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Search results 1 to 100 out of 126 for Elp3

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0.042s
Type Details Score
Gene
Type: gene
Organism: human
Gene
Type: gene
Organism: cattle
Gene
Type: gene
Organism: rat
Gene
Type: gene
Organism: chicken
Gene
Type: gene
Organism: zebrafish
Gene
Type: gene
Organism: macaque, rhesus
Gene
Type: gene
Organism: frog, western clawed
Gene
Type: gene
Organism: dog, domestic
Gene
Type: gene
Organism: chimpanzee
Protein
Organism: Mus musculus/domesticus
Length: 463  
Fragment?: false
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Domain
Type: Family
Description: This entry includes proteins with a radical SAM domain and a radical SAM C-terminal extension domain. One such protein is elongator complex protein 3 (ELP3): the catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is itself part of the RNA polymerase II (RNAPII) holoenzyme responsible for transcriptional elongation []. A bacterial ELP3 homologue known as tRNA uridine(34) acetyltransferase, reflecting its role in mediating the formation of carboxymethyluridine in the wobble base at position 34 in tRNAs is also included in this family []. This entry also includes protein YhcC from Escherichia coli , which binds an [4Fe-4S]cluster, coordinated with three cysteines and an exchangeable S-adenosyl-L-methionine. YhcC cleaves S-adenosyl-L-methionine into methionine and 5'-deoxyadenosine []. This entry also includes archaeosine synthase subunit beta (RaSEA) from archaea, it is a SAM enzyme which plays a role in the synthesis of archaeosine []. Uncharacterised homologues are known from bacteria, archaea and eukaryotes.ELP3 is required for the complex integrity and for the association of the complex with nascent RNA transcript []. ELP3 is thought to act as a highly conserved histone acetyltransferase (HAT) capable of acetylating core histones in vitro, however, it is clearly a multi-domain protein. The HAT activity is thought to be present only in the C-terminal GNAT domain (histone acyltransferase domain) []. Studies suggest that both the histone acetyltransferase and radical S-adenosylmethionine domains are essential for function, although the exact role of the Radical SAM domain is still unclear []. The radical SAM domain is important for the structural integrity of the protein complex, as in yeast (previously demonstrated) []. However, an alternative may be that ELP3 binds ands cleave SAM, as seen in the archaea M. jannaschii. It has also been shown in previous studies that the mouse ELP3 does not require the histone acyltransferase domain for zygotic paternal genome demethylation [].
Publication
First Author: Glatt S
Year: 2016
Journal: Nat Struct Mol Biol
Title: Structural basis for tRNA modification by Elp3 from Dehalococcoides mccartyi.
Volume: 23
Issue: 9
Pages: 794-802
Publication
First Author: Ladang A
Year: 2015
Journal: J Exp Med
Title: Elp3 drives Wnt-dependent tumor initiation and regeneration in the intestine.
Volume: 212
Issue: 12
Pages: 2057-75
Publication
First Author: Paraskevopoulou C
Year: 2006
Journal: Mol Microbiol
Title: The Elongator subunit Elp3 contains a Fe4S4 cluster and binds S-adenosylmethionine.
Volume: 59
Issue: 3
Pages: 795-806
Publication
First Author: Greenwood C
Year: 2009
Journal: J Biol Chem
Title: An iron-sulfur cluster domain in Elp3 important for the structural integrity of elongator.
Volume: 284
Issue: 1
Pages: 141-9
Publication
First Author: Chinenov Y
Year: 2002
Journal: Trends Biochem Sci
Title: A second catalytic domain in the Elp3 histone acetyltransferases: a candidate for histone demethylase activity?
Volume: 27
Issue: 3
Pages: 115-7
Publication
First Author: Pereira M
Year: 2023
Journal: Biochim Biophys Acta Mol Basis Dis
Title: Amyloid pathology reduces ELP3 expression and tRNA modifications leading to impaired proteostasis.
Volume: 1870
Issue: 1
Pages: 166857
Publication
First Author: Yoo H
Year: 2016
Journal: Biochem Biophys Res Commun
Title: Indispensable role for mouse ELP3 in embryonic stem cell maintenance and early development.
Volume: 478
Issue: 2
Pages: 631-6
Publication  
First Author: Rosu A
Year: 2021
Journal: J Exp Med
Title: Loss of tRNA-modifying enzyme Elp3 activates a p53-dependent antitumor checkpoint in hematopoiesis.
Volume: 218
Issue: 3
Publication
First Author: Ninomiya Y
Year: 1995
Journal: J Biochem
Title: Genomic organization and isoforms of the mouse ELP gene.
Volume: 118
Issue: 2
Pages: 380-9
Publication  
First Author: Laguesse S
Year: 2017
Journal: Front Cell Neurosci
Title: Loss of Elp3 Impairs the Acetylation and Distribution of Connexin-43 in the Developing Cerebral Cortex.
Volume: 11
Pages: 122
Publication
First Author: Lemaitre P
Year: 2021
Journal: J Immunol
Title: Loss of the Transfer RNA Wobble Uridine-Modifying Enzyme Elp3 Delays T Cell Cycle Entry and Impairs T Follicular Helper Cell Responses through Deregulation of Atf4.
Volume: 206
Issue: 5
Pages: 1077-1087
Publication
First Author: Okada Y
Year: 2010
Journal: Nature
Title: A role for the elongator complex in zygotic paternal genome demethylation.
Volume: 463
Issue: 7280
Pages: 554-8
GXD Expression    
Probe: MGI:6401514
Assay Type: Western blot
Annotation Date: 2020-03-27
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754422
Stage: TS22
Assay Id: MGI:6401848
Age: embryonic day 14.5
Image: 1
Specimen Label: Elp3
Detected: true
Specimen Num: 3
GXD Expression    
Probe: MGI:5634911
Assay Type: Western blot
Annotation Date: 2020-03-27
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754422
Stage: TS22
Assay Id: MGI:6401849
Age: embryonic day 14.5
Image: 1
Specimen Label: Elp3
Detected: true
Specimen Num: 3
GXD Expression    
Probe: MGI:5634911
Assay Type: Western blot
Annotation Date: 2020-03-27
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754422
Stage: TS22
Assay Id: MGI:6401852
Age: embryonic day 14.5
Image: 1
Specimen Label: Elp3
Detected: true
Specimen Num: 3
GXD Expression    
Probe: MGI:6401514
Assay Type: Western blot
Annotation Date: 2020-03-27
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754422
Stage: TS22
Assay Id: MGI:6401854
Age: embryonic day 14.5
Image: 1
Specimen Label: Elp3
Detected: true
Specimen Num: 3
Publication
First Author: Wittschieben BO
Year: 1999
Journal: Mol Cell
Title: A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme.
Volume: 4
Issue: 1
Pages: 123-8
Publication  
First Author: Defraia CT
Year: 2013
Journal: BMC Plant Biol
Title: Elongator subunit 3 positively regulates plant immunity through its histone acetyltransferase and radical S-adenosylmethionine domains.
Volume: 13
Pages: 102
Publication
First Author: Estellon J
Year: 2014
Journal: Metallomics
Title: An integrative computational model for large-scale identification of metalloproteins in microbial genomes: a focus on iron-sulfur cluster proteins.
Volume: 6
Issue: 10
Pages: 1913-30
Publication
First Author: Yokogawa T
Year: 2019
Journal: Nat Chem Biol
Title: Identification of a radical SAM enzyme involved in the synthesis of archaeosine.
Volume: 15
Issue: 12
Pages: 1148-1155
Protein
Organism: Mus musculus/domesticus
Length: 547  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 553  
Fragment?: false
Publication
First Author: Bento-Abreu A
Year: 2018
Journal: Hum Mol Genet
Title: Elongator subunit 3 (ELP3) modifies ALS through tRNA modification.
Volume: 27
Issue: 7
Pages: 1276-1289
Publication
First Author: Stilger KL
Year: 2013
Journal: J Biol Chem
Title: Elongator protein 3 (Elp3) lysine acetyltransferase is a tail-anchored mitochondrial protein in Toxoplasma gondii.
Volume: 288
Issue: 35
Pages: 25318-29
Publication
First Author: Chen D
Year: 2022
Journal: EMBO J
Title: Elp3-mediated codon-dependent translation promotes mTORC2 activation and regulates macrophage polarization.
Volume: 41
Issue: 18
Pages: e109353
Publication
First Author: Close P
Year: 2012
Journal: J Biol Chem
Title: DERP6 (ELP5) and C3ORF75 (ELP6) regulate tumorigenicity and migration of melanoma cells as subunits of Elongator.
Volume: 287
Issue: 39
Pages: 32535-45
Publication
First Author: Creppe C
Year: 2009
Journal: Cell
Title: Elongator controls the migration and differentiation of cortical neurons through acetylation of alpha-tubulin.
Volume: 136
Issue: 3
Pages: 551-64
Protein Coding Gene
Type: protein_coding_gene
Organism: Mus caroli
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: mouse, laboratory
Protein Coding Gene
Type: protein_coding_gene
Organism: Mus pahari
Protein Coding Gene
Type: protein_coding_gene
Organism: Mus spretus
GXD Expression      
Probe: MGI:5634913
Assay Type: Western blot
Annotation Date: 2015-05-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754424
Stage: TS24
Assay Id: MGI:5635061
Age: embryonic day 16.0
Specimen Label: Cortex
Detected: true
Specimen Num: 1
GXD Expression      
Probe: MGI:5634913
Assay Type: Western blot
Annotation Date: 2015-05-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3266524
Stage: TS24
Assay Id: MGI:5635061
Age: embryonic day 16.0
Specimen Label: GE
Detected: true
Specimen Num: 2
GXD Expression    
Probe: MGI:7493960
Assay Type: RT-PCR
Annotation Date: 2023-06-29
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:7494020
Age: postnatal day 56
Image: S6
Specimen Label: WT
Detected: true
Specimen Num: 1
GXD Expression    
Probe: MGI:7493960
Assay Type: RT-PCR
Annotation Date: 2023-06-29
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:7494020
Age: postnatal day 56
Image: S6
Specimen Label: KO
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:6401513
Assay Type: Immunohistochemistry
Annotation Date: 2020-03-26
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3270422
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6401523
Age: embryonic day 14.5
Image: 1B
Note: Co-expressed with Gja1 in cortical neurons.
Specimen Label: 1B
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:5634913
Assay Type: Immunohistochemistry
Annotation Date: 2015-05-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271122
Pattern: Widespread
Stage: TS22
Assay Id: MGI:5635080
Age: embryonic day 14.5
Note: Expressed in all cells.
Specimen Label: 1P
Detected: true
Specimen Num: 1
GXD Expression    
Probe: MGI:5634913
Assay Type: Immunohistochemistry
Annotation Date: 2015-05-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271122
Pattern: Widespread
Stage: TS22
Assay Id: MGI:5635080
Age: embryonic day 14.5
Specimen Label: 1Q
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:6401513
Assay Type: Immunohistochemistry
Annotation Date: 2020-03-26
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271122
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6401523
Age: embryonic day 14.5
Image: 1B
Note: Co-expressed with Gja1 in cortical neurons.
Specimen Label: 1B
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:5634913
Assay Type: Immunohistochemistry
Annotation Date: 2015-05-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271222
Pattern: Widespread
Stage: TS22
Assay Id: MGI:5635080
Age: embryonic day 14.5
Note: Expressed in all cells.
Specimen Label: 1P
Detected: true
Specimen Num: 1
GXD Expression    
Probe: MGI:5634913
Assay Type: Immunohistochemistry
Annotation Date: 2015-05-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271222
Pattern: Widespread
Stage: TS22
Assay Id: MGI:5635080
Age: embryonic day 14.5
Specimen Label: 1Q
Detected: true
Specimen Num: 2
GXD Expression  
Probe: MGI:5634913
Assay Type: Immunohistochemistry
Annotation Date: 2015-05-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754422
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:5635080
Age: embryonic day 14.5
Note: Expressed in the cytoplasm.
Specimen Label: 1R/R'
Detected: true
Specimen Num: 3
GXD Expression
Probe: MGI:6401513
Assay Type: Immunohistochemistry
Annotation Date: 2020-03-26
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1754722
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:6401523
Age: embryonic day 14.5
Image: 1B
Note: Co-expressed with Gja1 in cortical progenitor cells lining the ventricle.
Specimen Label: 1B
Detected: true
Specimen Num: 1
Publication
First Author: Wang YP
Year: 2014
Journal: EMBO J
Title: Regulation of G6PD acetylation by SIRT2 and KAT9 modulates NADPH homeostasis and cell survival during oxidative stress.
Volume: 33
Issue: 12
Pages: 1304-20
Publication
First Author: Ura H
Year: 2011
Journal: EMBO J
Title: Eed/Sox2 regulatory loop controls ES cell self-renewal through histone methylation and acetylation.
Volume: 30
Issue: 11
Pages: 2190-204
Publication
First Author: Wang S
Year: 2015
Journal: PLoS Biol
Title: Insulin and mTOR Pathway Regulate HDAC3-Mediated Deacetylation and Activation of PGK1.
Volume: 13
Issue: 9
Pages: e1002243
Publication
First Author: Even A
Year: 2021
Journal: Nat Commun
Title: ATP-citrate lyase promotes axonal transport across species.
Volume: 12
Issue: 1
Pages: 5878
Publication
First Author: Freeman S
Year: 2019
Journal: EMBO Rep
Title: Proteostasis is essential during cochlear development for neuron survival and hair cell polarity.
Volume: 20
Issue: 9
Pages: e47097
Publication
First Author: Naftelberg S
Year: 2016
Journal: PLoS Genet
Title: Phosphatidylserine Ameliorates Neurodegenerative Symptoms and Enhances Axonal Transport in a Mouse Model of Familial Dysautonomia.
Volume: 12
Issue: 12
Pages: e1006486
Publication
First Author: Ma J
Year: 2019
Journal: PLoS Biol
Title: Autism candidate gene DIP2A regulates spine morphogenesis via acetylation of cortactin.
Volume: 17
Issue: 10
Pages: e3000461
Publication
First Author: Laguesse S
Year: 2015
Journal: Dev Cell
Title: A Dynamic Unfolded Protein Response Contributes to the Control of Cortical Neurogenesis.
Volume: 35
Issue: 5
Pages: 553-67
Publication
First Author: Chen YT
Year: 2009
Journal: Mol Cell Biol
Title: Loss of mouse Ikbkap, a subunit of elongator, leads to transcriptional deficits and embryonic lethality that can be rescued by human IKBKAP.
Volume: 29
Issue: 3
Pages: 736-44
Publication
First Author: Allis CD
Year: 2007
Journal: Cell
Title: New nomenclature for chromatin-modifying enzymes.
Volume: 131
Issue: 4
Pages: 633-6
Publication
First Author: Cobellis G
Year: 2005
Journal: Nucleic Acids Res
Title: Tagging genes with cassette-exchange sites.
Volume: 33
Issue: 4
Pages: e44
Publication      
First Author: Mammalian Functional Genomics Centre
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the NorCOMM project by the Mammalian Functional Genomics Centre (Mfgc), University of Manitoba
Publication      
First Author: NIH Mouse Knockout Inventory
Year: 2004
Journal: MGI Direct Data Submission
Title: Information obtained from the NIH Mouse Knockout Inventory
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: RIKEN Data Curation in Mouse Genome Informatics
Publication
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
Publication
First Author: Friedel RH
Year: 2007
Journal: Brief Funct Genomic Proteomic
Title: EUCOMM--the European conditional mouse mutagenesis program.
Volume: 6
Issue: 3
Pages: 180-5
Publication
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
Publication
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
Publication        
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
Publication
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
Publication
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
Publication      
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
Publication
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
Publication        
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Publication
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
Publication
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582