| Type |
Details |
Score |
| Gene |
| Type: |
gene |
| Organism: |
human |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
frog, western clawed |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This entry includes cleft lip and palate transmembrane protein 1 (CLPTM1) and cleft lip and palate transmembrane protein 1-like protein (CLPTM1L, also known as CRR9). This entry also includes uncharacterised proteins from fungi and plants. Clefts of the lip and/or palate (CL/P) are some of the most common birth defects. They may be categorised into syndromic or non-syndromic types, with syndromic defects having an underlying chromosomal or teratogenic cause. Around 70% of clefts are non-syndromic and individuals have no typical physical or developmental abnormalities; these clefts generally show polygenetic behaviour and complex inheritance []. Studies have identified regions on chromosomes 19 and 11 which may be involved in non-syndromic cleft lip and palates; this included a novel gene on chromosome 19, cleft lip and palate-associated transmembrane protein 1 (CLPTM1) []. The Poliovirus receptor-related 1 gene (PVRL1), which is located on chromosome 11, has also been shown to associate with non-syndromic cleft lip and palates [, ].Human CLPTM1L is a scramblase that mediates the translocation glucosaminylphosphatidylinositol (alpha-D-GlcN-1-6-(1,2-diacyl-sn-glycero-3-phospho)-1D-myo-inositol, GlcN-PI) across the endoplasmic reticulum (ER) membrane, from the cytosolic leaflet to the luminal leaflet of the ER membrane, where it participates in the biosynthesis of glycosylphosphatidylinositol (GPI) []. It protects non-small cell lung cancer tumour cells from genotoxic apoptosis and may contribute to lung cancer risk [, ]. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yoshiura K |
| Year: |
1998 |
| Journal: |
Genomics |
| Title: |
Characterization of a novel gene disrupted by a balanced chromosomal translocation t(2;19)(q11.2;q13.3) in a family with cleft lip and palate. |
| Volume: |
54 |
| Issue: |
2 |
| Pages: |
231-40 |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
human |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ge Y |
| Year: |
2018 |
| Journal: |
Neuron |
| Title: |
Clptm1 Limits Forward Trafficking of GABAA Receptors to Scale Inhibitory Synaptic Strength. |
| Volume: |
97 |
| Issue: |
3 |
| Pages: |
596-610.e8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ge Y |
| Year: |
2024 |
| Journal: |
J Neurosci |
| Title: |
Haploinsufficiency of GABA(A) Receptor-Associated Clptm1 Enhances Phasic and Tonic Inhibitory Neurotransmission, Suppresses Excitatory Synaptic Plasticity, and Impairs Memory. |
| Volume: |
44 |
| Issue: |
32 |
|
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
539
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
664
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Turhani D |
| Year: |
2005 |
| Journal: |
J Craniomaxillofac Surg |
| Title: |
Mutation analysis of CLPTM 1 and PVRL 1 genes in patients with non-syndromic clefts of lip, alveolus and palate. |
| Volume: |
33 |
| Issue: |
5 |
| Pages: |
301-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Sözen MA |
| Year: |
2001 |
| Journal: |
Nat Genet |
| Title: |
Mutation of PVRL1 is associated with sporadic, non-syndromic cleft lip/palate in northern Venezuela. |
| Volume: |
29 |
| Issue: |
2 |
| Pages: |
141-2 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Sözen MA |
| Year: |
2009 |
| Journal: |
Genet Test Mol Biomarkers |
| Title: |
Mutation analysis of the PVRL1 gene in caucasians with nonsyndromic cleft lip/palate. |
| Volume: |
13 |
| Issue: |
5 |
| Pages: |
617-21 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
James MA |
| Year: |
2014 |
| Journal: |
Cancer Res |
| Title: |
CRR9/CLPTM1L regulates cell survival signaling and is required for Ras transformation and lung tumorigenesis. |
| Volume: |
74 |
| Issue: |
4 |
| Pages: |
1116-27 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
James MA |
| Year: |
2012 |
| Journal: |
PLoS One |
| Title: |
Functional characterization of CLPTM1L as a lung cancer risk candidate gene in the 5p15.33 locus. |
| Volume: |
7 |
| Issue: |
6 |
| Pages: |
e36116 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang Y |
| Year: |
2022 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Genome-wide CRISPR screen reveals CLPTM1L as a lipid scramblase required for efficient glycosylphosphatidylinositol biosynthesis. |
| Volume: |
119 |
| Issue: |
14 |
| Pages: |
e2115083119 |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus caroli |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Takeuchi T |
| Year: |
1997 |
| Journal: |
J Immunol |
| Title: |
Transgenic expression of a novel thymic epithelial cell antigen stimulates abberant development of thymocytes. |
| Volume: |
159 |
| Issue: |
2 |
| Pages: |
726-33 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Takeuchi T |
| Year: |
1995 |
| Journal: |
Int Immunol |
| Title: |
Characterization of a 50 kDa surface membrane protein on thymic stromal cells as an important factor for early T cell development. |
| Volume: |
7 |
| Issue: |
4 |
| Pages: |
583-90 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Miyazawa H |
| Year: |
1999 |
| Journal: |
Biochim Biophys Acta |
| Title: |
Structure and promoter region of the surface membrane protein HS9 gene expressed on the thymic epithelial cells. |
| Volume: |
1444 |
| Issue: |
3 |
| Pages: |
407-11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689426 |
|
| Stage: |
TS26 |
| Assay Id: |
MGI:7780051 |
| Age: |
embryonic day 18.0 |
| Image: |
1 |
|
| Specimen Label: |
WT |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689426 |
|
| Stage: |
TS26 |
| Assay Id: |
MGI:7780051 |
| Age: |
embryonic day 18.0 |
| Image: |
1 |
|
| Specimen Label: |
KOfirst/KOfirst |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689426 |
|
| Stage: |
TS26 |
| Assay Id: |
MGI:7780051 |
| Age: |
embryonic day 18.0 |
| Image: |
1 |
|
| Specimen Label: |
KOfirst/+ |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689427 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:7780052 |
| Age: |
postnatal day 1 |
| Image: |
5 |
|
| Specimen Label: |
P1 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7780052 |
| Age: |
postnatal day 7 |
| Image: |
5 |
|
| Specimen Label: |
P7 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7780052 |
| Age: |
postnatal day 14 |
| Image: |
5 |
|
| Specimen Label: |
P14 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7780052 |
| Age: |
postnatal day 21 |
| Image: |
5 |
|
| Specimen Label: |
P21 |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7780046 |
| Assay Type: |
Western blot |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7780052 |
| Age: |
postnatal day 42 |
| Image: |
5 |
|
| Specimen Label: |
P42 |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3558828 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1F |
| Note: |
Particularly high expression in olfactory bulb, cortical layers, hippocampus and striatum. |
| Specimen Label: |
1F |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754928 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1F |
| Note: |
Particularly high expression in olfactory bulb, cortical layers, hippocampus and striatum. |
| Specimen Label: |
1F |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3807489 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2008-09-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3552328 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:3807523 |
| Age: |
postnatal adult |
|
| Note: |
Expression is in lymph node cells in the outer cortex. |
| Specimen Label: |
3E |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3276828 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1G |
| Note: |
Expression in pyramidal cells and interneurons. |
| Specimen Label: |
1G |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3276828 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1G |
| Note: |
Expression in pyramidal cells and interneurons. |
| Specimen Label: |
1G |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1778728 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1F |
| Note: |
High expression in Purkinje cells. |
| Specimen Label: |
1F |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3807489 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2008-09-24 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1752322 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:3807503 |
| Age: |
embryonic day 14.0 |
|
| Note: |
Expression is in stromal cells. |
| Specimen Label: |
2A |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3284528 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1F |
| Note: |
Particularly high expression in olfactory bulb, cortical layers, hippocampus and striatum. |
| Specimen Label: |
1F |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3807489 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2008-09-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1930628 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:3807503 |
| Age: |
postnatal week 5 |
|
| Note: |
Expression is in the subcapsular area. |
| Specimen Label: |
2C |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3807489 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2008-09-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1930628 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:3807523 |
| Age: |
postnatal adult |
|
| Note: |
Expression is in the subcapsular area. |
| Specimen Label: |
3A |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3807489 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2008-09-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3580928 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:3807523 |
| Age: |
postnatal adult |
|
| Note: |
Expression is in white pulp lymphocytes outside the periarteriolar sheath. |
| Specimen Label: |
3C |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280928 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1F |
| Note: |
Particularly high expression in olfactory bulb, cortical layers, hippocampus and striatum. |
| Specimen Label: |
1F |
| Detected: |
true |
| Specimen Num: |
1 |
|
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•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3798170 |
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2024-11-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Ubiquitous |
| Stage: |
TS28 |
| Assay Id: |
MGI:7780055 |
| Age: |
postnatal day 22 |
| Image: |
1F |
| Note: |
Ubiquitously expressed in brain. |
| Specimen Label: |
1F |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3807489 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2008-09-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3586328 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:3807503 |
| Age: |
postnatal week 5 |
|
| Note: |
Expression is in some outer cortex areas. |
| Specimen Label: |
2C |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3807489 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2008-09-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3586328 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3807523 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
3A |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Centre for Phenogenomics |
| Year: |
2022 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Direct Data Submission for The Centre for Phenogenomics Alleles. |
|
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•
•
•
•
•
|
| Publication |
| First Author: |
Mager J |
| Year: |
2019 |
| Journal: |
MGI Direct Data Submission |
| Title: |
A Catalog of Early Lethal KOMP Phenotypes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shanghai Model Organisms Center |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
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|
•
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•
•
•
|
| Publication |
| First Author: |
Araki K |
| Year: |
1999 |
| Journal: |
Cell Mol Biol (Noisy-le-grand) |
| Title: |
Exchangeable gene trap using the Cre/mutated lox system. |
| Volume: |
45 |
| Issue: |
5 |
| Pages: |
737-50 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Taniwaki T |
| Year: |
2005 |
| Journal: |
Dev Growth Differ |
| Title: |
Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. |
| Volume: |
47 |
| Issue: |
3 |
| Pages: |
163-72 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen J |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
| Volume: |
100 |
| Issue: |
17 |
| Pages: |
9918-22 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Function or Process or Component Unknown following Literature Review |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
31 |
| Issue: |
1 |
| Pages: |
278-81 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Velocigene |
| Year: |
2008 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wellcome Trust Sanger Institute |
| Year: |
2009 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
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•
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•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
1670-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2014 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Skarnes WC |
| Year: |
2011 |
| Journal: |
Nature |
| Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
| Volume: |
474 |
| Issue: |
7351 |
| Pages: |
337-42 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
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•
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