|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 301 to 399 out of 399 for Cit

<< First    < Previous  |  Next >    Last >>
0.025s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Publication
First Author: Furuyashiki T
Year: 1999
Journal: J Neurosci
Title: Citron, a Rho-target, interacts with PSD-95/SAP-90 at glutamatergic synapses in the thalamus.
Volume: 19
Issue: 1
Pages: 109-18
Publication
First Author: Gai M
Year: 2016
Journal: EMBO Rep
Title: ASPM and CITK regulate spindle orientation by affecting the dynamics of astral microtubules.
Volume: 17
Issue: 10
Pages: 1396-1409
Publication
First Author: Cunto FD
Year: 2002
Journal: J Cell Sci
Title: Essential role of citron kinase in cytokinesis of spermatogenic precursors.
Volume: 115
Issue: Pt 24
Pages: 4819-26
Publication
First Author: Shiraishi Y
Year: 1999
Journal: J Neurosci
Title: Cupidin, an isoform of Homer/Vesl, interacts with the actin cytoskeleton and activated rho family small GTPases and is expressed in developing mouse cerebellar granule cells.
Volume: 19
Issue: 19
Pages: 8389-400
Publication
First Author: Little JN
Year: 2021
Journal: J Neurosci
Title: Loss of Coiled-Coil Protein Cep55 Impairs Neural Stem Cell Abscission and Results in p53-Dependent Apoptosis in Developing Cortex.
Volume: 41
Issue: 15
Pages: 3344-3365
Publication
First Author: Schmahl J
Year: 2007
Journal: Nat Genet
Title: PDGF signaling specificity is mediated through multiple immediate early genes.
Volume: 39
Issue: 1
Pages: 52-60
Publication  
First Author: Baumgartner M
Year: 2018
Journal: Development
Title: Minor spliceosome inactivation causes microcephaly, owing to cell cycle defects and death of self-amplifying radial glial cells.
Volume: 145
Issue: 17
Publication  
First Author: Capecchi MR
Year: 2015
Journal: Nat Commun
Title: ASPM regulates symmetric stem cell division by tuning Cyclin E ubiquitination.
Volume: 6
Pages: 8763
Publication
First Author: Di Cunto F
Year: 2000
Journal: Neuron
Title: Defective neurogenesis in citron kinase knockout mice by altered cytokinesis and massive apoptosis.
Volume: 28
Issue: 1
Pages: 115-27
Publication
First Author: Nakano Y
Year: 2012
Journal: PLoS Genet
Title: A mutation in the Srrm4 gene causes alternative splicing defects and deafness in the Bronx waltzer mouse.
Volume: 8
Issue: 10
Pages: e1002966
Publication      
First Author: Mouse Genome Informatics and the Europhenome Mouse Phenotyping Resource
Year: 2010
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from Europhenome
Publication
First Author: Cobellis G
Year: 2005
Journal: Nucleic Acids Res
Title: Tagging genes with cassette-exchange sites.
Volume: 33
Issue: 4
Pages: e44
Publication
First Author: Miller JA
Year: 2013
Journal: Development
Title: Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates.
Volume: 140
Issue: 22
Pages: 4633-44
Publication      
First Author: Mouse Genome Informatics and the Wellcome Trust Sanger Institute Mouse Genetics Project (MGP)
Year: 2011
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the Wellcome Trust Sanger Institute (WTSI) Mouse Resources Portal
Publication
First Author: Ingham NJ
Year: 2019
Journal: PLoS Biol
Title: Mouse screen reveals multiple new genes underlying mouse and human hearing loss.
Volume: 17
Issue: 4
Pages: e3000194
Publication        
First Author: GO Central curators, GOA curators, Rhea curators
Year: 2020
Title: Automatic Gene Ontology annotation based on Rhea mapping
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2023
Title: TreeGrafter-generated GO annotations
Publication
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
Publication
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
Publication      
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
Publication
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Rat to Mouse ISO GO annotation transfer
Publication
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
Publication
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
Publication      
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
Publication
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
Publication
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
Publication        
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Publication
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
Publication
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
Publication      
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
Publication      
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
Publication      
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
Publication      
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
Publication      
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
Publication      
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
GO Term
GO Term
GO Term
Publication
First Author: Bikorimana JP
Year: 2022
Journal: iScience
Title: The CIt protocol: A blueprint to potentiate the immunogenicity of immunoproteasome-reprogrammed mesenchymal stromal cells.
Volume: 25
Issue: 12
Pages: 105537
Pathway
UniProt Feature
Begin: 19
Description: Phosphothreonine; by MLCK, CIT and ROCK2
Type: modified residue
End: 19
Protein
Organism: Mus musculus/domesticus
Length: 333  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 334  
Fragment?: false
DO Term
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein
Organism: Mus musculus/domesticus
Length: 603  
Fragment?: false
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein
Organism: Mus musculus/domesticus
Length: 2055  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 1674  
Fragment?: false
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein
Organism: Mus musculus/domesticus
Length: 193  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 196  
Fragment?: false
Publication
First Author: Ehrenberg AE
Year: 2020
Journal: Clin Exp Allergy
Title: Characterization of a 7 kDa pollen allergen belonging to the gibberellin-regulated protein family from three Cupressaceae species.
Volume: 50
Issue: 8
Pages: 964-972
Publication
First Author: Tuppo L
Year: 2013
Journal: Clin Exp Allergy
Title: Peamaclein--a new peach allergenic protein: similarities, differences and misleading features compared to Pru p 3.
Volume: 43
Issue: 1
Pages: 128-40
Publication
First Author: Inomata N
Year: 2020
Journal: Allergol Int
Title: Gibberellin-regulated protein allergy: Clinical features and cross-reactivity.
Volume: 69
Issue: 1
Pages: 11-18
Publication
First Author: Berrocal-Lobo M
Year: 2002
Journal: Plant Physiol
Title: Snakin-2, an antimicrobial peptide from potato whose gene is locally induced by wounding and responds to pathogen infection.
Volume: 128
Issue: 3
Pages: 951-61
Protein Domain
Type: Family
Description: This is the GASA gibberellin regulated cysteine rich protein (GRPs) family. The expression of these proteins is up-regulated by the plant hormone gibberellin, most of these proteins have a role in plant development and some of its members have antimicrobial activity [, ]. There are 12 cysteine residues conserved within the alignment giving the potential for these proteins to possess 6 disulphide bonds.Included in this family are some GRPs found in fruits and pollens that have been identified as allergens, including peach Pru p 7, Japanese apricot Pru m 7, orange Cit s 7, pomegranate Pun g 7, and cypress pollen GRP [, , ].
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein
Organism: Mus musculus/domesticus
Length: 724  
Fragment?: false
Publication
First Author: Bornstein MR
Year: 2023
Journal: Cell Metab
Title: Comprehensive quantification of metabolic flux during acute cold stress in mice.
Volume: 35
Issue: 11
Pages: 2077-2092.e6
Publication
First Author: Li X
Year: 2022
Journal: Aging Cell
Title: Cap-independent translation of GPLD1 enhances markers of brain health in long-lived mutant and drug-treated mice.
Volume: 21
Issue: 9
Pages: e13685
Publication
First Author: Senkevitch E
Year: 2012
Journal: Mol Genet Metab
Title: A novel biochemically salvageable animal model of hyperammonemia devoid of N-acetylglutamate synthase.
Volume: 106
Issue: 2
Pages: 160-8
Publication
First Author: Sun S
Year: 2021
Journal: Cell Death Dis
Title: Neutrophil extracellular traps impair intestinal barrier functions in sepsis by regulating TLR9-mediated endoplasmic reticulum stress pathway.
Volume: 12
Issue: 6
Pages: 606
Publication
First Author: Vissers YL
Year: 2004
Journal: Am J Physiol Gastrointest Liver Physiol
Title: NOS2 deficiency increases intestinal metabolism both in nonstimulated and endotoxemic mice.
Volume: 286
Issue: 5
Pages: G747-51
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein
Organism: Mus musculus/domesticus
Length: 193  
Fragment?: false
Publication
First Author: Loewen SK
Year: 1999
Journal: J Biol Chem
Title: Identification of amino acid residues responsible for the pyrimidine and purine nucleoside specificities of human concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2.
Volume: 274
Issue: 35
Pages: 24475-84
Publication
First Author: Izquierdo E
Year: 2022
Journal: Blood
Title: Extracellular vesicles and PD-L1 suppress macrophages, inducing therapy resistance in TP53-deficient B-cell malignancies.
Volume: 139
Issue: 25
Pages: 3617-3629
Publication
First Author: Li MX
Year: 1999
Journal: Biochim Biophys Acta
Title: Aberrations of ammonia metabolism in ornithine carbamoyltransferase-deficient spf-ash mice and their prevention by treatment with urea cycle intermediate amino acids and an ornithine aminotransferase inactivator.
Volume: 1455
Issue: 1
Pages: 1-11
Publication
First Author: Markovics A
Year: 2016
Journal: PLoS One
Title: Immune Recognition of Citrullinated Proteoglycan Aggrecan Epitopes in Mice with Proteoglycan-Induced Arthritis and in Patients with Rheumatoid Arthritis.
Volume: 11
Issue: 7
Pages: e0160284
Publication
First Author: Mackey JR
Year: 1998
Journal: Cancer Res
Title: Functional nucleoside transporters are required for gemcitabine influx and manifestation of toxicity in cancer cell lines.
Volume: 58
Issue: 19
Pages: 4349-57
Publication
First Author: Granados JZ
Year: 2020
Journal: PLoS One
Title: Activated whole-body arginine pathway in high-active mice.
Volume: 15
Issue: 6
Pages: e0235095
Publication
First Author: Meyer M
Year: 1997
Journal: J Mol Biol
Title: In vitro binding of the response regulator CitB and of its carboxy-terminal domain to A + T-rich DNA target sequences in the control region of the divergent citC and citS operons of Klebsiella pneumoniae.
Volume: 269
Issue: 5
Pages: 719-31
Publication
First Author: Ingmer H
Year: 1998
Journal: Mol Microbiol
Title: Destabilized inheritance of pSC101 and other Escherichia coli plasmids by DpiA, a novel two-component system regulator.
Volume: 29
Issue: 1
Pages: 49-59
Publication
First Author: Wintjens R
Year: 1996
Journal: J Mol Biol
Title: Structural classification of HTH DNA-binding domains and protein-DNA interaction modes.
Volume: 262
Issue: 2
Pages: 294-313
Publication
First Author: Müller CW
Year: 2001
Journal: Curr Opin Struct Biol
Title: Transcription factors: global and detailed views.
Volume: 11
Issue: 1
Pages: 26-32
Publication
First Author: Bott M
Year: 1997
Journal: Arch Microbiol
Title: Anaerobic citrate metabolism and its regulation in enterobacteria.
Volume: 167
Issue: 2-3
Pages: 78-88
Protein Domain
Type: Family
Description: Members of this group are response regulators containing CheY-like receiver and HTH (helix-turn-helix) DNA-binding domains. Several members of this group have been characterised as response regulators controlling the genes involved in metabolism of citrate or C4-dicarboxylates (aspartate, fumarate, malate, and succinate). In Klebsiella pneumoniae, the phosphorylation of CitB, subsequent conformational changes and increase of apparent DNA-binding affinity (10 to 100-fold), and specific binding to the two sites in the citC-citS intergenic region have been shown experimentally []. The DcuS/R system in Escherichia coli is involved in C4-dicarboxylate-stimulated regulation of the genes encoding the anaerobic fumarate respiratory system []. The DpiB/A system (synonyms: CriR, CitB, but note that the name CitB can also be used for unrelated proteins) is involved in transcriptional regulation of the cit operon (citrate-specific fermentation genes) and of genes involved in plasmid inheritance [].Response regulators of the microbial two-component signal transduction systems typically consist of an N-terminal CheY-like receiver domain and a C-terminal output (usually DNA-binding) domain [, ]. In response to an environmental stimulus, a phosphoryl group is transferred from the His residue of sensor histidine kinase to an Asp residue in the CheY-like receiver domain of the cognate response regulator. Phosphorylation of the CheY-like receiver domain induces conformational changes that activate an associated output domain. Phosphorylation-induced conformational changes in the response regulator molecule have been demonstrated in direct structural studies []. In members of this group, these conformational changes affect the binding of the associated HTH domains to their recognition sites on the chromosomal DNA.HTH domains are very diverse with respect to their sequence, as well as the specific binding sites that they recognise [, , ]. There have been several attempts to classify them [, ]. A detailed sequence analysis of response regulator proteins has been hampered by the remarkable sequence conservation of their N-terminal CheY-like receiver domain, which largely masked (dis)similarities of the DNA-binding domains of various response regulators.For additional information please see [, ].
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein
Organism: Mus musculus/domesticus
Length: 192  
Fragment?: false
Publication
First Author: Galsgaard KD
Year: 2020
Journal: Am J Physiol Gastrointest Liver Physiol
Title: Glucagon receptor signaling is not required for N-carbamoyl glutamate- and l-citrulline-induced ureagenesis in mice.
Volume: 318
Issue: 5
Pages: G912-G927
Publication
First Author: Zientz E
Year: 1998
Journal: J Bacteriol
Title: Fumarate regulation of gene expression in Escherichia coli by the DcuSR (dcuSR genes) two-component regulatory system.
Volume: 180
Issue: 20
Pages: 5421-5
Publication
First Author: Lewis RJ
Year: 2002
Journal: J Mol Biol
Title: Dimer formation and transcription activation in the sporulation response regulator Spo0A.
Volume: 316
Issue: 2
Pages: 235-45
Publication
First Author: Volz K
Year: 1993
Journal: Biochemistry
Title: Structural conservation in the CheY superfamily.
Volume: 32
Issue: 44
Pages: 11741-53
Publication  
First Author: Stock AM
Year: 2000
Journal: Annu Rev Biochem
Title: Two-component signal transduction.
Volume: 69
Pages: 183-215
Publication
First Author: West AH
Year: 2001
Journal: Trends Biochem Sci
Title: Histidine kinases and response regulator proteins in two-component signaling systems.
Volume: 26
Issue: 6
Pages: 369-76