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Search results 201 to 289 out of 289 for Brdt

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Hits by Strain

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Type Details Score
GXD Expression
GXD Expression
   
Probe: MGI:3506092
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Female
Emaps: EMAPS:2852723
Stage: TS23
Assay Id: MGI:5539158
Age: embryonic day 15.5
Image: GUDMAP:5354
Specimen Label: GUDMAP:5354
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506092
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2874723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539158
Age: embryonic day 15.5
Image: GUDMAP:5354
Specimen Label: GUDMAP:5354
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1756322
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1668822
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3506092
Assay Type: RNA in situ
Annotation Date: 2005-01-03
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1757721
Stage: TS21
Assay Id: MGI:3512416
Age: embryonic day 13.5
Image: 1
Specimen Label: 1
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
Probe: MGI:4882620
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4945870
Age: embryonic day 15.5
Image: g01874 E15.5
Note: Expression was region specific and scattered.
Specimen Label: g01874 E15.5
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:4882620
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1757728
Pattern: Scattered
Stage: TS28
Assay Id: MGI:4945870
Age: postnatal day 7
Image: g01874 P7
Specimen Label: g01874 P7
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:4882620
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1757728
Pattern: Scattered
Stage: TS28
Assay Id: MGI:4945870
Age: postnatal day 42
Image: g01874 Adult
Specimen Label: g01874 Adult
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
     
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1757722
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1757522
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3506092
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Female
Emaps: EMAPS:2850023
Stage: TS23
Assay Id: MGI:5539158
Age: embryonic day 15.5
Image: GUDMAP:5354
Specimen Label: GUDMAP:5354
Detected: false
Specimen Num: 1
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•
GXD Expression
GXD Expression
     
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1738322
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1802422
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3506092
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Female
Emaps: EMAPS:1796223
Stage: TS23
Assay Id: MGI:5539158
Age: embryonic day 15.5
Image: GUDMAP:5354
Specimen Label: GUDMAP:5354
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1768022
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Note: Expression was not detected in the skull (base and vault).
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:4844899
Assay Type: RNA in situ
Annotation Date: 2010-12-22
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1638815
Pattern: Not Specified
Stage: TS15
Assay Id: MGI:4848708
Age: embryonic day 9.5
Note: Staining is present in the maxillary process.
Specimen Label: Table S4 - E9.5
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:4437008
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:2672022
Stage: TS22
Assay Id: MGI:5422719
Age: embryonic day 14.5
Note: Expression was not detected in whisker follicle.
Specimen Label: MH3062; Specimen C4191
Detected: false
Specimen Num: 1
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Publication
- | J:71325
   
First Author: Shang E
Year: 2001
Journal: GenBank Submission
Title: Mus musculus bromodomain-containing female sterile homeotic-like protein (Fsrg3) mRNA, complete cds
Pages: AF358660
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HT Experiment
GSE72786 | Brdt KO mice: Wild-type vs. Mutant
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: GEO
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Publication
20593818 | J:201465
First Author: Bezstarosti K
Year: 2010
Journal: J Proteome Res
Title: Differential proteomics based on 18O labeling to determine the cyclin dependent kinase 9 interactome.
Volume: 9
Issue: 9
Pages: 4464-75
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Publication
21057502 | J:166675
First Author: Borgel J
Year: 2010
Journal: Nat Genet
Title: Targets and dynamics of promoter DNA methylation during early mouse development.
Volume: 42
Issue: 12
Pages: 1093-100
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Publication
32726616 | J:298823
First Author: Kim CR
Year: 2020
Journal: Cell Rep
Title: PHF7 Modulates BRDT Stability and Histone-to-Protamine Exchange during Spermiogenesis.
Volume: 32
Issue: 4
Pages: 107950
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Publication
27649575 | J:262221
First Author: Nakajima R
Year: 2016
Journal: PLoS One
Title: JMJD1C Exhibits Multiple Functions in Epigenetic Regulation during Spermatogenesis.
Volume: 11
Issue: 9
Pages: e0163466
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Publication
37973188 | J:342617
 
First Author: Dali O
Year: 2024
Journal: Life Sci Alliance
Title: Transgenerational epigenetic effects imposed by neonicotinoid thiacloprid exposure.
Volume: 7
Issue: 2
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Publication
- | J:165965
     
First Author: Mouse Genome Informatics and the Europhenome Mouse Phenotyping Resource
Year: 2010
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from Europhenome
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Publication
- | J:175295
     
First Author: Mouse Genome Informatics and the Wellcome Trust Sanger Institute Mouse Genetics Project (MGP)
Year: 2011
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the Wellcome Trust Sanger Institute (WTSI) Mouse Resources Portal
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Publication
30973865 | J:274872
First Author: Ingham NJ
Year: 2019
Journal: PLoS Biol
Title: Mouse screen reveals multiple new genes underlying mouse and human hearing loss.
Volume: 17
Issue: 4
Pages: e3000194
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Publication
20412781 | J:140465
First Author: Guo G
Year: 2010
Journal: Dev Cell
Title: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Volume: 18
Issue: 4
Pages: 675-85
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Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
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Publication
- | J:81858
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: Data Curation Using Mouse Genome Assembly
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Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
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Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:155856
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Rat to Mouse ISO GO annotation transfer
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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HT Experiment
E-GEOD-39909 | Bromodomain-dependent stage-specific male genome programming by Brdt [Illumina BeadArray]
Series Id: GSE39909
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE136752 | PHF7 Modulates BRDT Stability and Histone-to-Protamine Exchange during Spermiogenesis
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
22901802 | -
First Author: Matzuk MM
Year: 2012
Journal: Cell
Title: Small-molecule inhibition of BRDT for male contraception.
Volume: 150
Issue: 4
Pages: 673-84
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Publication
15261828 | -
First Author: Shang E
Year: 2004
Journal: Gene Expr Patterns
Title: Identification of unique, differentiation stage-specific patterns of expression of the bromodomain-containing genes Brd2, Brd3, Brd4, and Brdt in the mouse testis.
Volume: 4
Issue: 5
Pages: 513-9
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DO Term
DOID:0070163 | spermatogenic failure 21
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HT Experiment
E-GEOD-33132 | Expression data from purified control and Brdt-delta-BD1 round spermatids
Series Id: GSE33132
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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Protein Domain
IPR043509 | Bromo_Brdt_II
Type: Domain
Description: Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins. The BET proteins contain two bromodomains and a region of homology in the C-terminal region, designated the extra terminal (ET) motif. The first bromodomain in Brdt has been shown to be essential for male germ cell differentiation []. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [].This entry represents the second bromodomain found in Brdt and related proteins.
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Protein Domain
IPR043508 | Bromo_Brdt_I
Type: Domain
Description: Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins. The BET proteins contain two bromodomains and a region of homology in the C-terminal region, designated the extra terminal (ET) motif. The first bromodomain in Brdt has been shown to be essential for male germ cell differentiation []. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [].This entry represents the first bromodomain found in Brdt and related proteins.
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Protein
B0V2V6
Organism: Mus musculus/domesticus
Length: 557  
Fragment?: true
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Protein
I7HPW1
Organism: Mus musculus/domesticus
Length: 473  
Fragment?: true
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Protein
Q3SYK2
Organism: Mus musculus/domesticus
Length: 557  
Fragment?: true
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Protein
Q05DR7
Organism: Mus musculus/domesticus
Length: 501  
Fragment?: true
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Protein
A0A494BAK1
Organism: Mus musculus/domesticus
Length: 572  
Fragment?: true
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Protein
Q63ZX2
Organism: Mus musculus/domesticus
Length: 582  
Fragment?: true
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Protein
Q3U3Z2
Organism: Mus musculus/domesticus
Length: 545  
Fragment?: true
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Publication
11911891 | -
First Author: Zeng L
Year: 2002
Journal: FEBS Lett
Title: Bromodomain: an acetyl-lysine binding domain.
Volume: 513
Issue: 1
Pages: 124-8
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Publication
27105113 | J:243518
First Author: Goudarzi A
Year: 2016
Journal: Mol Cell
Title: Dynamic Competing Histone H4 K5K8 Acetylation and Butyrylation Are Hallmarks of Highly Active Gene Promoters.
Volume: 62
Issue: 2
Pages: 169-80
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Protein
Q53TY6
Organism: Mus musculus/domesticus
Length: 387  
Fragment?: false
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Protein
D6RGP2
Organism: Mus musculus/domesticus
Length: 146  
Fragment?: false
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Protein
Q9ESU6
Organism: Mus musculus/domesticus
Length: 1400  
Fragment?: false
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Protein
Q7JJ13
Organism: Mus musculus/domesticus
Length: 798  
Fragment?: false
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Protein
Q8K2F0
Organism: Mus musculus/domesticus
Length: 726  
Fragment?: false
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Protein
Q91Y44
Organism: Mus musculus/domesticus
Length: 956  
Fragment?: false
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Protein
A2AKA9
Organism: Mus musculus/domesticus
Length: 682  
Fragment?: true
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Protein
Q5CCJ9
Organism: Mus musculus/domesticus
Length: 743  
Fragment?: false
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Protein
Q4G5Y4
Organism: Mus musculus/domesticus
Length: 726  
Fragment?: false
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Protein
B2RS09
Organism: Mus musculus/domesticus
Length: 798  
Fragment?: false
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Protein
B2RSE4
Organism: Mus musculus/domesticus
Length: 723  
Fragment?: false
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Protein
Q3TUI3
Organism: Mus musculus/domesticus
Length: 726  
Fragment?: false
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Protein
Q3UH70
Organism: Mus musculus/domesticus
Length: 1401  
Fragment?: false
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Publication
32285106 | J:293898
First Author: Li F
Year: 2020
Journal: Biol Reprod
Title: Metabolism of JQ1, an inhibitor of bromodomain and extra terminal bromodomain proteins, in human and mouse liver microsomes†.
Volume: 103
Issue: 2
Pages: 427-436
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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