| Type |
Details |
Score |
| Gene |
| Type: |
gene |
| Organism: |
human |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
frog, western clawed |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Protein ERGIC-53, also known as lectin mannose-binding 1 (LMAN1) is a cargo receptor responsible for the export of a subset of glycoproteins from the endoplasmic reticulum. LMAN1 binds to both glycoprotein cargo and its soluble coreceptor MCFD2 through its carbohydrate recognition domain (CRD) in a Ca(2+)-dependent manner []. LMAN1 is a lectin carrier protein that may mediate MMP-9 (matrix metalloproteinase-9) secretion [].Mutations in the LMAN1 and the MCFD2 genes cause combined deficiency of factor V (FV) and factor VIII (FVIII) (F5F8D, or FV+FVIII), an autosomal recessive bleeding disorder []. |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1005357 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2009-01-15 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3564522 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:3826049 |
| Age: |
embryonic day 14.5 |
| Image: |
Additional file 4 Lman1 |
|
| Specimen Label: |
Additional file 4 Lman1 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Duellman T |
| Year: |
2015 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
LMAN1 (ERGIC-53) is a potential carrier protein for matrix metalloproteinase-9 glycoprotein secretion. |
| Volume: |
464 |
| Issue: |
3 |
| Pages: |
685-91 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Everett LA |
| Year: |
2024 |
| Journal: |
JCI Insight |
| Title: |
LMAN1 serves as a cargo receptor for thrombopoietin. |
| Volume: |
9 |
| Issue: |
24 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zheng C |
| Year: |
2013 |
| Journal: |
J Biol Chem |
| Title: |
Structural characterization of carbohydrate binding by LMAN1 protein provides new insight into the endoplasmic reticulum export of factors V (FV) and VIII (FVIII). |
| Volume: |
288 |
| Issue: |
28 |
| Pages: |
20499-509 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hao H |
| Year: |
2014 |
| Journal: |
Adv Exp Med Biol |
| Title: |
In vivo function of the ER-Golgi transport protein LMAN1 in photoreceptor homeostasis. |
| Volume: |
801 |
|
| Pages: |
395-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Everett LA |
| Year: |
2020 |
| Journal: |
Blood Adv |
| Title: |
Altered phenotype in LMAN1-deficient mice with low levels of residual LMAN1 expression. |
| Volume: |
4 |
| Issue: |
22 |
| Pages: |
5635-5643 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang B |
| Year: |
2011 |
| Journal: |
Blood |
| Title: |
Mice deficient in LMAN1 exhibit FV and FVIII deficiencies and liver accumulation of α1-antitrypsin. |
| Volume: |
118 |
| Issue: |
12 |
| Pages: |
3384-91 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Spreafico M |
| Year: |
2009 |
| Journal: |
Semin Thromb Hemost |
| Title: |
Combined Factor V and Factor VIII Deficiency. |
| Volume: |
35 |
| Issue: |
4 |
| Pages: |
390-9 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
517
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
289
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
547
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhu M |
| Year: |
2018 |
| Journal: |
Blood Adv |
| Title: |
Analysis of MCFD2- and LMAN1-deficient mice demonstrates distinct functions in vivo. |
| Volume: |
2 |
| Issue: |
9 |
| Pages: |
1014-1021 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Everett LA |
| Year: |
2014 |
| Journal: |
Blood |
| Title: |
Murine coagulation factor VIII is synthesized in endothelial cells. |
| Volume: |
123 |
| Issue: |
24 |
| Pages: |
3697-705 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus caroli |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mattioli L |
| Year: |
2006 |
| Journal: |
J Cell Sci |
| Title: |
ER storage diseases: a role for ERGIC-53 in controlling the formation and shape of Russell bodies. |
| Volume: |
119 |
| Issue: |
Pt 12 |
| Pages: |
2532-41 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7428408 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-01-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603917 |
|
| Stage: |
TS17 |
| Assay Id: |
MGI:7428482 |
| Age: |
embryonic day 10.5 |
| Image: |
S3 |
|
| Specimen Label: |
Control |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7428408 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-01-24 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603917 |
|
| Stage: |
TS17 |
| Assay Id: |
MGI:7428482 |
| Age: |
embryonic day 10.5 |
| Image: |
S3 |
|
| Specimen Label: |
KO |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7574248 |
| Assay Type: |
Immunohistochemistry |
| Annotation Date: |
2024-01-18 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3598828 |
| Pattern: |
Spotted |
| Stage: |
TS28 |
| Assay Id: |
MGI:7574381 |
| Age: |
postnatal adult |
|
| Note: |
There is co-localization amongst the different proteins. |
| Specimen Label: |
4 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Velloso LM |
| Year: |
2002 |
| Journal: |
J Biol Chem |
| Title: |
Crystal structure of the carbohydrate recognition domain of p58/ERGIC-53, a protein involved in glycoprotein export from the endoplasmic reticulum. |
| Volume: |
277 |
| Issue: |
18 |
| Pages: |
15979-84 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nichols RJ |
| Year: |
2004 |
| Journal: |
J Biol Chem |
| Title: |
Characterization of three paralogous members of the Mammalian vaccinia related kinase family. |
| Volume: |
279 |
| Issue: |
9 |
| Pages: |
7934-46 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nakajima K |
| Year: |
2002 |
| Journal: |
Mol Cell Biol |
| Title: |
Molecular motor KIF1C is not essential for mouse survival and motor-dependent retrograde Golgi apparatus-to-endoplasmic reticulum transport. |
| Volume: |
22 |
| Issue: |
3 |
| Pages: |
866-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nori A |
| Year: |
2004 |
| Journal: |
Biochem J |
| Title: |
Vesicle budding from endoplasmic reticulum is involved in calsequestrin routing to sarcoplasmic reticulum of skeletal muscles. |
| Volume: |
379 |
| Issue: |
Pt 2 |
| Pages: |
505-12 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Barone V |
| Year: |
2015 |
| Journal: |
Histochem Cell Biol |
| Title: |
Yip1B isoform is localized at ER-Golgi intermediate and cis-Golgi compartments and is not required for maintenance of the Golgi structure in skeletal muscle. |
| Volume: |
143 |
| Issue: |
3 |
| Pages: |
235-43 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Esselens C |
| Year: |
2004 |
| Journal: |
J Cell Biol |
| Title: |
Presenilin 1 mediates the turnover of telencephalin in hippocampal neurons via an autophagic degradative pathway. |
| Volume: |
166 |
| Issue: |
7 |
| Pages: |
1041-54 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Teng Y |
| Year: |
2015 |
| Journal: |
Biochem Pharmacol |
| Title: |
UBXN2A regulates nicotinic receptor degradation by modulating the E3 ligase activity of CHIP. |
| Volume: |
97 |
| Issue: |
4 |
| Pages: |
518-530 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Garver WS |
| Year: |
2000 |
| Journal: |
J Lipid Res |
| Title: |
Localization of the murine Niemann-Pick C1 protein to two distinct intracellular compartments. |
| Volume: |
41 |
| Issue: |
5 |
| Pages: |
673-87 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nishiguchi S |
| Year: |
1996 |
| Journal: |
J Biochem |
| Title: |
A catalogue of genes in mouse embryonal carcinoma F9 cells identified with expressed sequence tags. |
| Volume: |
119 |
| Issue: |
4 |
| Pages: |
749-67 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Valkova C |
| Year: |
2011 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Sorting receptor Rer1 controls surface expression of muscle acetylcholine receptors by ER retention of unassembled alpha-subunits. |
| Volume: |
108 |
| Issue: |
2 |
| Pages: |
621-5 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Merte J |
| Year: |
2010 |
| Journal: |
Nat Cell Biol |
| Title: |
Sec24b selectively sorts Vangl2 to regulate planar cell polarity during neural tube closure. |
| Volume: |
12 |
| Issue: |
1 |
| Pages: |
41-6; sup pp 1-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rezvani K |
| Year: |
2009 |
| Journal: |
J Neurosci |
| Title: |
UBXD4, a UBX-containing protein, regulates the cell surface number and stability of alpha3-containing nicotinic acetylcholine receptors. |
| Volume: |
29 |
| Issue: |
21 |
| Pages: |
6883-96 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jang CW |
| Year: |
2015 |
| Journal: |
Genes Dev |
| Title: |
Histone H3.3 maintains genome integrity during mammalian development. |
| Volume: |
29 |
| Issue: |
13 |
| Pages: |
1377-92 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Aure MH |
| Year: |
2023 |
| Journal: |
Nat Commun |
| Title: |
FGFR2 is essential for salivary gland duct homeostasis and MAPK-dependent seromucous acinar cell differentiation. |
| Volume: |
14 |
| Issue: |
1 |
| Pages: |
6485 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Norlin S |
| Year: |
2018 |
| Journal: |
Development |
| Title: |
The ATPase activity of Asna1/TRC40 is required for pancreatic progenitor cell survival. |
| Volume: |
145 |
| Issue: |
1 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Naba A |
| Year: |
2017 |
| Journal: |
Sci Rep |
| Title: |
Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression. |
| Volume: |
7 |
|
| Pages: |
40495 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hoffman BG |
| Year: |
2008 |
| Journal: |
Genome Biol |
| Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
| Volume: |
9 |
| Issue: |
6 |
| Pages: |
R99 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2001 |
|
| Title: |
RIKEN Data Curation in Mouse Genome Informatics |
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•
•
•
•
•
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| Publication |
| First Author: |
Ko MS |
| Year: |
2000 |
| Journal: |
Development |
| Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
| Volume: |
127 |
| Issue: |
8 |
| Pages: |
1737-49 |
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•
•
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•
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| First Author: |
Hansen J |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
| Volume: |
100 |
| Issue: |
17 |
| Pages: |
9918-22 |
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•
•
•
•
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| Publication |
| First Author: |
MGI and IMPC |
| Year: |
2018 |
| Journal: |
Database Release |
| Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
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•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
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•
•
•
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| Publication |
| First Author: |
Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
31 |
| Issue: |
1 |
| Pages: |
278-81 |
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•
•
•
•
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Lennon G |
| Year: |
1999 |
| Journal: |
Database Download |
| Title: |
WashU-HHMI Mouse EST Project |
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•
•
•
•
•
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| Publication |
| First Author: |
Wellcome Trust Sanger Institute |
| Year: |
2009 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
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•
•
•
•
•
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| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
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1670-9 |
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| First Author: |
The Gene Ontology Consortium |
| Year: |
2014 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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•
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| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
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•
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•
•
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
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| Title: |
MGI Sequence Curation Reference |
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•
•
•
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| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
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•
•
•
•
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| Publication |
| First Author: |
Kawai J |
| Year: |
2001 |
| Journal: |
Nature |
| Title: |
Functional annotation of a full-length mouse cDNA collection. |
| Volume: |
409 |
| Issue: |
6821 |
| Pages: |
685-90 |
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•
•
•
•
•
|
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| First Author: |
MGD Nomenclature Committee |
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1995 |
|
| Title: |
Nomenclature Committee Use |
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•
•
•
•
•
|
| Publication |
| First Author: |
Zambrowicz BP |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
| Volume: |
100 |
| Issue: |
24 |
| Pages: |
14109-14 |
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•
•
•
•
|
| Publication |
| First Author: |
Skarnes WC |
| Year: |
2011 |
| Journal: |
Nature |
| Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
| Volume: |
474 |
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7351 |
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337-42 |
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•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
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•
•
•
•
•
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| First Author: |
UniProt-GOA |
| Year: |
2012 |
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| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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•
•
•
•
•
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| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
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| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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•
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The Jackson Laboratory Mouse Radiation Hybrid Database |
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2004 |
| Journal: |
Database Release |
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Mouse T31 Radiation Hybrid Data Load |
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Okazaki Y |
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2002 |
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Nature |
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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
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563-73 |
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The Gene Ontology Consortium |
| Year: |
2010 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
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2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
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2010 |
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Annotation inferences using phylogenetic trees |
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Mouse Genome Database and National Center for Biotechnology Information |
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2000 |
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Database Release |
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Entrez Gene Load |
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Allen Institute for Brain Science |
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2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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Mouse Genome Informatics Scientific Curators |
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2009 |
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Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
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| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
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Automatic Encodes (AutoE) Reference |
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Database Release |
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SWISS-PROT Annotated protein sequence database |
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Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
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Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Zhang Y |
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2022 |
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Biochem J |
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LMAN1-MCFD2 complex is a cargo receptor for the ER-Golgi transport of α1-antitrypsin. |
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479 |
| Issue: |
7 |
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839-855 |
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