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Search results 1 to 100 out of 101 for Aar2

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Hits by Strain

Type Details Score
Gene
25980 | AAR2
Type: gene
Organism: human
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Gene
100127613 | aar2
Type: gene
Organism: frog, western clawed
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Gene
296312 | Aar2
Type: gene
Organism: rat
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Gene
477218 | AAR2
Type: gene
Organism: dog, domestic
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Gene
458215 | AAR2
Type: gene
Organism: chimpanzee
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Gene
533351 | AAR2
Type: gene
Organism: cattle
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Gene
419118 | AAR2
Type: gene
Organism: chicken
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Gene
431768 | aar2
Type: gene
Organism: zebrafish
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Gene
703053 | AAR2
Type: gene
Organism: macaque, rhesus
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Protein Domain
IPR007946 | AAR2
Type: Family
Description: This family consists of several eukaryotic AAR2-like proteins. The Saccharomyces cerevisiae protein AAR2 is involved in splicing pre-mRNAof the a1 cistron and other genes that are important for cell growth [].
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Protein Coding Gene
MGI:1915545 | Aar2
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein
B7ZD25
Organism: Mus musculus/domesticus
Length: 124  
Fragment?: true
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Protein
Q8C161
Organism: Mus musculus/domesticus
Length: 384  
Fragment?: false
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Protein
Q9D2V5
Organism: Mus musculus/domesticus
Length: 384  
Fragment?: false
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Protein
B7ZD24
Organism: Mus musculus/domesticus
Length: 42  
Fragment?: true
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Publication
1922071 | -
First Author: Nakazawa N
Year: 1991
Journal: Mol Cell Biol
Title: AAR2, a gene for splicing pre-mRNA of the MATa1 cistron in cell type control of Saccharomyces cerevisiae.
Volume: 11
Issue: 11
Pages: 5693-700
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Protein Coding Gene
MGP_CAROLIEiJ_G0024559 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0026765 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0026731 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0026702 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0026740 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0026483 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1915545 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0027189 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0025944 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0026460 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0026597 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0026564 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0026702 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0026585 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0027245 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0025678 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0026014 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0026004 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0025481 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
     
Probe: MGI:3527881
Assay Type: RNA in situ
Annotation Date: 2005-02-28
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1674419
Stage: TS19
Assay Id: MGI:3527882
Age: embryonic day 11.5
Specimen Label: E11.5 mesonephros
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3527881
Assay Type: RNA in situ
Annotation Date: 2005-02-28
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1636715
Stage: TS15
Assay Id: MGI:3527882
Age: embryonic day 9.5
Note: There is no expression present in the urogenital ridge.
Specimen Label: E9.5 urogenital ridge
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3527881
Assay Type: RNA in situ
Annotation Date: 2005-02-28
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1738319
Pattern: Not Specified
Stage: TS19
Assay Id: MGI:3527882
Age: embryonic day 11.5
Specimen Label: E11.5 genital ridge
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:3527881
Assay Type: RNA in situ
Annotation Date: 2005-02-28
Strength: Absent
Sex: Female
Emaps: EMAPS:1796222
Stage: TS22
Assay Id: MGI:3527882
Age: embryonic day 14.5
Specimen Label: E14.5 ovary
Detected: false
Specimen Num: 5
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GXD Expression
GXD Expression
     
Probe: MGI:3527881
Assay Type: RNA in situ
Annotation Date: 2005-02-28
Strength: Absent
Sex: Male
Emaps: EMAPS:1797222
Stage: TS22
Assay Id: MGI:3527882
Age: embryonic day 14.5
Specimen Label: E14.5 testis
Detected: false
Specimen Num: 4
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Publication
16267818 | J:117509
First Author: Cross M
Year: 2005
Journal: Proteomics
Title: A proteomics strategy for the enrichment of receptor-associated complexes.
Volume: 5
Issue: 18
Pages: 4754-63
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Publication
11044607 | J:65653
First Author: Wertz K
Year: 2000
Journal: Mech Dev
Title: Large-scale screen for genes involved in gonad development.
Volume: 98
Issue: 1-2
Pages: 51-70
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:73796
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Function or Process or Component Unknown following Literature Review
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Gene
446520 | aar2.L
Type: gene
Organism: frog, African clawed
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UniProt Feature
UniProt Feature
Begin: 1
Description: Protein AAR2 homolog
Type: chain
End: 384
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Allele
Aar2<+> | MGI:5433486
 
Name: AAR2 splicing factor homolog; wild type
Allele Type: Not Specified
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Allele
Aar2<Gt(XH236)Byg> | MGI:4125605
 
Name: AAR2 splicing factor homolog; gene trap XH236, BayGenomics
Allele Type: Gene trapped
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Allele
Aar2<Gt(RRF338)Byg> | MGI:4127706
 
Name: AAR2 splicing factor homolog; gene trap RRF338, BayGenomics
Allele Type: Gene trapped
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Allele
Aar2<Gt(RRF064)Byg> | MGI:4127915
 
Name: AAR2 splicing factor homolog; gene trap RRF064, BayGenomics
Allele Type: Gene trapped
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Allele
Aar2<Gt(OST305303)Lex> | MGI:4273065
 
Name: AAR2 splicing factor homolog; gene trap OST305303, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Aar2<Gt(OST423398)Lex> | MGI:4312253
 
Name: AAR2 splicing factor homolog; gene trap OST423398, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Aar2<Gt(RRR698)Byg> | MGI:4330441
 
Name: AAR2 splicing factor homolog; gene trap RRR698, BayGenomics
Allele Type: Gene trapped
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Allele
Aar2<Gt(AE0910)Wtsi> | MGI:3868365
 
Name: AAR2 splicing factor homolog; gene trap AE0910, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
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Allele
Aar2<Gt(AE0909)Wtsi> | MGI:4338171
 
Name: AAR2 splicing factor homolog; gene trap AE0909, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
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Allele
Aar2<Gt(EUCE0247g09)Hmgu> | MGI:4373249
 
Name: AAR2 splicing factor homolog; gene trap EUCE0247g09, Helmholtz Zentrum Muenchen GmbH
Allele Type: Gene trapped
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Allele
Aar2<Gt(EUCE0234f05)Hmgu> | MGI:4387747
 
Name: AAR2 splicing factor homolog; gene trap EUCE0234f05, Helmholtz Zentrum Muenchen GmbH
Allele Type: Gene trapped
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Allele
Aar2<Gt(IST14029G2)Tigm> | MGI:5207311
 
Name: AAR2 splicing factor homolog; gene trap IST14029G2, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
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Protein Domain
IPR038516 | AAR2_N_sf
Type: Homologous_superfamily
Description: Aar2 is a U5 small nuclear ribonucleoprotein (snRNP) particle assembly factor and part of Prp8, which forms a large complex containing U5 snRNA, Snu114, and seven Sm proteins (B, D1, D2, D3, E, F and G). Upon import of the complex into the nucleus, Aar2 phosphorylation leads to its release from Prp8 and replacement by Brr2p, thus playing an important role in Brr2p regulation and possibly safeguarding against non-specific RNA binding to Prp8 [, , , , ]. Aar2p binds directly with the RNaseH-like domain in the C-terminal region of Prp8p []. In yeast, Aar2 protein is involved in splicing pre-mRNA of the a1 cistron and other genes important for cell growth [].This entry consists of the N-terminal domain of eukaryotic Aar2 and Aar2-like proteins.
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Protein Domain
IPR038514 | AAR2_C_sf
Type: Homologous_superfamily
Description: Aar2 is a U5 small nuclear ribonucleoprotein (snRNP) particle assembly factor and part of Prp8, which forms a large complex containing U5 snRNA, Snu114, and seven Sm proteins (B, D1, D2, D3, E, F and G). Upon import of the complex into the nucleus, Aar2 phosphorylation leads to its release from Prp8 and replacement by Brr2p, thus playing an important role in Brr2p regulation and possibly safeguarding against non-specific RNA binding to Prp8 [, , , , ]. Aar2p binds directly with the RNaseH-like domain in the C-terminal region of Prp8p []. In yeast, Aar2 protein is involved in splicing pre-mRNA of the a1 cistron and other genes important for cell growth [].This entry consists of the C-terminal domain of eukaryotic Aar2 and Aar2-like proteins. This domain consists of 9 alpha helices, 1 pi helix and 1 3(10)-helix.
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Publication
21764848 | -
First Author: Weber G
Year: 2011
Journal: Genes Dev
Title: Mechanism for Aar2p function as a U5 snRNP assembly factor.
Volume: 25
Issue: 15
Pages: 1601-12
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Publication
23354046 | -
First Author: Galej WP
Year: 2013
Journal: Nature
Title: Crystal structure of Prp8 reveals active site cavity of the spliceosome.
Volume: 493
Issue: 7434
Pages: 638-43
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Publication
21828266 | -
First Author: Valadkhan S
Year: 2011
Journal: Genes Dev
Title: A snRNP's ordered path to maturity.
Volume: 25
Issue: 15
Pages: 1563-7
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Publication
11720285 | -
First Author: Gottschalk A
Year: 2001
Journal: RNA
Title: The yeast U5 snRNP coisolated with the U1 snRNP has an unexpected protein composition and includes the splicing factor Aar2p.
Volume: 7
Issue: 11
Pages: 1554-65
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Publication
16373487 | -
First Author: Boon KL
Year: 2006
Journal: RNA
Title: Prp8p dissection reveals domain structure and protein interaction sites.
Volume: 12
Issue: 2
Pages: 198-205
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Publication
17934474 | -
First Author: Boon KL
Year: 2007
Journal: Nat Struct Mol Biol
Title: prp8 mutations that cause human retinitis pigmentosa lead to a U5 snRNP maturation defect in yeast.
Volume: 14
Issue: 11
Pages: 1077-83
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Protein Domain
IPR033648 | AAR2_C
Type: Domain
Description: This entry consists of the C-terminal domain of eukaryotic Aar2 and Aar2-like proteins. This domain consists of 9 alpha helices, 1 pi helix and 1 3(10)-helix.Aar2 is a U5 small nuclear ribonucleoprotein (snRNP) particle assembly factor and part of Prp8, which forms a large complex containing U5 snRNA, Snu114, and seven Sm proteins (B, D1, D2, D3, E, F and G). Upon import of the complex into the nucleus, Aar2 phosphorylation leads to its release from Prp8 and replacement by Brr2p, thus playing an important role in Brr2p regulation and possibly safeguarding against non-specific RNA binding to Prp8 [, , , , ]. Aar2p binds directly with the RNaseH-like domain in the C-terminal region of Prp8p []. In yeast, Aar2 protein is involved in splicing pre-mRNA of the a1 cistron and other genes important for cell growth [].
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Protein Domain
IPR033647 | Aar2_N
Type: Domain
Description: This entry consists of the N-terminal domain of eukaryotic Aar2 and Aar2-like proteins.Aar2 is a U5 small nuclear ribonucleoprotein (snRNP) particle assembly factor and part of Prp8, which forms a large complex containing U5 snRNA, Snu114, and seven Sm proteins (B, D1, D2, D3, E, F and G). Upon import of the complex into the nucleus, Aar2 phosphorylation leads to its release from Prp8 and replacement by Brr2p, thus playing an important role in Brr2p regulation and possibly safeguarding against non-specific RNA binding to Prp8 [, , , , ]. Aar2p binds directly with the RNaseH-like domain in the C-terminal region of Prp8p []. In yeast, Aar2 protein is involved in splicing pre-mRNA of the a1 cistron and other genes important for cell growth [].
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Publication
11042159 | J:68323
First Author: Carninci P
Year: 2000
Journal: Genome Res
Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.
Volume: 10
Issue: 10
Pages: 1617-30
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Publication
10349636 | J:80645
 
First Author: Carninci P
Year: 1999
Journal: Methods Enzymol
Title: High-efficiency full-length cDNA cloning.
Volume: 303
Pages: 19-44
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Publication
11076861 | J:68324
First Author: Shibata K
Year: 2000
Journal: Genome Res
Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
Volume: 10
Issue: 11
Pages: 1757-71
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Publication
16141073 | -
First Author: Katayama S
Year: 2005
Journal: Science
Title: Antisense transcription in the mammalian transcriptome.
Volume: 309
Issue: 5740
Pages: 1564-6
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

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