Type |
Details |
Score |
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
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Title: |
Human to Mouse ISO GO annotation transfer |
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•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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GXD Expression |
Probe: |
MGI:7328610 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328626 |
Age: |
postnatal day 0.5 |
Image: |
8 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328611 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328627 |
Age: |
postnatal day 0.5 |
Image: |
8 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328612 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328628 |
Age: |
postnatal day 0.5 |
Image: |
8 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328609 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328629 |
Age: |
postnatal |
Image: |
9 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328609 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328629 |
Age: |
postnatal |
Image: |
9 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5497006 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328630 |
Age: |
postnatal |
Image: |
9 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5497006 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328630 |
Age: |
postnatal |
Image: |
9 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328612 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328631 |
Age: |
postnatal |
Image: |
9 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328612 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328631 |
Age: |
postnatal |
Image: |
9 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328619 |
Assay Type: |
RT-PCR |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328634 |
Age: |
postnatal day 0.5 |
Image: |
S4 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328620 |
Assay Type: |
RT-PCR |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328635 |
Age: |
postnatal day 0.5 |
Image: |
S4 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6718432 |
Assay Type: |
RT-PCR |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328636 |
Age: |
postnatal day 0.5 |
Image: |
S4 |
|
Specimen Label: |
Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328608 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328623 |
Age: |
postnatal day 0.5 |
Image: |
6 |
|
Specimen Label: |
P0.5 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328609 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328624 |
Age: |
postnatal day 0.5 |
Image: |
6 |
|
Specimen Label: |
P0.5 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328608 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328623 |
Age: |
postnatal day 7 |
Image: |
6 |
|
Specimen Label: |
P7 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328608 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328623 |
Age: |
postnatal day 14 |
Image: |
6 |
|
Specimen Label: |
P14 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328609 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328624 |
Age: |
postnatal day 7 |
Image: |
6 |
|
Specimen Label: |
P7 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7328609 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328624 |
Age: |
postnatal day 14 |
Image: |
6 |
|
Specimen Label: |
P14 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5497006 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7328625 |
Age: |
postnatal day 0.5 |
Image: |
6 |
|
Specimen Label: |
P0.5 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5497006 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328625 |
Age: |
postnatal day 7 |
Image: |
6 |
|
Specimen Label: |
P7 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5497006 |
Assay Type: |
Western blot |
Annotation Date: |
2022-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1783828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7328625 |
Age: |
postnatal day 14 |
Image: |
6 |
|
Specimen Label: |
P14 Znhit1 cKO |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
77
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Mizuguchi G |
Year: |
2012 |
Journal: |
Methods Enzymol |
Title: |
Biochemical assay for histone H2A.Z replacement by the yeast SWR1 chromatin remodeling complex. |
Volume: |
512 |
|
Pages: |
275-91 |
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•
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•
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Protein Domain |
Type: |
Family |
Description: |
This entry includes Vps71 from yeasts and ZNHIT1 (also known as Hamlet or p18) from animals. The evolutionarily conserved histone variant H2A.Z antagonizes the spread of heterochromatin (mediated by Sir2 and Sir3), therefore acting as an anti-silencing factor. Vps71 is the nucleosome-binding component of the SWR1 complex, which replaces conventional histone H2A in nucleosomes with histone H2A.Z [, ]. ZNHIT1 is part of the SNF2-related CBP activator protein (SRCAP) complex, which is a Swr1-like complex that regulates H2A.Z deposition in cells []. |
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•
•
•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
154
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
153
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
158
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
147
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
147
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Mizuguchi G |
Year: |
2004 |
Journal: |
Science |
Title: |
ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. |
Volume: |
303 |
Issue: |
5656 |
Pages: |
343-8 |
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•
•
•
•
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