Type |
Details |
Score |
Genotype |
Symbol: |
Tg(MECP2)3Hzo/? |
Background: |
either: (FVB/N x 129S6/SvEvTac)F1 or (FVB/N x C57BL/6J)F1 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mapt/Mapt |
Background: |
B6.Cg-Mapt |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 2, Qiang Chang |
Allele Type: |
Targeted |
Attribute String: |
Epitope tag |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE33457 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE59029 |
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou Z |
Year: |
2006 |
Journal: |
Neuron |
Title: |
Brain-specific phosphorylation of MeCP2 regulates activity-dependent Bdnf transcription, dendritic growth, and spine maturation. |
Volume: |
52 |
Issue: |
2 |
Pages: |
255-69 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wakefield RI |
Year: |
1999 |
Journal: |
J Mol Biol |
Title: |
The solution structure of the domain from MeCP2 that binds to methylated DNA. |
Volume: |
291 |
Issue: |
5 |
Pages: |
1055-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jordan C |
Year: |
2007 |
Journal: |
BMC Med Genet |
Title: |
Cerebellar gene expression profiles of mouse models for Rett syndrome reveal novel MeCP2 targets. |
Volume: |
8 |
|
Pages: |
36 |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Huda Y Zoghbi |
Allele Type: |
Transgenic |
Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE11150 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE43689 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Allele |
Name: |
regulatory region 295; endonuclease-mediated mutation 1, Huda Y Zoghbi |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Modified regulatory region |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 1, Qiang Chang |
Allele Type: |
Targeted |
Attribute String: |
Epitope tag, Modified isoform(s) |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen L |
Year: |
2015 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
MeCP2 binds to non-CG methylated DNA as neurons mature, influencing transcription and the timing of onset for Rett syndrome. |
Volume: |
112 |
Issue: |
17 |
Pages: |
5509-14 |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
E-GEOD-66211 |
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Huda Y Zoghbi |
Allele Type: |
Transgenic |
Attribute String: |
Humanized sequence, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
regulatory region 296; endonuclease-mediated mutation 1, Huda Y Zoghbi |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Modified regulatory region |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion A, Huda Y Zoghbi |
Allele Type: |
Transgenic |
Attribute String: |
Humanized sequence, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 1, Antonio Bedalov |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Methyl-CpG-binding protein 2 (Mecp2) binds specifically to methylated DNA and represses transcription through the recruitment of chromatin remodeling complexes containing histone deacetylase activities [, ]. It is a multi-functional protein whose function depends on its protein partners and post-translational modifications []. Mecp2 is required for proper mitotic spindle organisation []and affects proliferation and apoptosis []. Mutations in MeCP2 gene cause an X-linked neurodevelopmental disease known as Rett syndrome [].Methyl-CpG-binding domain protein 4 (MBD4) is a mismatch-specific DNA N-glycosylase involved in DNA repair. It has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites [, ]. |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE11596 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Transgene |
Type: |
transgene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Transgene |
Type: |
transgene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(MECP2)1Hzo/? |
Background: |
either: (FVB/N x 129S6/SvEvTac)F1 or (FVB/N x C57BL/6J)F1 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(MECP2)1Hzo/? |
Background: |
FVB-Tg(MECP2)1Hzo/J |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE42987 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, transgenic |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, transgenic |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(MECP2*R270X/GFP)AHzo/? |
Background: |
involves: 129P2/OlaHsd * FVB |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rr295/Rr295 |
Background: |
involves: C57BL/6J |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rr296/Rr296 |
Background: |
Not Specified |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou C |
Year: |
2019 |
Journal: |
Front Neurosci |
Title: |
Atypical Response Properties of the Auditory Cortex of Awake MECP2-Overexpressing Mice. |
Volume: |
13 |
|
Pages: |
439 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1196
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
108
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
175
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Petronzelli F |
Year: |
2000 |
Journal: |
J Biol Chem |
Title: |
Biphasic kinetics of the human DNA repair protein MED1 (MBD4), a mismatch-specific DNA N-glycosylase. |
Volume: |
275 |
Issue: |
42 |
Pages: |
32422-9 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
626
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1274
|
Fragment?: |
false |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, coisogenic |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Huda Y Zoghbi |
Allele Type: |
Transgenic |
Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Huda Y Zoghbi |
Allele Type: |
Transgenic |
Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 5.1, Zhaolan Zhou |
Allele Type: |
Targeted |
Attribute String: |
Epitope tag, No functional change |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion A, Huda Y Zoghbi |
Allele Type: |
Transgenic |
Attribute String: |
Humanized sequence, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(MECP2)3Hzo/? |
Background: |
involves: FVB |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE24320 |
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang T |
Year: |
2012 |
Journal: |
Sci Transl Med |
Title: |
Overexpression of methyl-CpG binding protein 2 impairs T(H)1 responses. |
Volume: |
4 |
Issue: |
163 |
Pages: |
163ra158 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
488
|
Fragment?: |
false |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
targeted mutation, mutant strain, congenic |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, transgenic |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 1.1, Adrian Bird |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 1.1, Joseph T Coyle |
Allele Type: |
Targeted |
Attribute String: |
Humanized sequence |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 3.1, Zhaolan Zhou |
Allele Type: |
Targeted |
Attribute String: |
Epitope tag, Humanized sequence |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; targeted mutation 4.1, Zhaolan Zhou |
Allele Type: |
Targeted |
Attribute String: |
Epitope tag, Humanized sequence |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
Allele |
Name: |
methyl CpG binding protein 2; endonuclease-mediated mutation 7.1, Adrian Bird |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mapt/Mapt |
Background: |
involves: 129/Sv * C57BL/6 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mapt/Mapt<+> |
Background: |
involves: 129/Sv * C57BL/6 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(MECP2*G273X/GFP)AHzo/? |
Background: |
involves: 129P2/OlaHsd * FVB |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2<+> |
Background: |
B6.129(FVB)-Mecp2 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE32870 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE24286 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
targeted mutation, mutant stock |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd * C57BL/6 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2 |
Background: |
involves: 129P2/OlaHsd * C57BL/6 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2<+> |
Background: |
involves: 129P2/OlaHsd * C57BL/6 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd * C57BL/6 * CBA |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2<+> |
Background: |
involves: 129P2/OlaHsd |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd * C57BL/6J * FVB/N |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd * FVB |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd * 129S6/SvEvTac |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129S6/SvEvTac * C57BL/6 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2<+> |
Background: |
involves: 129S6/SvEvTac * C57BL/6 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2 |
Background: |
involves: 129S6/SvEvTac * 129/SvJ |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129S6/SvEvTac * 129/SvJ |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
B6.129P2(C)-Mecp2/J |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2<+> |
Background: |
B6.129P2(C)-Mecp2/J |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd * CD-1 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/? |
Background: |
involves: 129P2/OlaHsd * C57BL/6J |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2 |
Background: |
involves: 129P2/OlaHsd |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2<+> |
Background: |
B6.129(FVB)-Mecp2 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mecp2/Mecp2<+> |
Background: |
B6.129(FVB)-Mecp2 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|