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Search results 1 to 100 out of 104 for Ddx11

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Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Gene
1663 | DDX11
Type: gene
Organism: human
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Gene
506293 | DDX11
Type: gene
Organism: cattle
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Gene
418144 | DDX11
Type: gene
Organism: chicken
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Gene
492353 | ddx11
Type: gene
Organism: zebrafish
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Gene
717040 | DDX11
Type: gene
Organism: macaque, rhesus
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Gene
493192 | ddx11
Type: gene
Organism: frog, western clawed
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Gene
316767 | Ddx11
Type: gene
Organism: rat
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Gene
486745 | DDX11
Type: gene
Organism: dog, domestic
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Gene
465368 | DDX11
Type: gene
Organism: chimpanzee
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Protein Coding Gene
MGI:2443590 | Ddx11
Type: protein_coding_gene
Organism: mouse, laboratory
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Gene
100506660 | DDX11-AS1
Type: gene
Organism: human
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Publication
17611414 | J:158490
First Author: Inoue A
Year: 2007
Journal: Cell Cycle
Title: Loss of ChlR1 helicase in mouse causes lethality due to the accumulation of aneuploid cells generated by cohesion defects and placental malformation.
Volume: 6
Issue: 13
Pages: 1646-54
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Publication
21854770 | J:178401
First Author: Inoue A
Year: 2011
Journal: Exp Cell Res
Title: Mammalian ChlR1 has a role in heterochromatin organization.
Volume: 317
Issue: 17
Pages: 2522-35
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Publication
22678773 | J:185600
First Author: Cota CD
Year: 2012
Journal: Dev Dyn
Title: The ENU-induced cetus mutation reveals an essential role of the DNA helicase DDX11 for mesoderm development during early mouse embryogenesis.
Volume: 241
Issue: 8
Pages: 1249-59
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Protein Coding Gene
MGP_CAROLIEiJ_G0021837 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0023986 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0023944 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0023913 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0023945 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0023709 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_2443590 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0024391 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0023191 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0023685 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0023813 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0023779 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0023895 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0023807 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0024435 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0022937 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0023257 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0020824 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0022748 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
 
Probe: MGI:5470546
Assay Type: RNA in situ
Annotation Date: 2013-03-29
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3568928
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:5470555
Age: embryonic day 8.5
Image: 9A
Specimen Label: 9A
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5470546
Assay Type: RNA in situ
Annotation Date: 2013-03-29
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603915
Pattern: Widespread
Stage: TS15
Assay Id: MGI:5470555
Age: embryonic day 9.5
Image: 9B
Specimen Label: 9B
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5470546
Assay Type: RNA in situ
Annotation Date: 2013-03-29
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603913
Pattern: Widespread
Stage: TS13
Assay Id: MGI:5470555
Age: embryonic day 8.5
Image: 9A
Specimen Label: 9A
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5470546
Assay Type: RNA in situ
Annotation Date: 2013-03-29
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603915
Pattern: Widespread
Stage: TS15
Assay Id: MGI:5470555
Age: embryonic day 9.5
Image: 9D
Specimen Label: 9D
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
Probe: MGI:5470546
Assay Type: RNA in situ
Annotation Date: 2013-03-29
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1608613
Pattern: Regionally restricted
Stage: TS13
Assay Id: MGI:5470555
Age: embryonic day 8.5
Image: 9C
Note: Expression was detected in the visceral endoderm layer of the yolk sac.
Specimen Label: 9C
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:5470546
Assay Type: RNA in situ
Annotation Date: 2013-03-29
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1610713
Pattern: Not Specified
Stage: TS13
Assay Id: MGI:5470555
Age: embryonic day 8.5
Image: 9A
Specimen Label: 9A
Detected: true
Specimen Num: 1
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Publication
15755804 | J:98216
First Author: García-García MJ
Year: 2005
Journal: Proc Natl Acad Sci U S A
Title: Analysis of mouse embryonic patterning and morphogenesis by forward genetics.
Volume: 102
Issue: 17
Pages: 5913-9
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Publication
- | J:66660
       
First Author: Mouse Genome Database and National Center for Biotechnology Information Editorial Staff Collaboration
Year: 2001
Title: LocusLink Collaboration
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Publication
- | J:342608
       
First Author: GO Central curators, GOA curators, Rhea curators
Year: 2020
Title: Automatic Gene Ontology annotation based on Rhea mapping
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Publication
- | J:84900
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Journal: Database Download
Title: Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Protein
Q80YC3
Organism: Mus musculus/domesticus
Length: 443  
Fragment?: true
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UniProt Feature
UniProt Feature
Begin: 1
Description: ATP-dependent DNA helicase DDX11
Type: chain
End: 906
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Publication
32855419 | J:300657
First Author: van Schie JJM
Year: 2020
Journal: Nat Commun
Title: Warsaw Breakage Syndrome associated DDX11 helicase resolves G-quadruplex structures to support sister chromatid cohesion.
Volume: 11
Issue: 1
Pages: 4287
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Protein
Q6AXC6
Organism: Mus musculus/domesticus
Length: 906  
Fragment?: false
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Protein
A0A2Y9CZM3
Organism: Mus musculus/domesticus
Length: 880  
Fragment?: false
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Protein
A0A286YCB9
Organism: Mus musculus/domesticus
Length: 168  
Fragment?: true
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Protein
A0A286YDY6
Organism: Mus musculus/domesticus
Length: 393  
Fragment?: false
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Publication
20137776 | J:158636
First Author: van der Lelij P
Year: 2010
Journal: Am J Hum Genet
Title: Warsaw breakage syndrome, a cohesinopathy associated with mutations in the XPD helicase family member DDX11/ChlR1.
Volume: 86
Issue: 2
Pages: 262-6
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DO Term
DOID:0060535 | Warsaw breakage syndrome
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Publication
10648783 | -
First Author: Hirota Y
Year: 2000
Journal: Nucleic Acids Res
Title: Characterization of the enzymatic activity of hChlR1, a novel human DNA helicase.
Volume: 28
Issue: 4
Pages: 917-24
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Publication
9013641 | -
First Author: Amann J
Year: 1997
Journal: J Biol Chem
Title: Characterization of putative human homologues of the yeast chromosome transmission fidelity gene, CHL1.
Volume: 272
Issue: 6
Pages: 3823-32
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Publication
24086532 | -
First Author: Rudra S
Year: 2013
Journal: PLoS One
Title: Chl1 DNA helicase regulates Scc2 deposition specifically during DNA-replication in Saccharomyces cerevisiae.
Volume: 8
Issue: 9
Pages: e75435
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Protein Domain
IPR028331 | CHL1/DDX11
Type: Family
Description: CHL1 DNA helicase plays a critical role in sister chromatid cohesion []. DDX11 is the mammalian homologue of the yeast CHL1. DDX11 is a DNA helicase involved in cellular proliferation []. In humans a second homologue has been identified, DDX12 []. DDX11 translocates on single-stranded DNA in the 5' to 3' direction in the presence of ATP and, to a lesser extent, dATP. Its unwinding activity requires a 5'-single-stranded region for helicase loading, since flush-ended duplex structures do not support unwinding []. Defects in DDX11 are the cause of Warsaw breakage syndrome (WBRS), a syndrome characterised by severe microcephaly, growth retardation, facial dysmorphism and abnormal skin pigmentation [].
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Publication
10931920 | -
First Author: L Holloway S
Year: 2000
Journal: Nucleic Acids Res
Title: CHL1 is a nuclear protein with an essential ATP binding site that exhibits a size-dependent effect on chromosome segregation.
Volume: 28
Issue: 16
Pages: 3056-64
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Publication
15226378 | -
First Author: Petronczki M
Year: 2004
Journal: J Cell Sci
Title: Sister-chromatid cohesion mediated by the alternative RF-CCtf18/Dcc1/Ctf8, the helicase Chl1 and the polymerase-alpha-associated protein Ctf4 is essential for chromatid disjunction during meiosis II.
Volume: 117
Issue: Pt 16
Pages: 3547-59
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Protein Domain
IPR013020 | Rad3/Chl1-like
Type: Family
Description: This entry includes a group of ATP-dependent helicases, including Rad3/XPD (ERCC2), Chl1/DDX11, DDX12, RTEL1 and BRIP1. Rad3/XPD is a subunit of RNA polII initiation factor TFIIH and of Nucleotide Excision Repair Factor 3 (NEF3) [, ]. DDX11/Chl1 is required for sister-chromatid cohesion [, , ]. Defects in DDX11 are the cause of Warsaw breakage syndrome (WBRS). It is a syndrome characterised by severe microcephaly, pre- and postnatal growth retardation, facial dysmorphism and abnormal skin pigmentation [].
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Publication
8631896 | -
First Author: Sung P
Year: 1996
Journal: J Biol Chem
Title: Reconstitution of TFIIH and requirement of its DNA helicase subunits, Rad3 and Rad25, in the incision step of nucleotide excision repair.
Volume: 271
Issue: 18
Pages: 10821-6
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Publication
7961739 | -
First Author: Svejstrup JQ
Year: 1994
Journal: J Biol Chem
Title: RNA polymerase transcription factor IIH holoenzyme from yeast.
Volume: 269
Issue: 45
Pages: 28044-8
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Protein
Q0VGM9
Organism: Mus musculus/domesticus
Length: 1203  
Fragment?: false
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Protein
Q3TE55
Organism: Mus musculus/domesticus
Length: 824  
Fragment?: true
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Protein
Z4YLW7
Organism: Mus musculus/domesticus
Length: 992  
Fragment?: true
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Protein
D3Z700
Organism: Mus musculus/domesticus
Length: 508  
Fragment?: false
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Protein
O08811
Organism: Mus musculus/domesticus
Length: 760  
Fragment?: false
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Protein
Q5SXJ3
Organism: Mus musculus/domesticus
Length: 1174  
Fragment?: false
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Protein
Q8K223
Organism: Mus musculus/domesticus
Length: 739  
Fragment?: false
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Protein
E9Q6K1
Organism: Mus musculus/domesticus
Length: 739  
Fragment?: false
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Protein
F6YA33
Organism: Mus musculus/domesticus
Length: 684  
Fragment?: true
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Protein
Q3UKK7
Organism: Mus musculus/domesticus
Length: 760  
Fragment?: false
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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