the development of mature T cells in relB-deficient mice. |
Volume: |
158 |
Issue: |
6 |
Pages: |
2558-66 |
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•
•
•
•
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Publication |
First Author: |
Dietz L |
Year: |
2015 |
Journal: |
Eur J Immunol |
Title: |
NFAT1 deficit and NFAT2 deficit attenuate EAE via different mechanisms. |
Volume: |
45 |
Issue: |
5 |
Pages: |
1377-89 |
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•
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•
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Publication |
First Author: |
Qin J |
Year: |
2007 |
Journal: |
J Immunol |
Title: |
Developmental stage-dependent collaboration between the TNF receptor-associated factor 6 and lymphotoxin pathways for B cell follicle organization in secondary lymphoid organs. |
Volume: |
179 |
Issue: |
10 |
Pages: |
6799-807 |
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•
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Publication |
First Author: |
Akiyama T |
Year: |
2008 |
Journal: |
Immunity |
Title: |
The tumor necrosis factor family receptors RANK and CD40 cooperatively establish the thymic medullary microenvironment and self-tolerance. |
Volume: |
29 |
Issue: |
3 |
Pages: |
423-37 |
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•
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•
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Publication |
First Author: |
Oldstone MB |
Year: |
2002 |
Journal: |
J Virol |
Title: |
Lymphotoxin-alpha- and lymphotoxin-beta-deficient mice differ in susceptibility to scrapie: evidence against dendritic cell involvement in neuroinvasion. |
Volume: |
76 |
Issue: |
9 |
Pages: |
4357-63 |
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Publication |
First Author: |
Roberts NA |
Year: |
2012 |
Journal: |
Immunity |
Title: |
Rank signaling links the development of invariant γδ T cell progenitors and Aire(+) medullary epithelium. |
Volume: |
36 |
Issue: |
3 |
Pages: |
427-37 |
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Publication |
First Author: |
Lucas B |
Year: |
2023 |
Journal: |
Nat Commun |
Title: |
Embryonic keratin19(+) progenitors generate multiple functionally distinct progeny to maintain epithelial diversity in the adult thymus medulla. |
Volume: |
14 |
Issue: |
1 |
Pages: |
2066 |
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Publication |
First Author: |
Arron JR |
Year: |
2006 |
Journal: |
Nature |
Title: |
NFAT dysregulation by increased dosage of DSCR1 and DYRK1A on chromosome 21. |
Volume: |
441 |
Issue: |
7093 |
Pages: |
595-600 |
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•
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Publication |
First Author: |
Berland R |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Normal B-1a cell development requires B cell-intrinsic NFATc1 activity. |
Volume: |
100 |
Issue: |
23 |
Pages: |
13459-64 |
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•
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Publication |
First Author: |
Graef IA |
Year: |
2003 |
Journal: |
Cell |
Title: |
Neurotrophins and netrins require calcineurin/NFAT signaling to stimulate outgrowth of embryonic axons. |
Volume: |
113 |
Issue: |
5 |
Pages: |
657-70 |
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Publication |
First Author: |
White AJ |
Year: |
2014 |
Journal: |
J Immunol |
Title: |
An essential role for medullary thymic epithelial cells during the intrathymic development of invariant NKT cells. |
Volume: |
192 |
Issue: |
6 |
Pages: |
2659-66 |
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Publication |
First Author: |
Castiglioni P |
Year: |
2008 |
Journal: |
J Immunol |
Title: |
Protection against influenza A virus by memory CD8 T cells requires reactivation by bone marrow-derived dendritic cells. |
Volume: |
180 |
Issue: |
7 |
Pages: |
4956-64 |
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Publication |
First Author: |
O'Sullivan BJ |
Year: |
2011 |
Journal: |
J Immunol |
Title: |
Immunotherapy with costimulatory dendritic cells to control autoimmune inflammation. |
Volume: |
187 |
Issue: |
8 |
Pages: |
4018-30 |
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Publication |
First Author: |
Jin J |
Year: |
2014 |
Journal: |
Immunity |
Title: |
Noncanonical NF-κB pathway controls the production of type I interferons in antiviral innate immunity. |
Volume: |
40 |
Issue: |
3 |
Pages: |
342-54 |
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Publication |
First Author: |
Li J |
Year: |
2007 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Developmental pathway of CD4+CD8- medullary thymocytes during mouse ontogeny and its defect in Aire-/- mice. |
Volume: |
104 |
Issue: |
46 |
Pages: |
18175-80 |
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•
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Publication |
First Author: |
Naspetti M |
Year: |
1997 |
Journal: |
Eur J Immunol |
Title: |
Thymocytes and RelB-dependent medullary epithelial cells provide growth-promoting and organization signals, respectively, to thymic medullary stromal cells. |
Volume: |
27 |
Issue: |
6 |
Pages: |
1392-7 |
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•
|
Genotype |
Symbol: |
Nfatc2/Nfatc2 Nfatc3/Nfatc3 Nfatc4/Nfatc4 |
Background: |
involves: 129S2/SvPas |
Zygosity: |
cx |
Has Mutant Allele: |
true |
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•
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Publication |
First Author: |
Ohmori Y |
Year: |
1995 |
Journal: |
J Immunol |
Title: |
Two structurally distinct kappa B sequence motifs cooperatively control LPS-induced KC gene transcription in mouse macrophages. |
Volume: |
155 |
Issue: |
7 |
Pages: |
3593-600 |
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•
•
•
•
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Publication |
First Author: |
Grumont RJ |
Year: |
1994 |
Journal: |
Mol Cell Biol |
Title: |
Alternate RNA splicing of murine nfkb1 generates a nuclear isoform of the p50 precursor NF-kappa B1 that can function as a transactivator of NF-kappa B-regulated transcription. |
Volume: |
14 |
Issue: |
12 |
Pages: |
8460-70 |
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•
•
•
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Publication |
First Author: |
Helmer RA |
Year: |
2021 |
Journal: |
PLoS One |
Title: |
Helicase-like transcription factor-deletion from the tumor microenvironment in a cell line-derived xenograft model of colorectal cancer reprogrammed the human transcriptome-S-nitroso-proteome to promote inflammation and redirect metastasis. |
Volume: |
16 |
Issue: |
5 |
Pages: |
e0251132 |
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•
•
•
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Publication |
First Author: |
Liu Q |
Year: |
2012 |
Journal: |
Circ Res |
Title: |
Interaction between NFκB and NFAT coordinates cardiac hypertrophy and pathological remodeling. |
Volume: |
110 |
Issue: |
8 |
Pages: |
1077-86 |
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•
•
•
•
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Publication |
First Author: |
Dawn B |
Year: |
2001 |
Journal: |
J Mol Cell Cardiol |
Title: |
Cardiac-specific abrogation of NF- kappa B activation in mice by transdominant expression of a mutant I kappa B alpha. |
Volume: |
33 |
Issue: |
1 |
Pages: |
161-73 |
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•
•
•
•
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Publication |
First Author: |
Tebo JM |
Year: |
1994 |
Journal: |
J Immunol |
Title: |
Murine inhibitory protein-kappa B alpha negatively regulates kappa B-dependent transcription in lipopolysaccharide-stimulated RAW 264.7 macrophages. |
Volume: |
153 |
Issue: |
10 |
Pages: |
4713-20 |
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•
•
•
•
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Publication |
First Author: |
Piette J |
Year: |
1997 |
Journal: |
Biol Chem |
Title: |
Multiple redox regulation in NF-kappaB transcription factor activation. |
Volume: |
378 |
Issue: |
11 |
Pages: |
1237-45 |
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•
•
•
•
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Publication |
First Author: |
Neumann M |
Year: |
2007 |
Journal: |
FASEB J |
Title: |
Beyond IkappaBs: alternative regulation of NF-kappaB activity. |
Volume: |
21 |
Issue: |
11 |
Pages: |
2642-54 |
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•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
NF-kappa B proteins are part of a protein complex that acts as a transcription factor, which is responsible for regulating a host of cellular responses to a variety of stimuli. This complex tightly regulates the expression of a large number of genes, and is involved in processes such as adaptive and innate immunity, stress response, inflammation, cell adhesion, proliferation and apoptosis. The cytosolic NF-kappa B complex is activated via phosphorylation of the ankyrin-repeat containing inhibitory protein I-kappa B, which dissociates from the complex and exposes the nuclear localization signal of the heterodimer (NF-kappa B and Rel) [, ]. c-Rel plays an important role in B cell proliferation and survival [].Proteins containing the Rel homology domain (RHD) are metazoan transcription factors. The RHD is composed of two structural sub-domains. This entry represents the N-terminal RHD sub-domain of the c-Rel family of transcription factors, categorized as a class II member of the NF-kappa B family. In class II NF-kappa Bs, the RHD domain co-occurs with a C-terminal transactivation domain (TAD) [, ]. |
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•
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Publication |
First Author: |
Becker M |
Year: |
2009 |
Journal: |
J Immunol |
Title: |
Impaired mast cell-driven immune responses in mice lacking the transcription factor NFATc2. |
Volume: |
182 |
Issue: |
10 |
Pages: |
6136-42 |
|
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•
•
•
•
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Publication |
First Author: |
Guo F |
Year: |
2008 |
Journal: |
Blood |
Title: |
Lack of nuclear factor-kappa B2/p100 causes a RelB-dependent block in early B lymphopoiesis. |
Volume: |
112 |
Issue: |
3 |
Pages: |
551-9 |
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•
•
•
•
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Publication |
First Author: |
Nicholson CK |
Year: |
2013 |
Journal: |
J Mol Cell Cardiol |
Title: |
Chronic exercise downregulates myocardial myoglobin and attenuates nitrite reductase capacity during ischemia-reperfusion. |
Volume: |
64 |
|
Pages: |
1-10 |
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•
•
•
•
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Publication |
First Author: |
Xiu Y |
Year: |
2014 |
Journal: |
J Clin Invest |
Title: |
Chloroquine reduces osteoclastogenesis in murine osteoporosis by preventing TRAF3 degradation. |
Volume: |
124 |
Issue: |
1 |
Pages: |
297-310 |
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•
•
•
•
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Publication |
First Author: |
Klein-Hessling S |
Year: |
2017 |
Journal: |
Nat Commun |
Title: |
NFATc1 controls the cytotoxicity of CD8+ T cells. |
Volume: |
8 |
Issue: |
1 |
Pages: |
511 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vaeth M |
Year: |
2012 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Dependence on nuclear factor of activated T-cells (NFAT) levels discriminates conventional T cells from Foxp3+ regulatory T cells. |
Volume: |
109 |
Issue: |
40 |
Pages: |
16258-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sivakumar V |
Year: |
2003 |
Journal: |
J Exp Med |
Title: |
Differential requirement for Rel/nuclear factor kappa B family members in natural killer T cell development. |
Volume: |
197 |
Issue: |
12 |
Pages: |
1613-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yilmaz ZB |
Year: |
2003 |
Journal: |
EMBO J |
Title: |
RelB is required for Peyer's patch development: differential regulation of p52-RelB by lymphotoxin and TNF. |
Volume: |
22 |
Issue: |
1 |
Pages: |
121-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerth AJ |
Year: |
2004 |
Journal: |
Gastroenterology |
Title: |
An innate cell-mediated, murine ulcerative colitis-like syndrome in the absence of nuclear factor of activated T cells. |
Volume: |
126 |
Issue: |
4 |
Pages: |
1115-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rodriguez-Galán MC |
Year: |
2005 |
Journal: |
J Immunol |
Title: |
Synergistic effect of IL-2, IL-12, and IL-18 on thymocyte apoptosis and Th1/Th2 cytokine expression. |
Volume: |
174 |
Issue: |
5 |
Pages: |
2796-804 |
|
•
•
•
•
•
|
Publication |
First Author: |
Diamanti MA |
Year: |
2017 |
Journal: |
J Exp Med |
Title: |
IKKα controls ATG16L1 degradation to prevent ER stress during inflammation. |
Volume: |
214 |
Issue: |
2 |
Pages: |
423-437 |
|
•
•
•
•
•
|
Publication |
First Author: |
Göktuna SI |
Year: |
2014 |
Journal: |
Cell Rep |
Title: |
IKKα promotes intestinal tumorigenesis by limiting recruitment of M1-like polarized myeloid cells. |
Volume: |
7 |
Issue: |
6 |
Pages: |
1914-25 |
|
•
•
•
•
•
|
Publication |
First Author: |
Le Bon A |
Year: |
2006 |
Journal: |
Eur J Immunol |
Title: |
A role for the transcription factor RelB in IFN-alpha production and in IFN-alpha-stimulated cross-priming. |
Volume: |
36 |
Issue: |
8 |
Pages: |
2085-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jenkinson SR |
Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
TRAF3 enforces the requirement for T cell cross-talk in thymic medullary epithelial development. |
Volume: |
110 |
Issue: |
52 |
Pages: |
21107-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mamidi R |
Year: |
2014 |
Journal: |
Front Physiol |
Title: |
Length-dependent changes in contractile dynamics are blunted due to cardiac myosin binding protein-C ablation. |
Volume: |
5 |
|
Pages: |
461 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mamidi R |
Year: |
2016 |
Journal: |
Front Physiol |
Title: |
Cardiac Myosin Binding Protein-C Phosphorylation Modulates Myofilament Length-Dependent Activation. |
Volume: |
7 |
|
Pages: |
38 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
Toll proteins or Toll-like receptors (TLRs) and the interleukin-1 receptor (IL-1R) superfamily areboth involved in innate antibacterial and antifungalimmunity in insects as well as in mammals. These receptors share a conserved cytoplasmic domain of approximately 200 amino acids, known as the Toll/IL-1R homologous region (TIR). The similarity between TLRs and IL-1Rs is not restricted to sequence homology since these proteins also share a similar signalling pathway. They both induce the activation of a Rel type transcription factor via an adaptor protein and a protein kinase []. Interestingly, MyD88, a cytoplasmic adaptor protein found in mammals, contains a TIR domain associated to a DEATH domain [, , ]. Besides the mammalian and Drosophila proteins, a TIR domain is also found in a number of plant cytoplasmic proteins implicated in host defense [].Site directed mutagenesis and deletion analysis have shown that the TIR domain is essential for Toll and IL-1R activities. Sequence analysis have revealed the presence of three highly conserved regions among the different members of the family: box 1 (FDAFISY), box 2 (GYKLC-RD-PG), and box 3 (a conserved W surrounded by basic residues). It has been proposed that boxes 1 and 2 are involved in the binding of proteins involved in signalling, whereas box 3 is primarily involved in directing localization of receptor, perhaps through interactions with cytoskeletal element [].Resolution of the crystal structures of the TIR domains of human Toll-like receptors 1 and 2 has shown that they contain a central five-stranded parallel β-sheet that is surrounded by a total of five helices on both sides, with connecting loop structures []. The loop regions appear to play an important role in mediating the specificity of protein-proteininteractions [, ]. |
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•
•
•
•
•
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Publication |
First Author: |
Man K |
Year: |
2017 |
Journal: |
Immunity |
Title: |
Transcription Factor IRF4 Promotes CD8+ T Cell Exhaustion and Limits the Development of Memory-like T Cells during Chronic Infection. |
Volume: |
47 |
Issue: |
6 |
Pages: |
1129-1141.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gray DH |
Year: |
2006 |
Journal: |
Blood |
Title: |
Developmental kinetics, turnover, and stimulatory capacity of thymic epithelial cells. |
Volume: |
108 |
Issue: |
12 |
Pages: |
3777-85 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chappaz S |
Year: |
2021 |
Journal: |
Cell Rep |
Title: |
Homeostatic apoptosis prevents competition-induced atrophy in follicular B cells. |
Volume: |
36 |
Issue: |
3 |
Pages: |
109430 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hou Y |
Year: |
2018 |
Journal: |
Immunity |
Title: |
Non-canonical NF-κB Antagonizes STING Sensor-Mediated DNA Sensing in Radiotherapy. |
Volume: |
49 |
Issue: |
3 |
Pages: |
490-503.e4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vaeth M |
Year: |
2017 |
Journal: |
Immunity |
Title: |
Store-Operated Ca2+ Entry Controls Clonal Expansion of T Cells through Metabolic Reprogramming. |
Volume: |
47 |
Issue: |
4 |
Pages: |
664-679.e6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pereira RM |
Year: |
2014 |
Journal: |
Nat Commun |
Title: |
Jarid2 is induced by TCR signalling and controls iNKT cell maturation. |
Volume: |
5 |
|
Pages: |
4540 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ripen AM |
Year: |
2011 |
Journal: |
Eur J Immunol |
Title: |
Ontogeny of thymic cortical epithelial cells expressing the thymoproteasome subunit β5t. |
Volume: |
41 |
Issue: |
5 |
Pages: |
1278-87 |
|
•
•
•
•
•
|
Publication |
First Author: |
Briseño CG |
Year: |
2017 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Deficiency of transcription factor RelB perturbs myeloid and DC development by hematopoietic-extrinsic mechanisms. |
Volume: |
114 |
Issue: |
15 |
Pages: |
3957-3962 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang H |
Year: |
2014 |
Journal: |
J Clin Invest |
Title: |
NOTCH inhibits osteoblast formation in inflammatory arthritis via noncanonical NF-κB. |
Volume: |
124 |
Issue: |
7 |
Pages: |
3200-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Andreas N |
Year: |
2018 |
Journal: |
Eur J Immunol |
Title: |
A new RelB-dependent CD117+ CD172a+ murine DC subset preferentially induces Th2 differentiation and supports airway hyperresponses in vivo. |
Volume: |
48 |
Issue: |
6 |
Pages: |
923-936 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lee HH |
Year: |
2019 |
Journal: |
Nat Commun |
Title: |
TonEBP/NFAT5 promotes obesity and insulin resistance by epigenetic suppression of white adipose tissue beiging. |
Volume: |
10 |
Issue: |
1 |
Pages: |
3536 |
|
•
•
•
•
•
|
Publication |
First Author: |
Otero JE |
Year: |
2010 |
Journal: |
J Bone Miner Res |
Title: |
IKKbeta activation is sufficient for RANK-independent osteoclast differentiation and osteolysis. |
Volume: |
25 |
Issue: |
6 |
Pages: |
1282-94 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huang T |
Year: |
2018 |
Journal: |
J Exp Med |
Title: |
CRL4DCAF2 negatively regulates IL-23 production in dendritic cells and limits the development of psoriasis. |
Volume: |
215 |
Issue: |
8 |
Pages: |
1999-2017 |
|
•
•
•
•
•
|
Publication |
First Author: |
Essuman K |
Year: |
2018 |
Journal: |
Curr Biol |
Title: |
TIR Domain Proteins Are an Ancient Family of NAD+-Consuming Enzymes. |
Volume: |
28 |
Issue: |
3 |
Pages: |
421-430.e4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Loring HS |
Year: |
2021 |
Journal: |
Elife |
Title: |
A phase transition enhances the catalytic activity of SARM1, an NAD+ glycohydrolase involved in neurodegeneration. |
Volume: |
10 |
|
|
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the Toll/interleukin-1 receptor (TIR) domain, which is the conserved cytoplasmic domain of approximately 200 amino acids, found in Toll-like receptors (TLRs) and their adaptors. Proteins containing this domain can also be found in plants, where they mediate disease resistance [], and in bacteria, where they have been associated with virulence. Interestingly, the TIR domains from proteins present in all three major domains of life have been shown to cleave nicotinamide adenine dinucleotide (NAD+). In plants, TIR domains require self-association interfaces and a putative catalytic glutamic acid that is conserved in both bacterial TIR NAD+-cleaving enzymes (NADases) and the mammalian SARM1 (sterile alpha and TIR motif containing 1) NADase for cell death induction and NAD+ cleavage activity [, ]. It has been suggested that the primordial function of the TIR domain is the enzymatic cleavage of NAD+ and that the scaffolding function, which is best characterised in mammalian TIR domains involved in innate immunity, may be a more recent evolutionary adaptation [].Toll proteins or Toll-like receptors (TLRs) and the interleukin-1 receptor (IL-1R) superfamily are both involved in innate antibacterial and antifungalimmunity in insects as well as in mammals. These receptors share a conserved cytoplasmic domain of approximately 200 amino acids, known as the Toll/IL-1R homologous region (TIR). The similarity between TLRs and IL-1Rs is not restricted to sequence homology since these proteins also share a similar signalling pathway. They both induce the activation of a Rel type transcription factor via an adaptor protein and a protein kinase []. Interestingly, MyD88, a cytoplasmic adaptor protein found in mammals, contains a TIR domain associated to a DEATH domain [, , ]. Besides the mammalian and Drosophila proteins, a TIR domain is also found in a number of plant cytoplasmic proteins implicated in host defense [].Site directed mutagenesis and deletion analysis have shown that the TIR domain is essential for Toll and IL-1R activities. Sequence analysis have revealed the presence of three highly conserved regions among the different members of the family: box 1 (FDAFISY), box 2 (GYKLC-RD-PG), and box 3 (a conserved W surrounded by basic residues). It has been proposed that boxes 1 and 2 are involved in the binding of proteins involved in signalling, whereas box 3 is primarily involved in directing localization of receptor, perhaps through interactions with cytoskeletal element [].Resolution of the crystal structures of the TIR domains of human Toll-like receptors 1 and 2 has shown that they contain a central five-stranded parallel β-sheet that is surrounded by a total of five helices on both sides, with connecting loop structures []. The loop regions appear to play an important role in mediating the specificity of protein-protein interactions [, ]. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
783
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
811
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
732
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Takeuchi O |
Year: |
1999 |
Journal: |
Gene |
Title: |
TLR6: A novel member of an expanding toll-like receptor family. |
Volume: |
231 |
Issue: |
1-2 |
Pages: |
59-65 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
232
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
241
|
Fragment?: |
false |
|
•
•
•
•
•
|