Type |
Details |
Score |
Publication |
First Author: |
McCoy EL |
Year: |
2009 |
Journal: |
J Clin Invest |
Title: |
Six1 expands the mouse mammary epithelial stem/progenitor cell pool and induces mammary tumors that undergo epithelial-mesenchymal transition. |
Volume: |
119 |
Issue: |
9 |
Pages: |
2663-77 |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE50023 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Adrados I |
Year: |
2016 |
Journal: |
Oncogene |
Title: |
The homeoprotein SIX1 controls cellular senescence through the regulation of p16INK4A and differentiation-related genes. |
Volume: |
35 |
Issue: |
27 |
Pages: |
3485-94 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6504940 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2021-02-04 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1640617 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:6504949 |
Age: |
embryonic day 10.5 |
Image: |
4A |
Note: |
Co-expression with Six1 in nuclei of myogenic progenitor cells. |
Specimen Label: |
4A |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4833962 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-10-06 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1606912 |
Pattern: |
Regionally restricted |
Stage: |
TS12 |
Assay Id: |
MGI:4833966 |
Age: |
embryonic day 8.0 |
|
Note: |
Expression is present in the anterior neural ridge. There was overlap with Six1 expression. |
Specimen Label: |
Not shown |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Farabaugh SM |
Year: |
2012 |
Journal: |
Oncogene |
Title: |
Eya2 is required to mediate the pro-metastatic functions of Six1 via the induction of TGF-β signaling, epithelial-mesenchymal transition, and cancer stem cell properties. |
Volume: |
31 |
Issue: |
5 |
Pages: |
552-62 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sato S |
Year: |
2002 |
Journal: |
Hum Mol Genet |
Title: |
Identification of transcriptional targets for Six5: implication for the pathogenesis of myotonic dystrophy type 1. |
Volume: |
11 |
Issue: |
9 |
Pages: |
1045-58 |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
EYA1 and SIX1 drive the neuronal developmental program in cooperation with the SWI/SNF chromatin-remodeling complex and SOX2 in the mammalian inner ear. |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
EYA transcriptional coactivator and phosphatase 1; targeted mutation 4, Pin-Xian Xu |
Allele Type: |
Targeted |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Shigeru Sato |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
Baseline |
Source: |
GEO |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion x4, Shigeru Sato |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE30076 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Allele |
Name: |
sine oculis-related homeobox 1; targeted mutation 1, Xue Li |
Allele Type: |
Targeted |
Attribute String: |
Recombinase |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Recombinase |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Eya1/Eya1<+> |
Background: |
Not Specified |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion x4, Shigeru Sato |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Six1/Six1<+> |
Background: |
involves: 129 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE34274 |
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Members of the eye absent (EYA) family were originally characterised in fly eye development. EYA proteins are both transcriptional activators and tyrosine phosphatases [, ], and have been shown to dephosphorylate H2AX, promoting repair and cell survival in the response to DNA damage []. EYA proteins (EYA1-4) are normally expressed early in development [, ]. Their phosphatase activity regulates Six1-Dach-Eya transcriptional effects in precursor cell proliferation and survival in mammalian organogenesis [].EYA2 plays an important role in hypaxial muscle development together with Six1 and Dach2; in this it is functionally redundant with EYA1 []. EYA2 is a necessary co-factor for many of the metastasis promoting functions of Six1 []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Patrick AN |
Year: |
2013 |
Journal: |
Nat Struct Mol Biol |
Title: |
Structure-function analyses of the human SIX1-EYA2 complex reveal insights into metastasis and BOR syndrome. |
Volume: |
20 |
Issue: |
4 |
Pages: |
447-53 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
The SD domain is found N-terminal to the homeobox domain in the protein SIX1. As a transcription factor, SIX1 lacks intrinsic activation domains and thus needs to bind to the EYA family of co-factors in order to mediate transcriptional activation. The SD domain is necessary for this protein-protein interaction, binding to the C-terminal region of EYA (Eyes absent homologue proteins) []. |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion, Heide L Ford |
Allele Type: |
Transgenic |
Attribute String: |
Humanized sequence, Inducible, Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 2, Kiyoshi Kawakami |
Allele Type: |
Transgenic |
Attribute String: |
Recombinase |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Eya1/Eya1<+> Six2/Six2 |
Background: |
Not Specified |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Tg(Six1-cre)1Kwk/? |
Background: |
involves: 129X1/SvJ |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Members of the eye absent (EYA) family were originally characterised in fly eye development. EYA proteins are both transcriptional activators and tyrosine phosphatases [, ], and have been shown to dephosphorylate H2AX, promoting repair and cell survival in the response to DNA damage []. EYA proteins (EYA1-4) are normally expressed early in development [, ]. Their phosphatase activity regulates Six1-Dach-Eya transcriptional effects in precursor cell proliferation and survival in mammalian organogenesis [].EYA3 forms a complex with Six1 and Ski that regulates muscle terminal differentiation []. |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Fgf8/Fgf8<+> Six1/Six1<+> |
Background: |
involves: 129 * 129P2/OlaHsd * C57BL/6 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Ctnnb1/Ctnnb1<+> Six1/Six1<+> |
Background: |
involves: 129 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Borsani G |
Year: |
1999 |
Journal: |
Hum Mol Genet |
Title: |
EYA4, a novel vertebrate gene related to Drosophila eyes absent. |
Volume: |
8 |
Issue: |
1 |
Pages: |
11-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Abdelhak S |
Year: |
1997 |
Journal: |
Nat Genet |
Title: |
A human homologue of the Drosophila eyes absent gene underlies branchio-oto-renal (BOR) syndrome and identifies a novel gene family. |
Volume: |
15 |
Issue: |
2 |
Pages: |
157-64 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cook PJ |
Year: |
2009 |
Journal: |
Nature |
Title: |
Tyrosine dephosphorylation of H2AX modulates apoptosis and survival decisions. |
Volume: |
458 |
Issue: |
7238 |
Pages: |
591-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jemc J |
Year: |
2007 |
Journal: |
Annu Rev Biochem |
Title: |
The eyes absent family of phosphotyrosine phosphatases: properties and roles in developmental regulation of transcription. |
Volume: |
76 |
|
Pages: |
513-38 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
286
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
302
|
Fragment?: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Six1/Six1<+> |
Background: |
involves: 129/Sv * 129S4/SvJaeSor |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Eisner A |
Year: |
2015 |
Journal: |
Dev Cell |
Title: |
The Eya1 phosphatase promotes Shh signaling during hindbrain development and oncogenesis. |
Volume: |
33 |
Issue: |
1 |
Pages: |
22-35 |
|
•
•
•
•
•
|
Publication |
First Author: |
L'Honoré A |
Year: |
2007 |
Journal: |
Dev Biol |
Title: |
Sequential expression and redundancy of Pitx2 and Pitx3 genes during muscle development. |
Volume: |
307 |
Issue: |
2 |
Pages: |
421-33 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang H |
Year: |
2018 |
Journal: |
Int J Biol Sci |
Title: |
Disruption of Gen1 Causes Congenital Anomalies of the Kidney and Urinary Tract in Mice. |
Volume: |
14 |
Issue: |
1 |
Pages: |
10-20 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Tg(Six1-cre)2Kwk/? |
Background: |
involves: 129S4/SvJaeSor * C57BL/6J * DBA/2J |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
44
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Tootle TL |
Year: |
2003 |
Journal: |
Nature |
Title: |
The transcription factor Eyes absent is a protein tyrosine phosphatase. |
Volume: |
426 |
Issue: |
6964 |
Pages: |
299-302 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li C |
Year: |
2020 |
Journal: |
Genesis |
Title: |
Generation and characterization of Six2 conditional mice. |
Volume: |
58 |
Issue: |
7 |
Pages: |
e23365 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wilkerson BA |
Year: |
2019 |
Journal: |
Sci Rep |
Title: |
Open chromatin dynamics in prosensory cells of the embryonic mouse cochlea. |
Volume: |
9 |
Issue: |
1 |
Pages: |
9060 |
|
•
•
•
•
•
|
Publication |
First Author: |
Masumoto KH |
Year: |
2010 |
Journal: |
Curr Biol |
Title: |
Acute induction of Eya3 by late-night light stimulation triggers TSHβ expression in photoperiodism. |
Volume: |
20 |
Issue: |
24 |
Pages: |
2199-206 |
|
•
•
•
•
•
|
Publication |
First Author: |
Petropoulos H |
Year: |
2002 |
Journal: |
J Biol Chem |
Title: |
Beta-catenin is essential and sufficient for skeletal myogenesis in P19 cells. |
Volume: |
277 |
Issue: |
18 |
Pages: |
15393-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ono K |
Year: |
2014 |
Journal: |
PLoS Genet |
Title: |
FGFR1-Frs2/3 signalling maintains sensory progenitors during inner ear hair cell formation. |
Volume: |
10 |
Issue: |
1 |
Pages: |
e1004118 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schäfer K |
Year: |
1999 |
Journal: |
Nat Genet |
Title: |
Early specification of limb muscle precursor cells by the homeobox gene Lbx1h. |
Volume: |
23 |
Issue: |
2 |
Pages: |
213-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yajima H |
Year: |
2016 |
Journal: |
Dev Growth Differ |
Title: |
Low Six4 and Six5 gene dosage improves dystrophic phenotype and prolongs life span of mdx mice. |
Volume: |
58 |
Issue: |
6 |
Pages: |
546-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jefferson WN |
Year: |
2013 |
Journal: |
Mol Endocrinol |
Title: |
Persistently altered epigenetic marks in the mouse uterus after neonatal estrogen exposure. |
Volume: |
27 |
Issue: |
10 |
Pages: |
1666-77 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
532
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
450
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
532
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
502
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
614
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Paper W |
Year: |
2008 |
Journal: |
Exp Eye Res |
Title: |
Elevated amounts of myocilin in the aqueous humor of transgenic mice cause significant changes in ocular gene expression. |
Volume: |
87 |
Issue: |
3 |
Pages: |
257-67 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
333
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
246
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
246
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
347
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
510
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
296
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
775
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
719
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
526
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
518
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|