|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 901 to 975 out of 975 for Lfng

<< First    < Previous  |  Next >    Last >>
0.024s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
GXD Expression
GXD Expression
Probe: MGI:1332538
Assay Type: RNA in situ
Annotation Date: 1999-06-14
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1618913
Pattern: Regionally restricted
Stage: TS13
Assay Id: MGI:1337815
Age: embryonic day 8.5
Image: 3.E
Note: Expression domain overlaps with Lfng expression domain at the posterior edge of the anterior Lfng stripe, while more caudally they overlap entirely.
Specimen Label: 3.E
Detected: true
Specimen Num: 1
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng Rfng/Rfng
Background: involves: 129S1/SvImJ * C57BL/6J
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Jag2/Jag2 Lfng/Lfng
Background: involves: 129S1/Sv * C57BL/6J
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng<+>
Background: involves: 129 * C57BL/6J
Zygosity: ht
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng<+>
Background: involves: 129S7/SvEvBrd
Zygosity: ht
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Dll3/Dll3 Lfng/Lfng
Background: involves: 101/Rl * 129S7/SvEvBrd * C3H/Rl * C57BL/6 * FVB/J
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng<+>
Background: involves: 129 * 129S4/SvJaeSor
Zygosity: ht
Has Mutant Allele: true
•
•
•
•
•
Allele
Mesp2<tm15.1(Lfng)Ysa> | MGI:4454334
Name: mesoderm posterior 2; targeted mutation 15.1, Yumiko Saga
Allele Type: Targeted
Attribute String: Conditional ready, Inserted expressed sequence
•
•
•
•
•
Strain
MGI:4360330 | B6.Cg-Lfng<tm1Rjo> Mfng<tm1Cjg>
Attribute String: targeted mutation, mutant strain, congenic
•
•
•
•
•
Genotype
Genotype
Symbol: Jag2/Jag2 Lfng/Lfng<+>
Background: involves: 129S1/Sv * C57BL/6J
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng Ripply2/Ripply2
Background: involves: 129S7/SvEvBrd * C57BL/6 * CBA * ICR
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng Mfng/Mfng
Background: involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6J * FVB/NJ
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng Mfng/Mfng
Background: B6.Cg-Lfng Mfng
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng
Background: involves: 129 * C57BL/6J
Zygosity: ht
Has Mutant Allele: true
•
•
•
•
•
Allele
Tg(Lfng-Venus)#Olp | MGI:6458848
Name: transgene insertion, Olivier Pourquie
Allele Type: Transgenic
Attribute String: Reporter
•
•
•
•
•
Genotype
Genotype
Symbol: Mesp2/Mesp2
Background: Not Specified
Zygosity: hm
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Lfng/Lfng Mfng/Mfng Rfng/Rfng
Background: involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6J * FVB/NJ
Zygosity: cx
Has Mutant Allele: true
•
•
•
•
•
Allele
Tg(Lfng-LFNG)2Dihz | MGI:4420241
Name: transgene insertion 2, David Ish-Horowicz
Allele Type: Transgenic
Attribute String: Inserted expressed sequence
•
•
•
•
•
Allele
Tg(Lfng-EGFP)HM340Gsat | MGI:4847192
Name: transgene insertion HM340, GENSAT Project at Rockefeller University
Allele Type: Transgenic
Attribute String: Reporter
•
•
•
•
•
Allele
Tg(Lfng-LFNG)1Dihz | MGI:4420246
Name: transgene insertion 1, David Ish-Horowicz
Allele Type: Transgenic
Attribute String: Inserted expressed sequence
•
•
•
•
•
Allele
Tg(Lfng-cre/ERT2)1Mmsa | MGI:6120527
Name: transgene insertion 1, Mirjana Maletic-Savatic
Allele Type: Transgenic
Attribute String: Inducible, Recombinase
•
•
•
•
•
Allele
Tg(Lfng*-LFNG)2Dihz | MGI:4420245
Name: transgene insertion 2, David Ish-Horowicz
Allele Type: Transgenic
Attribute String: Inserted expressed sequence
•
•
•
•
•
HT Experiment
E-GEOD-15153 | Transcription profiling of mouse Dll3 mutant vs. wild-type 9.5 dpc somite-level tissue
Series Id: GSE15153
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
HT Experiment
E-GEOD-15152 | Transcription profiling of mouseDll3 mutant vs. wild-type 9.5 dpc presomitic mesoderm
Series Id: GSE15152
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
•
•
•
•
•
HT Experiment
GSE83356 | RNA-seq analysis of neonatal mouse cochlear supporting cells [NonTreated_JM]
Series Id: E-GEOD-83356
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
•
•
•
•
•
Strain
MGI:5003715 | STOCK Tg(Lfng-EGFP)HM340Gsat/Mmucd
Attribute String: mutant stock, transgenic
•
•
•
•
•
Publication
32116546 | J:339528
 
First Author: Hoa M
Year: 2020
Journal: Front Mol Neurosci
Title: Characterizing Adult Cochlear Supporting Cell Transcriptional Diversity Using Single-Cell RNA-Seq: Validation in the Adult Mouse and Translational Implications for the Adult Human Cochlea.
Volume: 13
Pages: 13
•
•
•
•
•
Publication
27918591 | J:247587
First Author: Maass JC
Year: 2016
Journal: PLoS One
Title: Transcriptomic Analysis of Mouse Cochlear Supporting Cell Maturation Reveals Large-Scale Changes in Notch Responsiveness Prior to the Onset of Hearing.
Volume: 11
Issue: 12
Pages: e0167286
•
•
•
•
•
Allele
Tg(Lfng-TagRFP/cre/ERT2)8Amc | MGI:5317216
Name: transgene insertion 8, Andrew P McMahon
Allele Type: Transgenic
Attribute String: Inducible, Recombinase, Reporter
•
•
•
•
•
Strain
MGI:5317287 | B6;D-Tg(Lfng-TagRFP/cre/ERT2)8Amc/J
Attribute String: transgenic, mutant stock
•
•
•
•
•
Strain
MGI:6467512 | B6;FVB-Tg(Lfng-cre/ERT2)1Mmsa/J
Attribute String: transgenic, mutant stock
•
•
•
•
•
Allele
Tg(Lfng*-LFNG)1Dihz | MGI:4420243
Name: transgene insertion 1, David Ish-Horowicz
Allele Type: Transgenic
Attribute String: Inserted expressed sequence
•
•
•
•
•
Genotype
Genotype
Symbol: Tg(Lfng*-LFNG)2Dihz/Tg(Lfng*-LFNG)2Dihz
Background: involves: C57BL/6J * CBA
Zygosity: hm
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Tg(Lfng-EGFP)HM340Gsat/?
Background: involves: FVB/NTac
Zygosity: ot
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Tg(Lfng-EGFP)HM340Gsat/?
Background: B6;FVB-Tg(Lfng-EGFP)HM340Gsat/Mmucd
Zygosity: ot
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Tg(Lfng-EGFP)HM340Gsat/?
Background: involves: CD-1 * FVB/NTac
Zygosity: ot
Has Mutant Allele: true
•
•
•
•
•
HT Experiment
E-MTAB-406 | Comparative transcription profiling of mouse, chicken and zebrafish in the presomitic mesoderms to identify cyclic genes of the segmentation clock
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
•
•
•
•
•
HT Experiment
E-TABM-163 | Transcription profiling of murine presomitic mesoderms of 17 samples at various time points to identify cyclic genes of the mouse segmentation clock
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
•
•
•
•
•
Protein Domain
IPR017374 | Fringe
Type: Family
Description: The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes [].Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species eg Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates.
•
•
•
•
•
Protein
O09009
Organism: Mus musculus/domesticus
Length: 332  
Fragment?: false
•
•
•
•
•
Protein
O09010
Organism: Mus musculus/domesticus
Length: 378  
Fragment?: false
•
•
•
•
•
Protein
O09008
Organism: Mus musculus/domesticus
Length: 321  
Fragment?: false
•
•
•
•
•
Protein
Q3UPI0
Organism: Mus musculus/domesticus
Length: 321  
Fragment?: false
•
•
•
•
•
Protein
B2RRW2
Organism: Mus musculus/domesticus
Length: 378  
Fragment?: false
•
•
•
•
•
Publication
12417415 | -
First Author: Haltiwanger RS
Year: 2002
Journal: Biochim Biophys Acta
Title: Modulation of receptor signaling by glycosylation: fringe is an O-fucose-beta1,3-N-acetylglucosaminyltransferase.
Volume: 1573
Issue: 3
Pages: 328-35
•
•
•
•
•
Publication
14570055 | -
First Author: Haines N
Year: 2003
Journal: Nat Rev Mol Cell Biol
Title: Glycosylation regulates Notch signalling.
Volume: 4
Issue: 10
Pages: 786-97
•
•
•
•
•
Publication
7954826 | -
First Author: Irvine KD
Year: 1994
Journal: Cell
Title: fringe, a Boundary-specific signaling molecule, mediates interactions between dorsal and ventral cells during Drosophila wing development.
Volume: 79
Issue: 4
Pages: 595-606
•
•
•
•
•
Publication
9121551 | -
First Author: Rodriguez-Esteban C
Year: 1997
Journal: Nature
Title: Radical fringe positions the apical ectodermal ridge at the dorsoventral boundary of the vertebrate limb.
Volume: 386
Issue: 6623
Pages: 360-6
•
•
•
•
•
Publication
34035288 | J:331119
First Author: Kastan N
Year: 2021
Journal: Nat Commun
Title: Small-molecule inhibition of Lats kinases may promote Yap-dependent proliferation in postmitotic mammalian tissues.
Volume: 12
Issue: 1
Pages: 3100
•
•
•
•
•
Publication
34331868 | J:320573
First Author: Tao L
Year: 2021
Journal: Dev Cell
Title: Enhancer decommissioning imposes an epigenetic barrier to sensory hair cell regeneration.
Volume: 56
Issue: 17
Pages: 2471-2485.e5
•
•
•
•
•
Publication
33472062 | J:316905
First Author: Kubota M
Year: 2021
Journal: Cell Rep
Title: Greater epithelial ridge cells are the principal organoid-forming progenitors of the mouse cochlea.
Volume: 34
Issue: 3
Pages: 108646
•
•
•
•
•
Genotype
Genotype
Symbol: Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Tg(Lfng-cre/ERT2)1Mmsa/? Tg(Lfng-EGFP)HM340Gsat/?
Background: involves: 129S6/SvEvTac * C57BL/6NCrl * FVB/N
Zygosity: cn
Has Mutant Allele: true
•
•
•
•
•
Genotype
Genotype
Symbol: Gfi1/Gfi1<+> Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Tg(Lfng-EGFP)HM340Gsat/?
Background: involves: 129 * C57BL/6 * FVB/N
Zygosity: cn
Has Mutant Allele: true
•
•
•
•
•
Publication
16899492 | -
First Author: Sato T
Year: 2006
Journal: Glycobiology
Title: Molecular cloning and characterization of a novel human beta1,3-glucosyltransferase, which is localized at the endoplasmic reticulum and glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domain.
Volume: 16
Issue: 12
Pages: 1194-206
•
•
•
•
•
Publication
10899003 | -
First Author: Munro S
Year: 2000
Journal: Curr Biol
Title: The notch signalling regulator fringe acts in the Golgi apparatus and requires the glycosyltransferase signature motif DXD.
Volume: 10
Issue: 14
Pages: 813-20
•
•
•
•
•
Publication
11673471 | -
First Author: Ju T
Year: 2002
Journal: J Biol Chem
Title: Purification, characterization, and subunit structure of rat core 1 Beta1,3-galactosyltransferase.
Volume: 277
Issue: 1
Pages: 169-77
•
•
•
•
•
Protein Domain
IPR003378 | Fringe-like
Type: Family
Description: The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes [].Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates.Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [](not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including:Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains [].Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development [].
•
•
•
•
•
Publication
18775957 | J:169874
First Author: Sparrow DB
Year: 2008
Journal: Hum Mol Genet
Title: Mutation of Hairy-and-Enhancer-of-Split-7 in humans causes spondylocostal dysostosis.
Volume: 17
Issue: 23
Pages: 3761-6
•
•
•
•
•
Publication
16467359 | J:106551
First Author: Satoh W
Year: 2006
Journal: Development
Title: Sfrp1 and Sfrp2 regulate anteroposterior axis elongation and somite segmentation during mouse embryogenesis.
Volume: 133
Issue: 6
Pages: 989-99
•
•
•
•
•
Publication
9780837 | J:49261
First Author: Brahic M
Year: 1998
Journal: Bioessays
Title: Genetics of susceptibility to Theiler's virus infection.
Volume: 20
Issue: 8
Pages: 627-33
•
•
•
•
•
Publication
18706457 | J:142110
First Author: Shifley ET
Year: 2008
Journal: Biochim Biophys Acta
Title: Lunatic fringe protein processing by proprotein convertases may contribute to the short protein half-life in the segmentation clock.
Volume: 1783
Issue: 12
Pages: 2384-90
•
•
•
•
•
Publication
28263708 | J:244706
   
First Author: Bucks SA
Year: 2017
Journal: Elife
Title: Supporting cells remove and replace sensory receptor hair cells in a balance organ of adult mice.
Volume: 6
•
•
•
•
•
Publication
24023676 | J:206406
First Author: Korrapati S
Year: 2013
Journal: PLoS One
Title: Notch signaling limits supporting cell plasticity in the hair cell-damaged early postnatal murine cochlea.
Volume: 8
Issue: 8
Pages: e73276
•
•
•
•
•
Publication
26469390 | J:234063
 
First Author: Burns JC
Year: 2015
Journal: Nat Commun
Title: Single-cell RNA-Seq resolves cellular complexity in sensory organs from the neonatal inner ear.
Volume: 6
Pages: 8557
•
•
•
•
•
Publication
30455179 | J:267832
 
First Author: McInturff S
Year: 2018
Journal: Biol Open
Title: Characterization of spatial and temporal development of Type I and Type II hair cells in the mouse utricle using new cell-type-specific markers.
Volume: 7
Issue: 11
•
•
•
•
•
Publication
31033441 | J:275835
   
First Author: Jen HI
Year: 2019
Journal: Elife
Title: Transcriptomic and epigenetic regulation of hair cell regeneration in the mouse utricle and its potentiation by Atoh1.
Volume: 8
•
•
•
•
•
Publication
31915376 | J:293851
First Author: Yoshioka-Kobayashi K
Year: 2020
Journal: Nature
Title: Coupling delay controls synchronized oscillation in the segmentation clock.
Volume: 580
Issue: 7801
Pages: 119-123
•
•
•
•
•
Protein
Q9JJ06
Organism: Mus musculus/domesticus
Length: 363  
Fragment?: false
•
•
•
•
•
Protein
Q8BHT6
Organism: Mus musculus/domesticus
Length: 489  
Fragment?: false
•
•
•
•
•
Publication
35148175 | J:322710
First Author: Li XJ
Year: 2022
Journal: Sci Adv
Title: Follistatin promotes LIN28B-mediated supporting cell reprogramming and hair cell regeneration in the murine cochlea.
Volume: 8
Issue: 6
Pages: eabj7651
•
•
•
•
•
Publication
36445327 | J:339290
   
First Author: Iyer AA
Year: 2022
Journal: Elife
Title: Cellular reprogramming with ATOH1, GFI1, and POU4F3 implicate epigenetic changes and cell-cell signaling as obstacles to hair cell regeneration in mature mammals.
Volume: 11
•
•
•
•
•
Publication
10221902 | -
First Author: Artavanis-Tsakonas S
Year: 1999
Journal: Science
Title: Notch signaling: cell fate control and signal integration in development.
Volume: 284
Issue: 5415
Pages: 770-6
•
•
•
•
•
Publication
- | J:159099
     
First Author: McMahon A
Year: 2010
Journal: Unpublished
Title: Summary of mouse strains characterized by GUDMAP consortium.
•
•
•
•
•
Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
•
•
•
•
•
Publication
- | J:100256
     
First Author: The Gene Expression Nervous System Atlas (GENSAT) Project, The Rockefeller University (New York, NY)
Year: 2005
Journal: Database Download
Title: MGI download of GENSAT transgene data
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom