Type |
Details |
Score |
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Phospholipid-transporting ATPase IC (also known as ATP8B1 or ATPIC) belongs to subfamily IV of the P-type ATPases family, whose members transport phospholipids across the membrane. ATP8B1 can bind either CDC50A or CDC50B as its accessory protein for endoplasmic reticulum exit and plasma membrane lipid flippase activity [, , ].In hepatocytes, ATP8B1 localises in the canalicular membrane, where it may maintain the membrane integrity and to the function of ABCB4, an ABC floppase that play a role in bile export []. In the epithelial Caco-2 cells, ATP8B1 is required for apical protein expression and microvillus formation in polarised epithelial cells []. Mutations in ATP8B1 cause two forms of intrahepatic cholestasis, progressive familial intrahepatic cholestasis (PFIC) and benign recurrent intrahepatic cholestasis (BFIC) []. It is involved in the correct apical membrane localization of CDC42, CFTR and SLC10A2 []. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
van der Mark VA |
Year: |
2016 |
Journal: |
Biochim Biophys Acta |
Title: |
The phospholipid flippase ATP8B1 mediates apical localization of the cystic fibrosis transmembrane regulator. |
Volume: |
1863 |
Issue: |
9 |
Pages: |
2280-8 |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Publication |
First Author: |
Stapelbroek JM |
Year: |
2009 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
ATP8B1 is essential for maintaining normal hearing. |
Volume: |
106 |
Issue: |
24 |
Pages: |
9709-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Groen A |
Year: |
2011 |
Journal: |
Gastroenterology |
Title: |
Complementary functions of the flippase ATP8B1 and the floppase ABCB4 in maintaining canalicular membrane integrity. |
Volume: |
141 |
Issue: |
5 |
Pages: |
1927-37.e1-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Paulusma CC |
Year: |
2008 |
Journal: |
Hepatology |
Title: |
ATP8B1 requires an accessory protein for endoplasmic reticulum exit and plasma membrane lipid flippase activity. |
Volume: |
47 |
Issue: |
1 |
Pages: |
268-78 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tamura R |
Year: |
2023 |
Journal: |
Nat Commun |
Title: |
Intestinal Atp8b1 dysfunction causes hepatic choline deficiency and steatohepatitis. |
Volume: |
14 |
Issue: |
1 |
Pages: |
6763 |
|
•
•
•
•
•
|
Publication |
First Author: |
Soundararajan R |
Year: |
2016 |
Journal: |
Aging (Albany NY) |
Title: |
Global gene profiling of aging lungs in Atp8b1 mutant mice. |
Volume: |
8 |
Issue: |
9 |
Pages: |
2232-2252 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1251
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Fukumoto J |
Year: |
2019 |
Journal: |
Aging (Albany NY) |
Title: |
Oxidative stress induces club cell proliferation and pulmonary fibrosis in Atp8b1 mutant mice. |
Volume: |
11 |
Issue: |
1 |
Pages: |
209-229 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ray NB |
Year: |
2010 |
Journal: |
Nat Med |
Title: |
Dynamic regulation of cardiolipin by the lipid pump Atp8b1 determines the severity of lung injury in experimental pneumonia. |
Volume: |
16 |
Issue: |
10 |
Pages: |
1120-1127 |
|
•
•
•
•
•
|
Publication |
First Author: |
Paulusma CC |
Year: |
2006 |
Journal: |
Hepatology |
Title: |
Atp8b1 deficiency in mice reduces resistance of the canalicular membrane to hydrophobic bile salts and impairs bile salt transport. |
Volume: |
44 |
Issue: |
1 |
Pages: |
195-204 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pawlikowska L |
Year: |
2004 |
Journal: |
Hum Mol Genet |
Title: |
A mouse genetic model for familial cholestasis caused by ATP8B1 mutations reveals perturbed bile salt homeostasis but no impairment in bile secretion. |
Volume: |
13 |
Issue: |
8 |
Pages: |
881-92 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
103
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Bull LN |
Year: |
1998 |
Journal: |
Nat Genet |
Title: |
A gene encoding a P-type ATPase mutated in two forms of hereditary cholestasis. |
Volume: |
18 |
Issue: |
3 |
Pages: |
219-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Verhulst PM |
Year: |
2010 |
Journal: |
Hepatology |
Title: |
A flippase-independent function of ATP8B1, the protein affected in familial intrahepatic cholestasis type 1, is required for apical protein expression and microvillus formation in polarized epithelial cells. |
Volume: |
51 |
Issue: |
6 |
Pages: |
2049-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bryde S |
Year: |
2010 |
Journal: |
J Biol Chem |
Title: |
CDC50 proteins are critical components of the human class-1 P4-ATPase transport machinery. |
Volume: |
285 |
Issue: |
52 |
Pages: |
40562-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
van der Velden LM |
Year: |
2010 |
Journal: |
J Biol Chem |
Title: |
Heteromeric interactions required for abundance and subcellular localization of human CDC50 proteins and class 1 P4-ATPases. |
Volume: |
285 |
Issue: |
51 |
Pages: |
40088-96 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
245
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Westermann-Clark E |
Year: |
2022 |
Journal: |
Biomolecules |
Title: |
Matrix Metalloproteinase 7 Expression and Apical Epithelial Defects in Atp8b1 Mutant Mouse Model of Pulmonary Fibrosis. |
Volume: |
12 |
Issue: |
2 |
|
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Publication |
First Author: |
Shah S |
Year: |
2010 |
Journal: |
PLoS One |
Title: |
Strain background modifies phenotypes in the ATP8B1-deficient mouse. |
Volume: |
5 |
Issue: |
2 |
Pages: |
e8984 |
|
•
•
•
•
•
|
Publication |
First Author: |
Langedijk J |
Year: |
2021 |
Journal: |
Sci Rep |
Title: |
Reduced spontaneous itch in mouse models of cholestasis. |
Volume: |
11 |
Issue: |
1 |
Pages: |
6127 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bruurs LJ |
Year: |
2015 |
Journal: |
J Cell Biol |
Title: |
ATP8B1-mediated spatial organization of Cdc42 signaling maintains singularity during enterocyte polarization. |
Volume: |
210 |
Issue: |
7 |
Pages: |
1055-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang WJ |
Year: |
2022 |
Journal: |
Cell Death Dis |
Title: |
Acinar ATP8b1/LPC pathway promotes macrophage efferocytosis and clearance of inflammation during chronic pancreatitis development. |
Volume: |
13 |
Issue: |
10 |
Pages: |
893 |
|
•
•
•
•
•
|
Publication |
First Author: |
Paulusma CC |
Year: |
2009 |
Journal: |
J Biol Chem |
Title: |
Activity of the bile salt export pump (ABCB11) is critically dependent on canalicular membrane cholesterol content. |
Volume: |
284 |
Issue: |
15 |
Pages: |
9947-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Groen A |
Year: |
2008 |
Journal: |
Gastroenterology |
Title: |
Abcg5/8 independent biliary cholesterol excretion in Atp8b1-deficient mice. |
Volume: |
134 |
Issue: |
7 |
Pages: |
2091-100 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
Publication |
First Author: |
Muñoz-MartÃnez F |
Year: |
2010 |
Journal: |
Biochem Pharmacol |
Title: |
CDC50A plays a key role in the uptake of the anticancer drug perifosine in human carcinoma cells. |
Volume: |
80 |
Issue: |
6 |
Pages: |
793-800 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bolier R |
Year: |
2016 |
Journal: |
Biochim Biophys Acta |
Title: |
Enteroendocrine cells are a potential source of serum autotaxin in men. |
Volume: |
1862 |
Issue: |
4 |
Pages: |
696-704 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hohenester S |
Year: |
2020 |
Journal: |
Cells |
Title: |
Glycochenodeoxycholate Promotes Liver Fibrosis in Mice with Hepatocellular Cholestasis. |
Volume: |
9 |
Issue: |
2 |
|
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1666528 |
|
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
|
Specimen Label: |
Table 1 P7 |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1666525 |
|
Stage: |
TS25 |
Assay Id: |
MGI:4359077 |
Age: |
embryonic day 17.0 |
|
|
Specimen Label: |
Table 1 E17.5 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
|
Specimen Label: |
Table 1 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:3290628 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
|
Specimen Label: |
Table 1 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1647028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
|
Specimen Label: |
Table 1 P7 |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1647025 |
|
Stage: |
TS25 |
Assay Id: |
MGI:4359077 |
Age: |
embryonic day 17.0 |
|
|
Specimen Label: |
Table 1 E17.5 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1842625 |
Pattern: |
Not Specified |
Stage: |
TS25 |
Assay Id: |
MGI:4359077 |
Age: |
embryonic day 17.0 |
|
|
Specimen Label: |
Table 1 E17.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1842628 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
|
Specimen Label: |
Table 1 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684625 |
Pattern: |
Not Specified |
Stage: |
TS25 |
Assay Id: |
MGI:4359077 |
Age: |
embryonic day 17.0 |
|
|
Specimen Label: |
Table 1 E17.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684628 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
|
Specimen Label: |
Table 1 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1893928 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
Note: |
Expression is in the crypts. |
Specimen Label: |
5A |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1775128 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
|
Specimen Label: |
Table 1 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:4359077 |
Age: |
postnatal day 7 |
|
Note: |
Especially in colonic crypts. |
Specimen Label: |
Table 1 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4358970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-09-24 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287325 |
Pattern: |
Not Specified |
Stage: |
TS25 |
Assay Id: |
MGI:4359077 |
Age: |
embryonic day 17.0 |
|
|
Specimen Label: |
Table 1 E17.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Marra M |
Year: |
1997 |
Journal: |
GenBank Submission |
Title: |
mx20g12.r1 Soares mouse NML Mus musculus cDNA clone IMAGE: 680806 5', mRNA sequence |
|
|
Pages: |
AA242626 |
|
•
•
•
•
•
|
Publication |
First Author: |
Slijepcevic D |
Year: |
2018 |
Journal: |
Hepatology |
Title: |
Na+ -taurocholate cotransporting polypeptide inhibition has hepatoprotective effects in cholestasis in mice. |
Volume: |
68 |
Issue: |
3 |
Pages: |
1057-1069 |
|
•
•
•
•
•
|
Publication |
First Author: |
Marra M |
Year: |
1998 |
Journal: |
GenBank Submission |
Title: |
vy11g09.r1 Stratagene mouse macrophage (#937306) Mus musculus cDNA clone IMAGE:1295200 5' similar to SW:ATC_YEAST p39524 PROBABLE CALCIUM-TRANSPORTING ATPASE 3;, mRNA sequence |
|
|
Pages: |
AA896217 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kunne C |
Year: |
2014 |
Journal: |
Lab Invest |
Title: |
Hepatic cytochrome P450 deficiency in mouse models for intrahepatic cholestasis predispose to bile salt-induced cholestasis. |
Volume: |
94 |
Issue: |
10 |
Pages: |
1103-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Halleck MS |
Year: |
1999 |
Journal: |
Physiol Genomics |
Title: |
Differential expression of putative transbilayer amphipath transporters. |
Volume: |
1 |
Issue: |
3 |
Pages: |
139-50 |
|
•
•
•
•
•
|
Publication |
First Author: |
Street VA |
Year: |
2014 |
Journal: |
J Assoc Res Otolaryngol |
Title: |
Resistance to noise-induced hearing loss in 129S6 and MOLF mice: identification of independent, overlapping, and interacting chromosomal regions. |
Volume: |
15 |
Issue: |
5 |
Pages: |
721-38 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lammert F |
Year: |
2001 |
Journal: |
Gastroenterology |
Title: |
Chromosomal organization of candidate genes involved in cholesterol gallstone formation: a murine gallstone map. |
Volume: |
120 |
Issue: |
1 |
Pages: |
221-38 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGI and IMPC |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GO Central curators, GOA curators, Rhea curators |
Year: |
2020 |
|
Title: |
Automatic Gene Ontology annotation based on Rhea mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Mouse Synonym Curation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|