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Search results 1 to 91 out of 91 for Lsm10

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Hits by Pathway

Hits by Category

Hits by Strain

Type Details Score
Gene
84967 | LSM10
Type: gene
Organism: human
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Gene
548997 | lsm10
Type: gene
Organism: frog, western clawed
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Gene
618089 | LSM10
Type: gene
Organism: cattle
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Protein Coding Gene
MGI:2151045 | Lsm10
Type: protein_coding_gene
Organism: mouse, laboratory
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Gene
366468 | Lsm10
Type: gene
Organism: rat
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Gene
475335 | LSM10
Type: gene
Organism: dog, domestic
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Gene
456754 | LSM10
Type: gene
Organism: chimpanzee
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Gene
419621 | LSM10
Type: gene
Organism: chicken
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Gene
100536270 | lsm10
Type: gene
Organism: zebrafish
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Gene
713277 | LSM10
Type: gene
Organism: macaque, rhesus
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Protein Coding Gene
MGP_CAROLIEiJ_G0026467 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0028770 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0028729 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0028682 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0028752 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0028466 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_2151045 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0029194 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0027899 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0028432 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0028581 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0028548 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0028682 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0028574 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0029232 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0027620 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0027979 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0028798 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0027446 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
11574479 | J:71849
First Author: Pillai RS
Year: 2001
Journal: EMBO J
Title: Purified U7 snRNPs lack the Sm proteins D1 and D2 but contain Lsm10, a new 14 kDa Sm D1-like protein.
Volume: 20
Issue: 19
Pages: 5470-9
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Publication
- | J:77559
   
First Author: Strausberg R
Year: 2002
Journal: GenBank Submission
Title: Mus musuclus, similar to U7 snRNP-specific Sm-like protein LSM10, clone MGC: 37606 IMAGE: 498202, mRNA, complete cds
Pages: BC024543
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Publication
- | J:77793
   
First Author: Strausberg R
Year: 2002
Journal: GenBank Submission
Title: Mus musculus, clone MGC: 31519 IMAGE: 4489522, mRNA, complete cds
Pages: BC026476
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Publication
19470752 | J:151443
First Author: Yang XC
Year: 2009
Journal: Mol Cell Biol
Title: Three proteins of the U7-specific Sm ring function as the molecular ruler to determine the site of 3'-end processing in mammalian histone pre-mRNA.
Volume: 29
Issue: 15
Pages: 4045-56
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Publication
- | J:175295
     
First Author: Mouse Genome Informatics and the Wellcome Trust Sanger Institute Mouse Genetics Project (MGP)
Year: 2011
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the Wellcome Trust Sanger Institute (WTSI) Mouse Resources Portal
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Publication
30973865 | J:274872
First Author: Ingham NJ
Year: 2019
Journal: PLoS Biol
Title: Mouse screen reveals multiple new genes underlying mouse and human hearing loss.
Volume: 17
Issue: 4
Pages: e3000194
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:148605
     
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Gene
101884591 | LOC101884591
Type: gene
Organism: zebrafish
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Gene
key_76685 | *LSM10*
Type: gene
Organism: pig, domestic
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UniProt Feature
UniProt Feature
Begin: 1
Description: U7 snRNA-associated Sm-like protein LSm10
Type: chain
End: 122
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Protein
Q8QZX5
Organism: Mus musculus/domesticus
Length: 122  
Fragment?: false
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Protein
A8Y5G9
Organism: Mus musculus/domesticus
Length: 93  
Fragment?: true
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GO Term
GO:0034731 | Lsm-containing SMN-Sm protein complex
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Publication
12975319 | J:85742
First Author: Pillai RS
Year: 2003
Journal: Genes Dev
Title: Unique Sm core structure of U7 snRNPs: assembly by a specialized SMN complex and the role of a new component, Lsm11, in histone RNA processing.
Volume: 17
Issue: 18
Pages: 2321-33
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Protein
Q9CVB3
Organism: Mus musculus/domesticus
Length: 164  
Fragment?: true
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Protein Domain
IPR039267 | Lsm11
Type: Family
Description: The eukaryotic Sm and Sm-like (Lsm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel β-sheet [, , ]. Lsm11 is an SmD2-like subunit which binds U7 snRNA along with Lsm10 and five other Sm subunits to form a 7-membered ring structure. Lsm11 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing [, ].
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Publication
36130491 | J:329300
First Author: Tisdale S
Year: 2022
Journal: Cell Rep
Title: SMN controls neuromuscular junction integrity through U7 snRNP.
Volume: 40
Issue: 12
Pages: 111393
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Publication
15824063 | J:99447
First Author: Azzouz TN
Year: 2005
Journal: Nucleic Acids Res
Title: U7 snRNP-specific Lsm11 protein: dual binding contacts with the 100 kDa zinc finger processing factor (ZFP100) and a ZFP100-independent function in histone RNA 3' end processing.
Volume: 33
Issue: 7
Pages: 2106-17
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Protein Domain
IPR034109 | Lsm11_M
Type: Domain
Description: This entry represents the middle domain of Lsm11.The eukaryotic Sm and Sm-like (Lsm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel β-sheet [, , ]. Lsm11 is an SmD2-like subunit which binds U7 snRNA along with Lsm10 and five other Sm subunits to form a 7-membered ring structure. Lsm11 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing [, ].
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Publication
16087681 | J:156230
First Author: Azzouz TN
Year: 2005
Journal: J Biol Chem
Title: Toward an assembly line for U7 snRNPs: interactions of U7-specific Lsm proteins with PRMT5 and SMN complexes.
Volume: 280
Issue: 41
Pages: 34435-40
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Allele
Tg(Rnu7-SMN2*,PGK1-EGFP)4Dasch | MGI:5767008
Name: transgene insertion 4, Daniel Schuemperli
Allele Type: Transgenic
Attribute String: Knockdown, Reporter
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Publication
22454071 | J:231142
 
First Author: Nlend RN
Year: 2012
Journal: Methods Mol Biol
Title: Antisense genes to induce exon inclusion.
Volume: 867
Pages: 325-47
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Strain
MGI:5767093 | STOCK Grm7<Tg(SMN2)89Ahmb> Smn1<tm1Msd> Tg(Rnu7-SMN2*,PGK1-EGFP)4Dasch/DaschMmjax
Attribute String: mutant stock, targeted mutation, transgenic
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Publication
19010792 | J:143540
First Author: Meyer K
Year: 2009
Journal: Hum Mol Genet
Title: Rescue of a severe mouse model for spinal muscular atrophy by U7 snRNA-mediated splicing modulation.
Volume: 18
Issue: 3
Pages: 546-55
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Publication
26621405 | J:231139
 
First Author: Neve A
Year: 2016
Journal: Mol Cell Neurosci
Title: Central and peripheral defects in motor units of the diaphragm of spinal muscular atrophy mice.
Volume: 70
Pages: 30-41
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Publication
20832308 | J:231141
First Author: Voigt T
Year: 2010
Journal: Neuromuscul Disord
Title: Ultrastructural changes in diaphragm neuromuscular junctions in a severe mouse model for Spinal Muscular Atrophy and their prevention by bifunctional U7 snRNA correcting SMN2 splicing.
Volume: 20
Issue: 11
Pages: 744-52
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Publication
25692239 | J:231140
First Author: Huo Q
Year: 2014
Journal: RNA Biol
Title: Splicing changes in SMA mouse motoneurons and SMN-depleted neuroblastoma cells: evidence for involvement of splicing regulatory proteins.
Volume: 11
Issue: 11
Pages: 1430-46
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Protein
Q8BUV6
Organism: Mus musculus/domesticus
Length: 361  
Fragment?: false
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Protein
Q5SUH5
Organism: Mus musculus/domesticus
Length: 361  
Fragment?: false
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Publication
11259661 | -
First Author: Achsel T
Year: 2001
Journal: Proc Natl Acad Sci U S A
Title: The Sm domain is an ancient RNA-binding motif with oligo(U) specificity.
Volume: 98
Issue: 7
Pages: 3685-9
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Publication
10369684 | -
First Author: Salgado-Garrido J
Year: 1999
Journal: EMBO J
Title: Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin.
Volume: 18
Issue: 12
Pages: 3451-62
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Publication
24513854 | -
First Author: Zhou L
Year: 2014
Journal: Cell Res
Title: Crystal structure and biochemical analysis of the heptameric Lsm1-7 complex.
Volume: 24
Issue: 4
Pages: 497-500
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
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