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Search results 201 to 260 out of 260 for Rad18

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Type Details Score
Publication
20837403 | -
First Author: Woodruff RV
Year: 2010
Journal: DNA Repair (Amst)
Title: The unusual UBZ domain of Saccharomyces cerevisiae polymerase η.
Volume: 9
Issue: 11
Pages: 1130-41
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Publication
25799058 | -
First Author: Toma A
Year: 2015
Journal: PLoS One
Title: Structural basis for ubiquitin recognition by ubiquitin-binding zinc finger of FAAP20.
Volume: 10
Issue: 3
Pages: e0120887
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Publication
20385554 | -
First Author: Yang K
Year: 2010
Journal: J Biol Chem
Title: RAD18-dependent recruitment of SNM1A to DNA repair complexes by a ubiquitin-binding zinc finger.
Volume: 285
Issue: 25
Pages: 19085-91
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Publication
27370208 | -
First Author: Thurston TL
Year: 2016
Journal: EMBO J
Title: Recruitment of TBK1 to cytosol-invading Salmonella induces WIPI2-dependent antibacterial autophagy.
Volume: 35
Issue: 16
Pages: 1779-92
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Protein
Q69ZT1
Organism: Mus musculus/domesticus
Length: 1020  
Fragment?: false
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Protein
Q6P1D7
Organism: Mus musculus/domesticus
Length: 1565  
Fragment?: false
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Protein
Q5U5Q9
Organism: Mus musculus/domesticus
Length: 727  
Fragment?: false
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Protein
G3X912
Organism: Mus musculus/domesticus
Length: 497  
Fragment?: false
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Protein
E9Q577
Organism: Mus musculus/domesticus
Length: 727  
Fragment?: false
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Protein
A0A0R4J073
Organism: Mus musculus/domesticus
Length: 727  
Fragment?: false
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Protein
A0A0R4J183
Organism: Mus musculus/domesticus
Length: 446  
Fragment?: false
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Protein
Q91XU0
Organism: Mus musculus/domesticus
Length: 660  
Fragment?: false
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Protein
Q24JP3
Organism: Mus musculus/domesticus
Length: 464  
Fragment?: false
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Protein
Q6P9P0
Organism: Mus musculus/domesticus
Length: 1278  
Fragment?: false
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Protein
Q8BZ50
Organism: Mus musculus/domesticus
Length: 323  
Fragment?: true
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Protein
Q3TST9
Organism: Mus musculus/domesticus
Length: 681  
Fragment?: true
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Protein
E9Q839
Organism: Mus musculus/domesticus
Length: 1163  
Fragment?: false
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Protein
E9PXB2
Organism: Mus musculus/domesticus
Length: 523  
Fragment?: false
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Protein
A0A494BB77
Organism: Mus musculus/domesticus
Length: 546  
Fragment?: false
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Protein
B7ZWK5
Organism: Mus musculus/domesticus
Length: 1140  
Fragment?: false
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Protein
A0A0A6YWQ3
Organism: Mus musculus/domesticus
Length: 140  
Fragment?: true
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Protein
A0A494BB73
Organism: Mus musculus/domesticus
Length: 518  
Fragment?: false
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Protein
A0A0A6YWE8
Organism: Mus musculus/domesticus
Length: 98  
Fragment?: true
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Protein
E9PUL8
Organism: Mus musculus/domesticus
Length: 379  
Fragment?: false
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Protein
B2RXQ3
Organism: Mus musculus/domesticus
Length: 1163  
Fragment?: false
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Publication
17081983 | -
First Author: Olsen JV
Year: 2006
Journal: Cell
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
Volume: 127
Issue: 3
Pages: 635-48
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Publication
32389690 | -
First Author: Adamus M
Year: 2020
Journal: J Mol Biol
Title: Molecular Insights into the Architecture of the Human SMC5/6 Complex.
Volume: 432
Issue: 13
Pages: 3820-3837
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Publication
22343915 | -
First Author: Ali AM
Year: 2012
Journal: Blood
Title: FAAP20: a novel ubiquitin-binding FA nuclear core-complex protein required for functional integrity of the FA-BRCA DNA repair pathway.
Volume: 119
Issue: 14
Pages: 3285-94
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Publication
22266823 | J:245373
First Author: Kim H
Year: 2012
Journal: Nat Struct Mol Biol
Title: Regulation of Rev1 by the Fanconi anemia core complex.
Volume: 19
Issue: 2
Pages: 164-70
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Publication
22705371 | -
First Author: Yan Z
Year: 2012
Journal: Mol Cell
Title: A ubiquitin-binding protein, FAAP20, links RNF8-mediated ubiquitination to the Fanconi anemia DNA repair network.
Volume: 47
Issue: 1
Pages: 61-75
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Protein Domain
IPR031490 | UBZ2_FAAP20
Type: Domain
Description: The ubiquitin-binding zinc finger (UBZ) is a type of zinc-coordinating β-β-α fold domain found mainly in proteins involved in DNA repair and transcriptional regulation. UBZ domains coordinate a zinc ion with cysteine or histidine residues; depending on their amino acid sequence, UBZ domains are classified into several families [, ]. Type 1 UBZs are CCHH-type zinc fingers found in tandem UBZ domains of TAX1-binding protein 1 (TAX1BP1) [, , ], type 2 UBZs are CCHC-type zinc fingers found in FAAP20 which is a subunit of the Fanconi anemia (FA) core complex [, ], type 3 UBZs are CCHH-type zinc fingers found only in the Y-family translesion polymerase eta [, , ], and type 4 UBZs are CCHC-type zinc fingers found in Y-family translesion polymerase kappa, Werner helicase-interacting protein 1 (WRNIP1), and Rad18 [, , ]. The UBZ domain consists of two short antiparallel β-strands followed by one α-helix. The α-helix packs against the β-strands with a zinc ion sandwiched between the α-helix and the β-strands. The zinc ion is coordinated by two cysteines located on the fingertip formed by the β-strands and two histidines [, ]or one histidine and one cysteine []on the α-helix [].This domain is the type 2 UBZ found in Fanconi anemia-associated protein of 20kDa (FAAP20) [, , , ].
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Protein Domain
IPR041298 | UBZ3
Type: Domain
Description: The ubiquitin-binding zinc finger (UBZ) is a type of zinc-coordinating β-β-α fold domain found mainly in proteins involved in DNA repair and transcriptional regulation. UBZ domains coordinate a zinc ion with cysteine or histidine residues; depending on their amino acid sequence, UBZ domains are classified into several families [, ]. Type 1 UBZs are CCHH-type zinc fingers found in tandem UBZ domains of TAX1-binding protein 1 (TAX1BP1) [, , ], type 2 UBZs are CCHC-type zinc fingers found in FAAP20 which is a subunit of the Fanconi anemia (FA) core complex [, ], type 3 UBZs are CCHH-type zinc fingers found only in the Y-family translesion polymerase eta [, , ], and type 4 UBZs are CCHC-type zinc fingers found in Y-family translesion polymerase kappa, Werner helicase-interacting protein 1 (WRNIP1), and Rad18 [, , ]. The UBZ domain consists of two short antiparallel β-strands followed by one α-helix. The α-helix packs against the β-strands with a zinc ion sandwiched between the α-helix and the β-strands. The zinc ion is coordinated by two cysteines located on the fingertip formed by the β-strands and two histidines [, ]or one histidine and one cysteine []on the α-helix [].This entry represents type 3 UBZ found in DNA polymerase eta (). It is important in the recruitment of the polymerase to the stalled replication machinery in translesion synthesis. The UBZ domain adopts a classical C2H2 zinc-finger structure characterized by a β-β-α fold [].
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Protein
Q9QUG2
Organism: Mus musculus/domesticus
Length: 852  
Fragment?: false
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Protein
Q5Q9H6
Organism: Mus musculus/domesticus
Length: 772  
Fragment?: false
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Protein
Q5Q9H7
Organism: Mus musculus/domesticus
Length: 793  
Fragment?: false
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Protein
Q3UN58
Organism: Mus musculus/domesticus
Length: 186  
Fragment?: false
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Protein
F6QQ55
Organism: Mus musculus/domesticus
Length: 160  
Fragment?: true
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Publication
22396592 | -
First Author: Leung JW
Year: 2012
Journal: Proc Natl Acad Sci U S A
Title: Fanconi anemia (FA) binding protein FAAP20 stabilizes FA complementation group A (FANCA) and participates in interstrand cross-link repair.
Volume: 109
Issue: 12
Pages: 4491-6
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Publication
28314591 | J:259425
First Author: Whang MI
Year: 2017
Journal: Immunity
Title: The Ubiquitin Binding Protein TAX1BP1 Mediates Autophagasome Induction and the Metabolic Transition of Activated T Cells.
Volume: 46
Issue: 3
Pages: 405-420
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Publication
18796167 | -
 
First Author: Dubin-Bar D
Year: 2008
Journal: BMC Cell Biol
Title: The Drosophila IKK-related kinase (Ik2) and Spindle-F proteins are part of a complex that regulates cytoskeleton organization during oogenesis.
Volume: 9
Pages: 51
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Publication
16540510 | -
First Author: Abdu U
Year: 2006
Journal: Development
Title: spn-F encodes a novel protein that affects oocyte patterning and bristle morphology in Drosophila.
Volume: 133
Issue: 8
Pages: 1477-84
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Protein Domain
IPR041641 | CALCOCO1/2_Zn_UBZ1
Type: Domain
Description: The ubiquitin-binding zinc finger (UBZ) is a type of zinc-coordinating β-β-α fold domain found mainly in proteins involved in DNA repair and transcriptional regulation. UBZ domains coordinate a zinc ion with cysteine or histidine residues; depending on their amino acid sequence, UBZ domains are classified into several families [, ]. Type 1 UBZs are CCHH-type zinc fingers found in tandem UBZ domains of TAX1-binding protein 1 (TAX1BP1) [, , ], type 2 UBZs are CCHC-type zinc fingers found in FAAP20 which is a subunit of the Fanconi anemia (FA) core complex [, ], type 3 UBZs are CCHH-type zinc fingers found only in the Y-family translesion polymerase eta [, , ], and type 4UBZs are CCHC-type zinc fingers found in Y-family translesion polymerase kappa, Werner helicase-interacting protein 1 (WRNIP1), and Rad18 [, , ]. The UBZ domain consists of two short antiparallel β-strands followed by one α-helix. The α-helix packs against the β-strands with a zinc ion sandwiched between the α-helix and the β-strands. The zinc ion is coordinated by two cysteines located on the fingertip formed by the β-strands and two histidines [, ]or one histidine and one cysteine []on the α-helix [].This entry represents the UBZ1 type zinc finger domain found in calcium-binding and coiled-coil domain 1/2 (CALCOCO1/2), tax-binding protein 1 and protein spindle-F.This domain is a typical C2H2-type zinc finger which specifically recognizes mono-ubiquitin or poly-ubiquitin chain. The overall ubiquitin-binding mode utilizes the C-terminal α-helix to interact with the solvent-exposed surface of the central β-sheet of ubiquitin, similar to that observed in the RABGEF1/Rabex-5 or POLN/Pol-eta zinc finger [].CALCOCO2 (also known as NDP25) is an ubiquitin-binding autophagy receptor involved in the selective autophagic degradation of invading pathogens []. Tax binding protein 1 is a ubiquitin binding protein []and protein spindle-F plays a role in oocyte axis determination and microtubule organization during oogenesis in Drosophila [, ].
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Protein
Q8CGU1
Organism: Mus musculus/domesticus
Length: 691  
Fragment?: false
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Protein
P70347
Organism: Mus musculus/domesticus
Length: 448  
Fragment?: false
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Protein
A2A9T0
Organism: Mus musculus/domesticus
Length: 611  
Fragment?: false
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Protein
Q3UKC1
Organism: Mus musculus/domesticus
Length: 814  
Fragment?: false
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Protein
A0A2R8VKP5
Organism: Mus musculus/domesticus
Length: 606  
Fragment?: false
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Protein
Q8C2D3
Organism: Mus musculus/domesticus
Length: 413  
Fragment?: false
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Protein
Q3UGW0
Organism: Mus musculus/domesticus
Length: 414  
Fragment?: false
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Protein
Q3TNB4
Organism: Mus musculus/domesticus
Length: 413  
Fragment?: false
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Protein
A2AR76
Organism: Mus musculus/domesticus
Length: 447  
Fragment?: false
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Protein
F6Q5V4
Organism: Mus musculus/domesticus
Length: 232  
Fragment?: true
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Protein
Q8R383
Organism: Mus musculus/domesticus
Length: 413  
Fragment?: false
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Protein
Z4YKN2
Organism: Mus musculus/domesticus
Length: 610  
Fragment?: false
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Publication
17525332 | -
First Author: Matsuoka S
Year: 2007
Journal: Science
Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
Volume: 316
Issue: 5828
Pages: 1160-6
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Protein
Q9JJN0
Organism: Mus musculus/domesticus
Length: 694  
Fragment?: false
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Protein
I6L9K1
Organism: Mus musculus/domesticus
Length: 556  
Fragment?: false
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
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Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
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