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Search results 201 to 287 out of 287 for Ccz1

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0.026s
Type Details Score
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1748823
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_10
Specimen Label: euxassay_008787_10
Detected: true
Specimen Num: 10
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_05
Specimen Label: euxassay_008787_05
Detected: true
Specimen Num: 5
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_06
Specimen Label: euxassay_008787_06
Detected: true
Specimen Num: 6
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_07
Specimen Label: euxassay_008787_07
Detected: true
Specimen Num: 7
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_08
Specimen Label: euxassay_008787_08
Detected: true
Specimen Num: 8
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_09
Specimen Label: euxassay_008787_09
Detected: true
Specimen Num: 9
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_10
Specimen Label: euxassay_008787_10
Detected: true
Specimen Num: 10
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_11
Specimen Label: euxassay_008787_11
Detected: true
Specimen Num: 11
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Single cells
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_12
Specimen Label: euxassay_008787_12
Detected: true
Specimen Num: 12
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1843623
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_06
Specimen Label: euxassay_008787_06
Detected: true
Specimen Num: 6
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1843623
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_07
Specimen Label: euxassay_008787_07
Detected: true
Specimen Num: 7
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1791823
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_10
Specimen Label: euxassay_008787_10
Detected: true
Specimen Num: 10
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1791823
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_11
Specimen Label: euxassay_008787_11
Detected: true
Specimen Num: 11
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1791823
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_14
Specimen Label: euxassay_008787_14
Detected: true
Specimen Num: 14
GXD Expression  
Probe: MGI:1005296
Assay Type: RNA in situ
Annotation Date: 2010-09-14
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1791823
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:4823354
Age: embryonic day 14.5
Image: euxassay_008787_15
Specimen Label: euxassay_008787_15
Detected: true
Specimen Num: 15
GXD Expression  
Probe: MGI:3584654
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1717122
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:3585848
Age: embryonic day 14.0
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: E14
Detected: true
Specimen Num: 1
Publication
First Author: Friedel RH
Year: 2007
Journal: Brief Funct Genomic Proteomic
Title: EUCOMM--the European conditional mouse mutagenesis program.
Volume: 6
Issue: 3
Pages: 180-5
Publication
First Author: Blackshaw S
Year: 2004
Journal: PLoS Biol
Title: Genomic analysis of mouse retinal development.
Volume: 2
Issue: 9
Pages: E247
Publication
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
Publication
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
Publication
First Author: Ko MS
Year: 2000
Journal: Development
Title: Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.
Volume: 127
Issue: 8
Pages: 1737-49
Publication      
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
Publication
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
Publication        
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Publication        
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Publication      
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
Publication        
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
Publication      
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
Publication        
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
Publication
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
Publication      
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
Publication        
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
Publication      
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
Publication      
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
Publication      
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
Publication      
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
Publication      
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
Publication      
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
Gene
Type: gene
Organism: dog, domestic
UniProt Feature
Begin: 2
Description: Vacuolar fusion protein CCZ1 homolog
Type: chain
End: 480
Gene
Type: gene
Organism: chimpanzee
Gene
Type: gene
Organism: frog, western clawed
Gene
Type: gene
Organism: macaque, rhesus
Gene
Type: gene
Organism: chimpanzee
Gene
Type: gene
Organism: frog, African clawed
Gene
Type: gene
Organism: frog, African clawed
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; wild type
Allele Type: Not Specified
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap AY0155, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap OST27262, Lexicon Genetics
Allele Type: Gene trapped
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap OST353816, Lexicon Genetics
Allele Type: Gene trapped
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap EUCJ0013e08, Helmholtz Zentrum Muenchen GmbH
Allele Type: Gene trapped
Allele
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; endonuclease-mediated mutation 2, GemPharmatech Co., Ltd
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap OST13664, Lexicon Genetics
Allele Type: Gene trapped
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap YTC047, BayGenomics
Allele Type: Gene trapped
Allele
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; endonuclease-mediated mutation 1, GemPharmatech Co., Ltd
Allele Type: Endonuclease-mediated
Attribute String: Conditional ready, No functional change
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap BC0717, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
Allele
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; targeted mutation 1e, Helmholtz Zentrum Muenchen GmbH
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap RRM081, BayGenomics
Allele Type: Gene trapped
Allele
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; targeted mutation 1a, Helmholtz Zentrum Muenchen GmbH
Allele Type: Targeted
Attribute String: Conditional ready, Null/knockout, Reporter
Allele  
Name: CCZ1 vacuolar protein trafficking and biogenesis associated; gene trap A047D02, German Gene Trap Consortium
Allele Type: Gene trapped
Protein Domain
Type: Domain
Description: Longin domains are evolutionarily conserved regions widely distributed among eukaryotes, involved in membrane dynamic regulation and exhibit similarities in primary sequence and secondary structure. Longin-like domains are found in FUZ and related proteins, such as the MON1 and HPS1 proteins [, , ]. The MON1/CCZ1 complex (MC1) is the GDP/GTP exchange factor (GEF) for the Rab GTPase Ypt7/Rab7 during vesicular trafficking []. The HPS1/HPS4 complex (BLOC-3) is a Rab32 and Rab38 GEF and is required for biogenesis of melanosomes and platelet dense granules []. Inturned (INTU) and Fuzzy (FUZ) proteins interact as members of the ciliogenesis and planar polarity effector (CPLANE) complex that controls recruitment of intraflagellar transport machinery to the basal body of primary cilia [, ]. Structurally, these domains are composed of an alpha/beta fold which contains five anti-parallel β-strands organised as a central β-sheet and around it, two α-helices [].This entry represents the first Longin domain found in INTU, CCZ1 and HPS4.
Protein Domain
Type: Domain
Description: Longin domains are evolutionarily conserved regions widely distributed among eukaryotes, involved in membrane dynamic regulation and exhibit similarities in primary sequence and secondary structure. Longin-like domains are found in FUZ and related proteins, such as the MON1 and HPS1 proteins [, , ]. The MON1/CCZ1 complex (MC1) is the GDP/GTP exchange factor (GEF) for the Rab GTPase Ypt7/Rab7 during vesicular trafficking []. The HPS1/HPS4 complex (BLOC-3) is a Rab32 and Rab38 GEF and is required for biogenesis of melanosomes and platelet dense granules []. Inturned (INTU) and Fuzzy (FUZ) proteins interact as members of the ciliogenesis and planar polarity effector (CPLANE) complex that controls recruitment of intraflagellar transport machinery to the basal body of primary cilia [, ]. Structurally, these domains are composed of an alpha/beta fold which contains five anti-parallel β-strands organised as a central β-sheet and around it, two α-helices [].This entry represents the second Longin domain found in INTU and CCZ1 proteins.
Publication
First Author: Cai CZ
Year: 2022
Journal: Theranostics
Title: Enhancing autophagy maturation with CCZ1-MON1A complex alleviates neuropathology and memory defects in Alzheimer disease models.
Volume: 12
Issue: 4
Pages: 1738-1755
Publication
First Author: Matsumoto N
Year: 2022
Journal: Sci Rep
Title: The lysosomal V-ATPase a3 subunit is involved in localization of Mon1-Ccz1, the GEF for Rab7, to secretory lysosomes in osteoclasts.
Volume: 12
Issue: 1
Pages: 8455
Publication  
First Author: Su X
Year: 2017
Journal: Sci Rep
Title: Over-expression of microRNA-1 causes arrhythmia by disturbing intracellular trafficking system.
Volume: 7
Pages: 46259
Protein
Organism: Mus musculus/domesticus
Length: 258  
Fragment?: true
Publication
First Author: Toriyama M
Year: 2016
Journal: Nat Genet
Title: The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery.
Volume: 48
Issue: 6
Pages: 648-56
Protein
Organism: Mus musculus/domesticus
Length: 942  
Fragment?: false
Publication
First Author: Gray RS
Year: 2009
Journal: Nat Cell Biol
Title: The planar cell polarity effector Fuz is essential for targeted membrane trafficking, ciliogenesis and mouse embryonic development.
Volume: 11
Issue: 10
Pages: 1225-32
Publication
First Author: Kinch LN
Year: 2006
Journal: Protein Sci
Title: Longin-like folds identified in CHiPS and DUF254 proteins: vesicle trafficking complexes conserved in eukaryotic evolution.
Volume: 15
Issue: 11
Pages: 2669-74
Publication  
First Author: Kiontke S
Year: 2017
Journal: Nat Commun
Title: Architecture and mechanism of the late endosomal Rab7-like Ypt7 guanine nucleotide exchange factor complex Mon1-Ccz1.
Volume: 8
Pages: 14034
Publication
First Author: Sanchez-Pulido L
Year: 2020
Journal: Bioinformatics
Title: Hexa-Longin domain scaffolds for inter-Rab signalling.
Volume: 36
Issue: 4
Pages: 990-993
Protein
Organism: Mus musculus/domesticus
Length: 671  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 671  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 671  
Fragment?: true
Protein
Organism: Mus musculus/domesticus
Length: 671  
Fragment?: false
Publication
First Author: Gerondopoulos A
Year: 2012
Journal: Curr Biol
Title: BLOC-3 mutated in Hermansky-Pudlak syndrome is a Rab32/38 guanine nucleotide exchange factor.
Volume: 22
Issue: 22
Pages: 2135-9
Publication
First Author: Trost M
Year: 2009
Journal: Immunity
Title: The phagosomal proteome in interferon-gamma-activated macrophages.
Volume: 30
Issue: 1
Pages: 143-54
Publication
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
Publication
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89