Type |
Details |
Score |
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4417728 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-01-15 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:3564522 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:3826100 |
Age: |
embryonic day 14.5 |
Image: |
Additional file 4 Pitpnb |
|
Specimen Label: |
Additional file 4 Pitpnb |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7520246 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2023-08-25 |
Strength: |
Trace |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284220 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:7520513 |
Age: |
embryonic day 12.5 |
|
Note: |
Expression strongly diminished compared to control. |
Specimen Label: |
1B PitpnB KO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
Publication |
First Author: |
Schenning M |
Year: |
2007 |
Journal: |
Biochim Biophys Acta |
Title: |
The anti-apoptotic MAP kinase pathway is inhibited in NIH3T3 fibroblasts with increased expression of phosphatidylinositol transfer protein beta. |
Volume: |
1773 |
Issue: |
11 |
Pages: |
1664-71 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7520246 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2023-08-25 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284220 |
Pattern: |
Widespread |
Stage: |
TS20 |
Assay Id: |
MGI:7520513 |
Age: |
embryonic day 12.5 |
|
Note: |
Robust expression in cytoplasm of all neocortical cells. |
Specimen Label: |
1B Control |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7547044 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2023-11-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1862825 |
Pattern: |
Regionally restricted |
Stage: |
TS25 |
Assay Id: |
MGI:7547103 |
Age: |
embryonic day 17.5 |
|
Note: |
Expressed in valve endothelial and interstitial cells within the mitral leaflets. |
Specimen Label: |
S6 E17.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7547044 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2023-11-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1787121 |
Pattern: |
Regionally restricted |
Stage: |
TS21 |
Assay Id: |
MGI:7547103 |
Age: |
embryonic day 13.5 |
|
Note: |
Expressed in valve endothelial and interstitial cells within the mitral leaflets. |
Specimen Label: |
S6 E13.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7547044 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2023-11-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1787128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:7547103 |
Age: |
postnatal month 9 |
|
Note: |
Expressed in valve endothelial and interstitial cells within the mitral leaflets. |
Specimen Label: |
S6 9 months |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4417728 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827221 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_012385_11 |
|
Specimen Label: |
euxassay_012385_11 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4417728 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827221 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_012385_12 |
|
Specimen Label: |
euxassay_012385_12 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4417728 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827221 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_012385_13 |
|
Specimen Label: |
euxassay_012385_13 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4417728 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827221 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_012385_14 |
|
Specimen Label: |
euxassay_012385_14 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7547044 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2023-11-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1658925 |
Pattern: |
Not Specified |
Stage: |
TS25 |
Assay Id: |
MGI:7547103 |
Age: |
embryonic day 17.5 |
|
|
Specimen Label: |
S6 E17.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7547044 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2023-11-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1916025 |
Pattern: |
Regionally restricted |
Stage: |
TS25 |
Assay Id: |
MGI:7547103 |
Age: |
embryonic day 17.5 |
|
Note: |
Expressed in coronary endothelium. |
Specimen Label: |
S6 E17.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Geijtenbeek TBH |
Year: |
1996 |
Journal: |
GenBank Submission |
Title: |
Mus musculus phosphatidylinositol transfer protein beta isoform mRNA, complete cds |
|
|
Pages: |
U46934 |
|
•
•
•
•
•
|
Publication |
First Author: |
de Vries KJ |
Year: |
1995 |
Journal: |
Biochem J |
Title: |
An isoform of the phosphatidylinositol-transfer protein transfers sphingomyelin and is associated with the Golgi system. |
Volume: |
310 ( Pt 2) |
|
Pages: |
643-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Alb JG Jr |
Year: |
2002 |
Journal: |
Mol Biol Cell |
Title: |
Genetic ablation of phosphatidylinositol transfer protein function in murine embryonic stem cells. |
Volume: |
13 |
Issue: |
3 |
Pages: |
739-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Phillips SE |
Year: |
2006 |
Journal: |
Mol Biol Cell |
Title: |
Specific and nonspecific membrane-binding determinants cooperate in targeting phosphatidylinositol transfer protein beta-isoform to the mammalian trans-Golgi network. |
Volume: |
17 |
Issue: |
6 |
Pages: |
2498-512 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cockcroft S |
Year: |
2007 |
Journal: |
Biochim Biophys Acta |
Title: |
Biochemical and biological functions of class I phosphatidylinositol transfer proteins. |
Volume: |
1771 |
Issue: |
6 |
Pages: |
677-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schenning M |
Year: |
2008 |
Journal: |
Biochim Biophys Acta |
Title: |
The anti-apoptotic activity associated with phosphatidylinositol transfer protein alpha activates the MAPK and Akt/PKB pathway. |
Volume: |
1783 |
Issue: |
10 |
Pages: |
1700-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Capitano M |
Year: |
2018 |
Journal: |
Blood |
Title: |
Phosphatidylinositol transfer proteins regulate megakaryocyte TGF-β1 secretion and hematopoiesis in mice. |
Volume: |
132 |
Issue: |
10 |
Pages: |
1027-1038 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yoder MD |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Structure of a multifunctional protein. Mammalian phosphatidylinositol transfer protein complexed with phosphatidylcholine. |
Volume: |
276 |
Issue: |
12 |
Pages: |
9246-52 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dina C |
Year: |
2015 |
Journal: |
Nat Genet |
Title: |
Genetic association analyses highlight biological pathways underlying mitral valve prolapse. |
Volume: |
47 |
Issue: |
10 |
Pages: |
1206-11 |
|
•
•
•
•
•
|
Publication |
First Author: |
Inoue S |
Year: |
2000 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Growth suppression of Escherichia coli by induction of expression of mammalian genes with transmembrane or ATPase domains. |
Volume: |
268 |
Issue: |
2 |
Pages: |
553-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xie Z |
Year: |
2018 |
Journal: |
Dev Cell |
Title: |
A Golgi Lipid Signaling Pathway Controls Apical Golgi Distribution and Cell Polarity during Neurogenesis. |
Volume: |
44 |
Issue: |
6 |
Pages: |
725-740.e4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xie Z |
Year: |
2022 |
Journal: |
Cell Rep |
Title: |
Phosphatidylinositol transfer protein/planar cell polarity axis regulates neocortical morphogenesis by supporting interkinetic nuclear migration. |
Volume: |
39 |
Issue: |
9 |
Pages: |
110869 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li Q |
Year: |
2014 |
Journal: |
Elife |
Title: |
The splicing regulator PTBP2 controls a program of embryonic splicing required for neuronal maturation. |
Volume: |
3 |
|
Pages: |
e01201 |
|
•
•
•
•
•
|
Publication |
First Author: |
Licatalosi DD |
Year: |
2012 |
Journal: |
Genes Dev |
Title: |
Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain. |
Volume: |
26 |
Issue: |
14 |
Pages: |
1626-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffman BG |
Year: |
2008 |
Journal: |
Genome Biol |
Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
Volume: |
9 |
Issue: |
6 |
Pages: |
R99 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
Pages: |
1737-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen GM |
Year: |
2008 |
Journal: |
Genome Res |
Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
Volume: |
18 |
Issue: |
10 |
Pages: |
1670-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
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|
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•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
272
|
Fragment?: |
false |
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Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
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Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
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