| Type |
Details |
Score |
| Gene |
| Type: |
gene |
| Organism: |
human |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
frog, western clawed |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1763117 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2009-01-15 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1750322 |
|
| Stage: |
TS22 |
| Assay Id: |
MGI:3825793 |
| Age: |
embryonic day 14.5 |
| Image: |
Additional file 4 Cald1 |
|
| Specimen Label: |
Additional file 4 Cald1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jang SM |
| Year: |
2013 |
| Journal: |
J Cell Sci |
| Title: |
Sox4-mediated caldesmon expression facilitates differentiation of skeletal myoblasts. |
| Volume: |
126 |
| Issue: |
Pt 22 |
| Pages: |
5178-88 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus caroli |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Deng M |
| Year: |
2013 |
| Journal: |
Am J Physiol Renal Physiol |
| Title: |
Amino acid mutations in the caldesmon COOH-terminal functional domain increase force generation in bladder smooth muscle. |
| Volume: |
305 |
| Issue: |
10 |
| Pages: |
F1455-65 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Guo H |
| Year: |
2005 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
Specific disruption of smooth muscle caldesmon expression in mice. |
| Volume: |
330 |
| Issue: |
4 |
| Pages: |
1132-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Guo H |
| Year: |
2013 |
| Journal: |
Pflugers Arch |
| Title: |
Ablation of smooth muscle caldesmon affects the relaxation kinetics of arterial muscle. |
| Volume: |
465 |
| Issue: |
2 |
| Pages: |
283-94 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Walker G |
| Year: |
1989 |
| Journal: |
J Biol Chem |
| Title: |
The role of caldesmon in the regulation of receptor capping in mouse T-lymphoma cell. |
| Volume: |
264 |
| Issue: |
1 |
| Pages: |
496-500 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:3102528 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:3816451 |
| Age: |
postnatal |
|
|
| Specimen Label: |
Metaphase II |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:360422 |
|
| Stage: |
TS02 |
| Assay Id: |
MGI:3816451 |
| Age: |
embryonic day 1.5 |
|
|
| Specimen Label: |
2-cell embryo |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:360433 |
|
| Stage: |
TS03 |
| Assay Id: |
MGI:3816451 |
| Age: |
embryonic day 2.0 |
|
|
| Specimen Label: |
4-cell embryo |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:360443 |
|
| Stage: |
TS03 |
| Assay Id: |
MGI:3816451 |
| Age: |
embryonic day 2.5 |
|
|
| Specimen Label: |
8-cell embryo |
| Detected: |
false |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:360453 |
|
| Stage: |
TS03 |
| Assay Id: |
MGI:3816451 |
| Age: |
embryonic day 3.0 |
|
|
| Specimen Label: |
Morula |
| Detected: |
false |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:360464 |
|
| Stage: |
TS04 |
| Assay Id: |
MGI:3816451 |
| Age: |
embryonic day 3.5 |
|
|
| Specimen Label: |
E3.5 blastocyst |
| Detected: |
false |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:360465 |
|
| Stage: |
TS05 |
| Assay Id: |
MGI:3816451 |
| Age: |
embryonic day 4.5 |
|
|
| Specimen Label: |
E4.5 blastocyst |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3815647 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2008-11-20 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:160415 |
|
| Stage: |
TS05 |
| Assay Id: |
MGI:3816451 |
| Age: |
embryonic day 4.5 |
|
|
| Specimen Label: |
E4.5 inner cell mass |
| Detected: |
false |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6444194 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2020-07-28 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716828 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6445539 |
| Age: |
postnatal week 5 |
|
|
| Specimen Label: |
wild type control |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6444194 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2020-07-28 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716828 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6445539 |
| Age: |
postnatal week 5 |
|
|
| Specimen Label: |
miR-183C |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7284445 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2022-06-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1610524 |
|
| Stage: |
TS24 |
| Assay Id: |
MGI:7284692 |
| Age: |
embryonic day 16.5 |
|
|
| Specimen Label: |
WT |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7284445 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2022-06-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1610524 |
|
| Stage: |
TS24 |
| Assay Id: |
MGI:7284692 |
| Age: |
embryonic day 16.5 |
|
|
| Specimen Label: |
DKO |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7736316 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2024-10-08 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1761324 |
| Pattern: |
Regionally restricted |
| Stage: |
TS24 |
| Assay Id: |
MGI:7736361 |
| Age: |
embryonic day 16.5 |
|
| Note: |
A segment of the arch (actin-negative cells) which lacked expression in its outer media cell layers was shown, in contrast to more up- and downstream regions. Expressed in the most cells expressing smooth muscle-specific proteins. Lower levels of expression were visible in the entire B-segment of the aorta, marked a more extensive area than the distinct ring of actin-indigent cells. |
| Specimen Label: |
4f |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7736316 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2024-10-08 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1761327 |
| Pattern: |
Regionally restricted |
| Stage: |
TS27 |
| Assay Id: |
MGI:7736361 |
| Age: |
postnatal newborn |
|
| Note: |
Lower levels of expression were visible in the entire B-segment of the aorta, marked a more extensive area than the distinct ring of actin-indigent cells. |
| Specimen Label: |
not shown |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3145361 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2009-01-23 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603911 |
| Pattern: |
Not Specified |
| Stage: |
TS11 |
| Assay Id: |
MGI:3828591 |
| Age: |
embryonic day 7.5 |
|
| Note: |
Expression is weak to non-existent. |
| Specimen Label: |
E7.5 |
|
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3145361 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2009-01-23 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603913 |
| Pattern: |
Not Specified |
| Stage: |
TS13 |
| Assay Id: |
MGI:3828591 |
| Age: |
embryonic day 8.5 |
|
| Note: |
Expression is weak to non-existent. |
| Specimen Label: |
E8.5 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1763117 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2019-12-13 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3806722 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:6380660 |
| Age: |
embryonic day 14.5 |
| Image: |
1A9 |
|
| Specimen Label: |
1A9 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ryan AM |
| Year: |
1997 |
| Journal: |
Anim Genet |
| Title: |
Chromosomal assignment of six muscle-specific genes in cattle. |
| Volume: |
28 |
| Issue: |
2 |
| Pages: |
84-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mukhopadhyay UK |
| Year: |
2009 |
| Journal: |
Mol Cell Biol |
| Title: |
p53 suppresses Src-induced podosome and rosette formation and cellular invasiveness through the upregulation of caldesmon. |
| Volume: |
29 |
| Issue: |
11 |
| Pages: |
3088-98 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bergwerff M |
| Year: |
1999 |
| Journal: |
Cardiovasc Res |
| Title: |
Unique vascular morphology of the fourth aortic arches: possible implications for pathogenesis of type-B aortic arch interruption and anomalous right subclavian artery. |
| Volume: |
44 |
| Issue: |
1 |
| Pages: |
185-96 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mahendrasingam S |
| Year: |
2011 |
| Journal: |
J Histochem Cytochem |
| Title: |
Subcellular distribution and relative expression of fibrocyte markers in the CD/1 mouse cochlea assessed by semiquantitative immunogold electron microscopy. |
| Volume: |
59 |
| Issue: |
11 |
| Pages: |
984-1000 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yamada H |
| Year: |
1999 |
| Journal: |
Hypertension |
| Title: |
AT2 receptor and vascular smooth muscle cell differentiation in vascular development. |
| Volume: |
33 |
| Issue: |
6 |
| Pages: |
1414-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Boettger T |
| Year: |
2009 |
| Journal: |
J Clin Invest |
| Title: |
Acquisition of the contractile phenotype by murine arterial smooth muscle cells depends on the Mir143/145 gene cluster. |
| Volume: |
119 |
| Issue: |
9 |
| Pages: |
2634-47 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bianchi-Smiraglia A |
| Year: |
2013 |
| Journal: |
Cell Cycle |
| Title: |
Integrin-β5 and zyxin mediate formation of ventral stress fibers in response to transforming growth factor β. |
| Volume: |
12 |
| Issue: |
21 |
| Pages: |
3377-89 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li J |
| Year: |
2006 |
| Journal: |
Differentiation |
| Title: |
Serum response factor, its cofactors, and epithelial-mesenchymal signaling in urinary bladder smooth muscle formation. |
| Volume: |
74 |
| Issue: |
1 |
| Pages: |
30-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jia X |
| Year: |
2018 |
| Journal: |
FASEB J |
| Title: |
Loss of sonic hedgehog gene leads to muscle development disorder and megaesophagus in mice. |
| Volume: |
32 |
| Issue: |
10 |
| Pages: |
5703-5715 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carvalho RL |
| Year: |
2004 |
| Journal: |
Development |
| Title: |
Defective paracrine signalling by TGFbeta in yolk sac vasculature of endoglin mutant mice: a paradigm for hereditary haemorrhagic telangiectasia. |
| Volume: |
131 |
| Issue: |
24 |
| Pages: |
6237-47 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jeanes A |
| Year: |
2005 |
| Journal: |
Reproduction |
| Title: |
Evaluation of candidate markers for the peritubular myoid cell lineage in the developing mouse testis. |
| Volume: |
130 |
| Issue: |
4 |
| Pages: |
509-16 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Trivedi CM |
| Year: |
2010 |
| Journal: |
Dev Cell |
| Title: |
Hopx and Hdac2 interact to modulate Gata4 acetylation and embryonic cardiac myocyte proliferation. |
| Volume: |
19 |
| Issue: |
3 |
| Pages: |
450-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Liu N |
| Year: |
2008 |
| Journal: |
Genes Dev |
| Title: |
microRNA-133a regulates cardiomyocyte proliferation and suppresses smooth muscle gene expression in the heart. |
| Volume: |
22 |
| Issue: |
23 |
| Pages: |
3242-54 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
de Groot NE |
| Year: |
2020 |
| Journal: |
Sci Rep |
| Title: |
Heterozygous loss of Rbm24 in the adult mouse heart increases sarcomere slack length but does not affect function. |
| Volume: |
10 |
| Issue: |
1 |
| Pages: |
7687 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Godin P |
| Year: |
2020 |
| Journal: |
Reproduction |
| Title: |
YAP and TAZ are required for the postnatal development and the maintenance of the structural integrity of the oviduct. |
| Volume: |
160 |
| Issue: |
2 |
| Pages: |
307-318 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Copeland NG |
| Year: |
1993 |
| Journal: |
Science |
| Title: |
A genetic linkage map of the mouse: current applications and future prospects. |
| Volume: |
262 |
| Issue: |
5130 |
| Pages: |
57-66 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
The UK Mouse Genome Centre European Consortium |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
European Consortium EST Radiation Hybrid Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Abou Nader N |
| Year: |
2022 |
| Journal: |
Int J Mol Sci |
| Title: |
Targeted Disruption of Lats1 and Lats2 in Mice Impairs Testis Development and Alters Somatic Cell Fate. |
| Volume: |
23 |
| Issue: |
21 |
|
|
•
•
•
•
•
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