Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3557722 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702122 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1668822 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757722 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1738322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1802422 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1768022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was not detected in the skull (base and vault). |
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:2672022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was not detected in whisker follicle. |
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4948517 |
Assay Type: |
Northern blot |
Annotation Date: |
2011-04-28 |
Strength: |
Present |
Sex: |
Pooled |
Emaps: |
EMAPS:1684628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:4948526 |
Age: |
postnatal week 8-10 |
|
|
Specimen Label: |
Liver |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4948517 |
Assay Type: |
Northern blot |
Annotation Date: |
2011-04-28 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603922 |
|
Stage: |
TS22 |
Assay Id: |
MGI:4948526 |
Age: |
embryonic day 14.0 |
|
|
Specimen Label: |
Embryo |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4948517 |
Assay Type: |
Northern blot |
Annotation Date: |
2011-04-28 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1797228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:4948526 |
Age: |
postnatal week 8-10 |
|
|
Specimen Label: |
Testes |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7264673 |
Assay Type: |
RT-PCR |
Annotation Date: |
2022-04-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603912 |
|
Stage: |
TS12 |
Assay Id: |
MGI:7264692 |
Age: |
embryonic day 8.25 |
|
|
Specimen Label: |
Jmjd5 delta/delta |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1691622 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1737322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1619822 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3276322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was not detected in the face/soft tissues. |
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1706822 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1738222 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684922 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1755022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1610422 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1753622 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1795022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3286922 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754422 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1672822 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689622 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1647022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3274322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1685322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3272922 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was not detected in the skeleton (limbs, shoulder, hip). |
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1718522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1781522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1672722 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3274122 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1624622 |
Pattern: |
Regionally restricted |
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
Image: |
EH3792; Specimen C3465 |
Note: |
Expression was weak in the digestive system. |
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1736222 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1832122 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1833322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1821522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1756322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416568 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-20 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5425154 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EH3792; Specimen C3465 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4948531 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2011-04-28 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:4948542 |
Age: |
postnatal |
|
Note: |
Expression appears to be generally uniform in the tissue, although it does not appear to be present in the vasculature. |
Specimen Label: |
Brain |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tran-Viet KN |
Year: |
2013 |
Journal: |
Am J Hum Genet |
Title: |
Mutations in SCO2 are associated with autosomal-dominant high-grade myopia. |
Volume: |
92 |
Issue: |
5 |
Pages: |
820-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ishimura A |
Year: |
2016 |
Journal: |
Cell Tissue Res |
Title: |
Jmjd5 functions as a regulator of p53 signaling during mouse embryogenesis. |
Volume: |
363 |
Issue: |
3 |
Pages: |
723-33 |
|
•
•
•
•
•
|
Publication |
First Author: |
Visel A |
Year: |
2004 |
Journal: |
Nucleic Acids Res |
Title: |
GenePaint.org: an atlas of gene expression patterns in the mouse embryo. |
Volume: |
32 |
Issue: |
Database issue |
Pages: |
D552-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
255
|
Fragment?: |
false |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
42 |
Description: |
Protein SCO2 homolog, mitochondrial |
Type: |
chain |
End: |
255 |
|
•
•
•
•
•
|
Allele |
Name: |
SCO2 cytochrome c oxidase assembly protein; wild type |
Allele Type: |
Not Specified |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Leary SC |
Year: |
2007 |
Journal: |
Cell Metab |
Title: |
The human cytochrome c oxidase assembly factors SCO1 and SCO2 have regulatory roles in the maintenance of cellular copper homeostasis. |
Volume: |
5 |
Issue: |
1 |
Pages: |
9-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Leary SC |
Year: |
2004 |
Journal: |
Hum Mol Genet |
Title: |
Human SCO1 and SCO2 have independent, cooperative functions in copper delivery to cytochrome c oxidase. |
Volume: |
13 |
Issue: |
17 |
Pages: |
1839-48 |
|
•
•
•
•
•
|
Allele |
Name: |
SCO2 cytochrome c oxidase assembly protein; targeted mutation 1.1, Eric A Schon |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Allele |
Name: |
SCO2 cytochrome c oxidase assembly protein; targeted mutation 2.1, Eric A Schon |
Allele Type: |
Targeted |
|
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
targeted mutation, mutant strain, coisogenic |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Sco2/Sco2 |
Background: |
129X1/SvJ-Sco2 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Sco2/Sco2 |
Background: |
129X1/SvJ-Sco2 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Bourens M |
Year: |
2014 |
Journal: |
Hum Mol Genet |
Title: |
Human COX20 cooperates with SCO1 and SCO2 to mature COX2 and promote the assembly of cytochrome c oxidase. |
Volume: |
23 |
Issue: |
11 |
Pages: |
2901-13 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Sco2/Sco2 |
Background: |
129X1/SvJ-Sco2/Sco2 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Banci L |
Year: |
2007 |
Journal: |
Structure |
Title: |
A structural characterization of human SCO2. |
Volume: |
15 |
Issue: |
9 |
Pages: |
1132-40 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents cytochrome c oxidase assembly factors Sco1 and Sco2 (Synthesis of Cytochrome c Oxidase, factors 1 and 2), mitochondrial inner membrane-tethered metallochaperones that have regulatory roles in the maintenance of cellular copper homeostasis. These proteins are essential for the assembly of the catalytic core of cytochrome c oxidase (COX or complex IV), as well as other roles in copper homeostasis such as mitochondrial redox signalling []. Both Sco1 and Sco2 contain highly conserved CXXXC motifs thought to be required for copper binidng.COX is the terminal enzyme of the energy transducing respiratory chain in eukaryotes and certain prokaryotes. It catalyses the transfer of electrons from cytochrome c to molecular oxygen and pumps protons across the mitochondrial inner membrane to establish a proton gradient for ATP synthesis. It consists of 12-13 protein subunits, with 3 subunits (Cox1-Cox3) forming the enzyme core. COX uses haem and copper as cofactors: Cox1 contains a 1-copper centre (CuB) that interacts with the haem moiety and Cox2 contains a 2-copper centre (CuA). Sco1 and Sco2 act as copper chaperones, transporting copper to the CuA site in Cox2, and are thought to have cooperative functions in COX assembly [, ]. In addition, human Sco2 is also the downstream mediator of the balance between the utilization of respiratory and glycolytic pathways []and both Sco1 and Sco2 may have regulatory roles in regulating cellular copper levels (homeostasis) []. Sco2 may have a copper-level-detection signalling role, acting upstream and in conjunction with Sco1.Defects in Sco1 are a cause of cytochrome c oxidase deficiency (COX deficiency) (OMIM:220110), a clinically heterogeneous disorder with features ranging from isolated myopathy to severe multisystem disease, and onset from infancy to adulthood. Defects in Sco2 are the cause of fatal infantile cardioencephalomyopathy with cytochrome c oxidase deficiency (FIC) (OMIM:604377, OMIM:220110), which is characterised by hypertrophic cardiomyopathy, lactic acidosis, and gliosis. |
|
•
•
•
•
•
|
Publication |
First Author: |
Williams JC |
Year: |
2005 |
Journal: |
J Biol Chem |
Title: |
Crystal structure of human SCO1: implications for redox signaling by a mitochondrial cytochrome c oxidase "assembly" protein. |
Volume: |
280 |
Issue: |
15 |
Pages: |
15202-11 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
229
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Wei J |
Year: |
2023 |
Journal: |
iScience |
Title: |
Hepatic depletion of nucleolar protein mDEF causes excessive mitochondrial copper accumulation associated with p53 and NRF1 activation. |
Volume: |
26 |
Issue: |
7 |
Pages: |
107220 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
247
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Mourier A |
Year: |
2014 |
Journal: |
Hum Mol Genet |
Title: |
Loss of LRPPRC causes ATP synthase deficiency. |
Volume: |
23 |
Issue: |
10 |
Pages: |
2580-92 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang S |
Year: |
2018 |
Journal: |
Cell Res |
Title: |
KRAB-type zinc-finger proteins PITA and PISA specifically regulate p53-dependent glycolysis and mitochondrial respiration. |
Volume: |
28 |
Issue: |
5 |
Pages: |
572-592 |
|
•
•
•
•
•
|
Publication |
First Author: |
Antonicka H |
Year: |
2003 |
Journal: |
Hum Mol Genet |
Title: |
Mutations in COX10 result in a defect in mitochondrial heme A biosynthesis and account for multiple, early-onset clinical phenotypes associated with isolated COX deficiency. |
Volume: |
12 |
Issue: |
20 |
Pages: |
2693-702 |
|
•
•
•
•
•
|
Publication |
First Author: |
Napoli E |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Mitochondrial dysfunction in Pten haplo-insufficient mice with social deficits and repetitive behavior: interplay between Pten and p53. |
Volume: |
7 |
Issue: |
8 |
Pages: |
e42504 |
|
•
•
•
•
•
|
Publication |
First Author: |
Buchwald P |
Year: |
1991 |
Journal: |
Mol Gen Genet |
Title: |
Immunological identification of yeast SCO1 protein as a component of the inner mitochondrial membrane. |
Volume: |
229 |
Issue: |
3 |
Pages: |
413-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Buggy J |
Year: |
1995 |
Journal: |
J Bacteriol |
Title: |
Cloning and characterization of senC, a gene involved in both aerobic respiration and photosynthesis gene expression in Rhodobacter capsulatus. |
Volume: |
177 |
Issue: |
23 |
Pages: |
6958-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mattatall NR |
Year: |
2000 |
Journal: |
J Biol Chem |
Title: |
Characterization of YpmQ, an accessory protein required for the expression of cytochrome c oxidase in Bacillus subtilis. |
Volume: |
275 |
Issue: |
37 |
Pages: |
28802-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pecina P |
Year: |
2004 |
Journal: |
Physiol Res |
Title: |
Genetic defects of cytochrome c oxidase assembly. |
Volume: |
53 Suppl 1 |
|
Pages: |
S213-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nittis T |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Yeast Sco1, a protein essential for cytochrome c oxidase function is a Cu(I)-binding protein. |
Volume: |
276 |
Issue: |
45 |
Pages: |
42520-6 |
|
•
•
•
•
•
|