Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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|
|
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
287
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
843
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen Q |
Year: |
2022 |
Journal: |
Blood |
Title: |
Inhibition of LDHA to induce eEF2 release enhances thrombocytopoiesis. |
Volume: |
139 |
Issue: |
19 |
Pages: |
2958-2971 |
|
•
•
•
•
•
|
Publication |
First Author: |
David O |
Year: |
2020 |
Journal: |
Front Mol Neurosci |
Title: |
D1 Dopamine Receptor Activation Induces Neuronal eEF2 Pathway-Dependent Protein Synthesis. |
Volume: |
13 |
|
Pages: |
67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Knight JR |
Year: |
2021 |
Journal: |
Elife |
Title: |
Rpl24Bst mutation suppresses colorectal cancer by promoting eEF2 phosphorylation via eEF2K. |
Volume: |
10 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Beckelman BC |
Year: |
2019 |
Journal: |
J Clin Invest |
Title: |
Genetic reduction of eEF2 kinase alleviates pathophysiology in Alzheimer's disease model mice. |
Volume: |
129 |
Issue: |
2 |
Pages: |
820-833 |
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•
•
•
•
•
|
Publication |
First Author: |
Delaidelli A |
Year: |
2017 |
Journal: |
Cell Death Differ |
Title: |
MYCN amplified neuroblastoma requires the mRNA translation regulator eEF2 kinase to adapt to nutrient deprivation. |
Volume: |
24 |
Issue: |
9 |
Pages: |
1564-1576 |
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•
•
•
•
•
|
Publication |
First Author: |
Hayes H |
Year: |
1996 |
Journal: |
Cytogenet Cell Genet |
Title: |
Localization of ZNF164, ZNF146, GGTA1, SOX2, PRLR and EEF2 on homoeologous cattle, sheep and goat chromosomes by fluorescent in situ hybridization and comparison with the human gene map. |
Volume: |
72 |
Issue: |
4 |
Pages: |
342-6 |
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•
•
•
•
•
|
Publication |
First Author: |
Spahn CM |
Year: |
2004 |
Journal: |
EMBO J |
Title: |
Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation. |
Volume: |
23 |
Issue: |
5 |
Pages: |
1008-19 |
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•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Eukaryotic eIF-5A was initially thought to function as a translation initiation factor, based on its ability to stimulate methionyl-puromycin synthesis. However, subsequent work revealed a role for eIF5A in translation elongation [, ]. Depletion or inactivation of eIF-5A in the yeast Saccharomyces cerevisiae (Baker's yeast) resulted in the accumulation of polysomes and an increase in ribosomal transit times. Addition of recombinant eIF-5A from yeast, but not a derivative lacking hypusine, enhanced the rate of tripeptide synthesis in vitro. Moreover, inactivation of eIF-5A mimicked the effects of the eEF2 inhibitor sordarin, indicating that eIF-5A might function together with eEF2 to promote ribosomal translocation. Finally, it was shown that eIF5A is specifically required to promote peptide-bond formation between consecutive proline residues. It has been proposed to stimulate the peptidyl-transferase activity of the ribosome and facilitate the reactivity of poor substrates like proline [].eIF-5A is a cofactor for the Rev and Rex transactivator proteins of human immunodeficiency virus-1 and T-cell leukaemia virus I, respectively [, , ]. IF-5A is the sole protein in eukaryotes and archaea to contain the unusual amino acid hypusine (Ne-(4-amino-2-hydroxybutyl)lysine) that is an absolute functional requirement. The first step in the post-translational modification of lysine to hypusine is catalyzed by the enzyme deoxyhypusine synthase, the structure of which has been reported []. The archaeal IF-5A proteins have not been studied as comprehensively as their eukaryotic homologues, though the crystal structure of the Pyrobaculum aerophilum protein has been determined. Unmodified P. aerophilum IF-5A is found to be a beta structure with two domains and three separate hydrophobic cores. The lysine (Lys42) that is post-translationally modified by deoxyhypusine synthase is found at one end of the IF-5A molecule in a turn between beta strands beta4 and beta5; this lysine residue is freely solvent accessible. The C-terminal domain is found to be homologous to the cold-shock protein CspA of E. coli, which has a well characterised RNA-binding fold, suggesting that IF-5A is involved in RNA binding [].This entry represents the archaeal IF-5A proteins. |
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•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE80633 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Smith PR |
Year: |
2021 |
Journal: |
Nat Commun |
Title: |
Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance. |
Volume: |
12 |
Issue: |
1 |
Pages: |
6789 |
|
•
•
•
•
•
|
Publication |
First Author: |
Um JW |
Year: |
2013 |
Journal: |
Neuron |
Title: |
Metabotropic glutamate receptor 5 is a coreceptor for Alzheimer aβ oligomer bound to cellular prion protein. |
Volume: |
79 |
Issue: |
5 |
Pages: |
887-902 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou Q |
Year: |
2022 |
Journal: |
Mol Cell |
Title: |
Energy sensor AMPK gamma regulates translation via phosphatase PPP6C independent of AMPK alpha. |
Volume: |
82 |
Issue: |
24 |
Pages: |
4700-4711.e12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mossa A |
Year: |
2021 |
Journal: |
Mol Psychiatry |
Title: |
Developmental impaired Akt signaling in the Shank1 and Shank3 double knock-out mice. |
Volume: |
26 |
Issue: |
6 |
Pages: |
1928-1944 |
|
•
•
•
•
•
|
Publication |
First Author: |
Beck J |
Year: |
2013 |
Journal: |
Mol Microbiol |
Title: |
Woronin bodies, their impact on stress resistance and virulence of the pathogenic mould Aspergillus fumigatus and their anchoring at the septal pore of filamentous Ascomycota. |
Volume: |
89 |
Issue: |
5 |
Pages: |
857-71 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Eukaryotic eIF-5A was initially thought to function as a translation initiation factor, based on its ability to stimulate methionyl-puromycin synthesis. However, subsequent work revealed a role for eIF5A in translation elongation [, ]. Depletion or inactivation of eIF-5A in the yeast Saccharomyces cerevisiae (Baker's yeast) resulted in the accumulation of polysomes and an increase in ribosomal transit times. Addition of recombinant eIF-5A from yeast, but not a derivative lacking hypusine, enhanced the rate of tripeptide synthesis in vitro. Moreover, inactivation of eIF-5A mimicked the effects of the eEF2 inhibitor sordarin, indicating that eIF-5A might function together with eEF2 to promote ribosomal translocation. Finally, it was shown that eIF5A is specifically required to promote peptide-bond formation between consecutive proline residues. It has been proposed to stimulate the peptidyl-transferase activity of the ribosome and facilitate the reactivity of poor substrates like proline [].eIF-5A is a cofactor for the Rev and Rex transactivator proteins of human immunodeficiency virus-1 and T-cell leukaemia virus I, respectively [, , ]. IF-5A is the sole protein in eukaryotes and archaea to contain the unusual amino acid hypusine (Ne-(4-amino-2-hydroxybutyl)lysine) that is an absolute functional requirement. The first step in the post-translational modification of lysine to hypusine is catalyzed by the enzyme deoxyhypusine synthase, the structure of which has been reported []. The archaeal IF-5A proteins have not been studied as comprehensively as their eukaryotic homologues, though the crystal structure of the Pyrobaculum aerophilum protein has been determined. Unmodified P. aerophilum IF-5A is found to be a beta structure with two domains and three separate hydrophobic cores. The lysine (Lys42) that is post-translationally modified by deoxyhypusine synthase is found at one end of the IF-5A molecule in a turn between beta strands beta4 and beta5; this lysine residue is freely solvent accessible.The C-terminal domain is found to be homologous to the cold-shock protein CspA of E. coli, which has a well characterised RNA-binding fold, suggesting that IF-5A is involved in RNA binding [].This family also includes the Woronin body major protein Hex1, whose sequence and structure are similar to eukaryotic initiation factor 5A (eIF5A), suggesting they share a common ancestor during evolution []. Woronin bodies are important for stress resistance and virulence []. |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
187
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Park MH |
Year: |
1993 |
Journal: |
Biofactors |
Title: |
Hypusine: its post-translational formation in eukaryotic initiation factor 5A and its potential role in cellular regulation. |
Volume: |
4 |
Issue: |
2 |
Pages: |
95-104 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schnier J |
Year: |
1991 |
Journal: |
Mol Cell Biol |
Title: |
Translation initiation factor 5A and its hypusine modification are essential for cell viability in the yeast Saccharomyces cerevisiae. |
Volume: |
11 |
Issue: |
6 |
Pages: |
3105-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gutierrez E |
Year: |
2013 |
Journal: |
Mol Cell |
Title: |
eIF5A promotes translation of polyproline motifs. |
Volume: |
51 |
Issue: |
1 |
Pages: |
35-45 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schuller AP |
Year: |
2017 |
Journal: |
Mol Cell |
Title: |
eIF5A Functions Globally in Translation Elongation and Termination. |
Volume: |
66 |
Issue: |
2 |
Pages: |
194-205.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schopf FH |
Year: |
2019 |
Journal: |
Mol Cell |
Title: |
The Co-chaperone Cns1 and the Recruiter Protein Hgh1 Link Hsp90 to Translation Elongation via Chaperoning Elongation Factor 2. |
Volume: |
74 |
Issue: |
1 |
Pages: |
73-87.e8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Crevel G |
Year: |
2001 |
Journal: |
J Cell Sci |
Title: |
The Drosophila Dpit47 protein is a nuclear Hsp90 co-chaperone that interacts with DNA polymerase alpha. |
Volume: |
114 |
Issue: |
Pt 11 |
Pages: |
2015-25 |
|
•
•
•
•
•
|
Publication |
First Author: |
Crevel G |
Year: |
2008 |
Journal: |
PLoS One |
Title: |
The human TPR protein TTC4 is a putative Hsp90 co-chaperone which interacts with CDC6 and shows alterations in transformed cells. |
Volume: |
3 |
Issue: |
3 |
Pages: |
e0001737 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Co-chaperones are helper interacting proteins that modulate the chaperone cycle, being involved in substrate specificity and stimulation of chaperone activity of HSP90/70 and include other heat shock proteins, TPR containing proteins, cyclophilins and others. The TPR containing proteins possess an N-terminal TPR domain, which are more closely related to each other than to TPR domains from other proteins with different functionality [, ], which is involved in HSP90/70 direct interaction. The first N-terminal residues prior to the TRP domain and the C-terminal domain are involved and important for domain interplay and stabilisation of its interactions []. The Hsp90 chaperone machinery in eukaryotes comprises a number of distinct accessory factors, among them TTC4 from human and its homologues Cns1 from yeast and Dpit47 from Drosophila, structurally and functionally conserved from yeast to human. Cns1 is one of the few essential co-chaperones in yeast, important for maintaining translation elongation, specifically chaperoning the elongation factor eEF2. Cns1 interacts with Hgh1 and forms a quaternary complex together with eEF2 and Hsp90 mediating the proper folding and solubility of eEF2. Recently, the C-terminal structure has been solved and is called the "wheel"domain according to its 2D projection. It shows an overall fold consisting of a twisted five-stranded beta sheet surrounded by several alpha helices [].This entry represents the wheel domain found at the C terminus of yeast Cns1, human TTC4 and Drosophila Dpit47 proteins. |
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•
•
•
•
|
Publication |
First Author: |
Malik N |
Year: |
2023 |
Journal: |
Leukemia |
Title: |
mTORC1-selective activation of translation elongation promotes disease progression in chronic lymphocytic leukemia. |
Volume: |
37 |
Issue: |
12 |
Pages: |
2414-2425 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang W |
Year: |
2021 |
Journal: |
Neurobiol Aging |
Title: |
Suppression of the kinase for elongation factor 2 alleviates mGluR-LTD impairments in a mouse model of Alzheimer's disease. |
Volume: |
98 |
|
Pages: |
225-230 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ikeda Y |
Year: |
2009 |
Journal: |
J Biol Chem |
Title: |
Cardiac-specific deletion of LKB1 leads to hypertrophy and dysfunction. |
Volume: |
284 |
Issue: |
51 |
Pages: |
35839-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Moore CE |
Year: |
2015 |
Journal: |
Mol Cell Biol |
Title: |
Elongation Factor 2 Kinase Is Regulated by Proline Hydroxylation and Protects Cells during Hypoxia. |
Volume: |
35 |
Issue: |
10 |
Pages: |
1788-804 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adaikkan C |
Year: |
2018 |
Journal: |
Biol Psychiatry |
Title: |
Calcium/Calmodulin-Dependent Protein Kinase II and Eukaryotic Elongation Factor 2 Kinase Pathways Mediate the Antidepressant Action of Ketamine. |
Volume: |
84 |
Issue: |
1 |
Pages: |
65-75 |
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•
•
•
•
•
|
Publication |
First Author: |
López-Pelaéz M |
Year: |
2012 |
Journal: |
Mol Biol Cell |
Title: |
Cot/tpl2-MKK1/2-Erk1/2 controls mTORC1-mediated mRNA translation in Toll-like receptor-activated macrophages. |
Volume: |
23 |
Issue: |
15 |
Pages: |
2982-92 |
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•
•
•
•
•
|
Publication |
First Author: |
Gildish I |
Year: |
2012 |
Journal: |
Learn Mem |
Title: |
Impaired associative taste learning and abnormal brain activation in kinase-defective eEF2K mice. |
Volume: |
19 |
Issue: |
3 |
Pages: |
116-25 |
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•
•
•
•
•
|
Publication |
First Author: |
Argüello RJ |
Year: |
2018 |
Journal: |
J Cell Sci |
Title: |
SunRiSE - measuring translation elongation at single-cell resolution by means of flow cytometry. |
Volume: |
131 |
Issue: |
10 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Steiner JL |
Year: |
2015 |
Journal: |
Alcohol Clin Exp Res |
Title: |
Alcohol intoxication following muscle contraction in mice decreases muscle protein synthesis but not mTOR signal transduction. |
Volume: |
39 |
Issue: |
1 |
Pages: |
1-10 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yuan P |
Year: |
2003 |
Journal: |
Nat Struct Biol |
Title: |
A HEX-1 crystal lattice required for Woronin body function in Neurospora crassa. |
Volume: |
10 |
Issue: |
4 |
Pages: |
264-70 |
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•
•
•
•
•
|
Publication |
First Author: |
Liao DI |
Year: |
1998 |
Journal: |
Structure |
Title: |
Crystal structure of the NAD complex of human deoxyhypusine synthase: an enzyme with a ball-and-chain mechanism for blocking the active site. |
Volume: |
6 |
Issue: |
1 |
Pages: |
23-32 |
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•
•
•
•
•
|
Publication |
First Author: |
Peat TS |
Year: |
1998 |
Journal: |
Structure |
Title: |
Structure of translation initiation factor 5A from Pyrobaculum aerophilum at 1.75 A resolution. |
Volume: |
6 |
Issue: |
9 |
Pages: |
1207-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Saini P |
Year: |
2009 |
Journal: |
Nature |
Title: |
Hypusine-containing protein eIF5A promotes translation elongation. |
Volume: |
459 |
Issue: |
7243 |
Pages: |
118-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zimmermann HR |
Year: |
2018 |
Journal: |
J Neurochem |
Title: |
Genetic removal of eIF2α kinase PERK in mice enables hippocampal L-LTP independent of mTORC1 activity. |
Volume: |
146 |
Issue: |
2 |
Pages: |
133-144 |
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•
•
•
•
•
|
Publication |
First Author: |
Steiner JL |
Year: |
2014 |
Journal: |
PLoS One |
Title: |
Disruption of genes encoding eIF4E binding proteins-1 and -2 does not alter basal or sepsis-induced changes in skeletal muscle protein synthesis in male or female mice. |
Volume: |
9 |
Issue: |
6 |
Pages: |
e99582 |
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•
•
•
•
•
|
Publication |
First Author: |
Rose AJ |
Year: |
2009 |
Journal: |
J Physiol |
Title: |
A Ca(2+)-calmodulin-eEF2K-eEF2 signalling cascade, but not AMPK, contributes to the suppression of skeletal muscle protein synthesis during contractions. |
Volume: |
587 |
Issue: |
Pt 7 |
Pages: |
1547-63 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
211
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
61
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
41
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
76
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
154
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
153
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
149
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
386
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
386
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
386
|
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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•
•
•
•
•
|