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Search results 1 to 97 out of 97 for Odf1

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Categories

Hits by Category

Hits by Strain

Type Details Score
Gene
4956 | ODF1
Type: gene
Organism: human
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Gene
24610 | Odf1
Type: gene
Organism: rat
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Gene
475057 | ODF1
Type: gene
Organism: dog, domestic
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Gene
464323 | ODF1
Type: gene
Organism: chimpanzee
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Gene
281366 | ODF1
Type: gene
Organism: cattle
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Gene
420257 | ODF1
Type: gene
Organism: chicken
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Gene
707269 | ODF1
Type: gene
Organism: macaque, rhesus
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Protein Coding Gene
MGI:97424 | Odf1
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
7789171 | J:26741
First Author: Hoyer-Fender S
Year: 1995
Journal: Cytogenet Cell Genet
Title: Sequence of mouse Odf1 cDNA and its chromosomal localization: extension of the linkage group between human chromosome 8 and mouse chromosome 15.
Volume: 70
Issue: 3-4
Pages: 200-4
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Publication
31475146 | J:311086
 
First Author: Tapia Contreras C
Year: 2019
Journal: Front Cell Dev Biol
Title: CCDC42 Localizes to Manchette, HTCA and Tail and Interacts With ODF1 and ODF2 in the Formation of the Male Germ Cell Cytoskeleton.
Volume: 7
Pages: 151
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Publication
22037768 | J:183675
First Author: Yang K
Year: 2012
Journal: Mol Cell Biol
Title: The small heat shock protein ODF1/HSPB10 is essential for tight linkage of sperm head to tail and male fertility in mice.
Volume: 32
Issue: 1
Pages: 216-25
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Publication
36142191 | J:329308
 
First Author: Hoyer-Fender S
Year: 2022
Journal: Int J Mol Sci
Title: Development of the Connecting Piece in ODF1-Deficient Mouse Spermatids.
Volume: 23
Issue: 18
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Publication
25118300 | J:218717
First Author: Yang K
Year: 2014
Journal: Reproduction
Title: Haplo-deficiency of ODF1/HSPB10 in mouse sperm causes relaxation of head-to-tail linkage.
Volume: 148
Issue: 5
Pages: 499-506
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Protein Coding Gene
MGP_CAROLIEiJ_G0019749 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0021806 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0021766 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0021747 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0021773 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0021547 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_97424 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0022212 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0021064 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0021516 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0021640 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0021618 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0021710 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0021642 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0022235 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0020808 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0021119 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0019758 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0020646 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
32859975 | J:326386
First Author: Tapia Contreras C
Year: 2020
Journal: Sci Rep
Title: The WD40-protein CFAP52/WDR16 is a centrosome/basal body protein and localizes to the manchette and the flagellum in male germ cells.
Volume: 10
Issue: 1
Pages: 14240
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GXD Expression
GXD Expression
     
Probe: MGI:4356489
Assay Type: RT-PCR
Annotation Date: 2009-09-14
Strength: Present
Sex: Male
Emaps: EMAPS:1797228
Stage: TS28
Assay Id: MGI:4357815
Age: postnatal week 12
Specimen Label: +/+
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:4356489
Assay Type: RT-PCR
Annotation Date: 2009-09-14
Strength: Present
Sex: Male
Emaps: EMAPS:1797228
Stage: TS28
Assay Id: MGI:4357815
Age: postnatal week 12
Specimen Label: +/-
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:4356489
Assay Type: RT-PCR
Annotation Date: 2009-09-14
Strength: Present
Sex: Male
Emaps: EMAPS:1797228
Stage: TS28
Assay Id: MGI:4357815
Age: postnatal week 12
Specimen Label: -/-
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:5816750
Assay Type: Northern blot
Annotation Date: 2017-01-06
Strength: Present
Sex: Male
Emaps: EMAPS:1797228
Stage: TS28
Assay Id: MGI:5816753
Age: postnatal day 24
Specimen Label: +/-
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:5816750
Assay Type: Northern blot
Annotation Date: 2017-01-06
Strength: Present
Sex: Male
Emaps: EMAPS:1797228
Stage: TS28
Assay Id: MGI:5816753
Age: postnatal day 24
Specimen Label: +/-
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:5816750
Assay Type: Northern blot
Annotation Date: 2017-01-06
Strength: Absent
Sex: Male
Emaps: EMAPS:1797228
Stage: TS28
Assay Id: MGI:5816753
Age: postnatal day 24
Specimen Label: -/-
Detected: false
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:5816750
Assay Type: Northern blot
Annotation Date: 2017-01-06
Strength: Absent
Sex: Male
Emaps: EMAPS:1797228
Stage: TS28
Assay Id: MGI:5816753
Age: postnatal day 24
Specimen Label: -/-
Detected: false
Specimen Num: 4
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Male
Emaps: EMAPS:1706828
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6693167
Age: postnatal adult
Image: MRC Harwell_2221027
Specimen Label: MRC Harwell_2221027
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Male
Emaps: EMAPS:1797228
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6693167
Age: postnatal adult
Image: MRC Harwell_2221028
Specimen Label: MRC Harwell_2221028
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Ambiguous
Sex: Male
Emaps: EMAPS:3281228
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6693167
Age: postnatal adult
Image: MRC Harwell_2221027
Specimen Label: MRC Harwell_2221027
Specimen Num: 1
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Publication
37371084 | J:338029
 
First Author: He X
Year: 2023
Journal: Cells
Title: Deficiency of the Tmem232 Gene Causes Male Infertility with Morphological Abnormalities of the Sperm Flagellum in Mice.
Volume: 12
Issue: 12
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Publication
12079992 | J:77520
First Author: Nakamura Y
Year: 2002
Journal: Biol Reprod
Title: Molecular cloning and characterization of oppo 1: a haploid germ cell-specific complementary DNA encoding sperm tail protein.
Volume: 67
Issue: 1
Pages: 1-7
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Publication
12062093 | J:77015
First Author: Deng W
Year: 2002
Journal: Dev Cell
Title: miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis.
Volume: 2
Issue: 6
Pages: 819-30
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Publication
9337410 | J:44022
First Author: Matsui M
Year: 1997
Journal: Mamm Genome
Title: Mapping of six germ-cell-specific genes to mouse chromosomes.
Volume: 8
Issue: 11
Pages: 873-4
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Publication
25762440 | J:221349
First Author: Vourekas A
Year: 2015
Journal: Genes Dev
Title: The RNA helicase MOV10L1 binds piRNA precursors to initiate piRNA processing.
Volume: 29
Issue: 6
Pages: 617-29
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Publication
16024815 | J:100030
First Author: Urano A
Year: 2005
Journal: Mol Cell Biol
Title: Infertility with defective spermiogenesis in mice lacking AF5q31, the target of chromosomal translocation in human infant leukemia.
Volume: 25
Issue: 15
Pages: 6834-45
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Publication
21383078 | J:170319
First Author: Yabuta Y
Year: 2011
Journal: J Cell Biol
Title: TDRD5 is required for retrotransposon silencing, chromatoid body assembly, and spermiogenesis in mice.
Volume: 192
Issue: 5
Pages: 781-95
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Publication
36543770 | J:332220
First Author: Uchida A
Year: 2022
Journal: Nat Commun
Title: SOX17-positive rete testis epithelium is required for Sertoli valve formation and normal spermiogenesis in the male mouse.
Volume: 13
Issue: 1
Pages: 7860
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Publication
17062627 | J:137511
First Author: Lin Q
Year: 2006
Journal: Nucleic Acids Res
Title: Mutagenesis of diploid mammalian genes by gene entrapment.
Volume: 34
Issue: 20
Pages: e139
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Publication
24194600 | J:228563
First Author: Koscielny G
Year: 2014
Journal: Nucleic Acids Res
Title: The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Volume: 42
Issue: Database issue
Pages: D802-9
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Publication
- | J:204739
     
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
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Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:155856
       
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
10373309 | -
First Author: Shao X
Year: 1999
Journal: Dev Biol
Title: Spag4, a novel sperm protein, binds outer dense-fiber protein Odf1 and localizes to microtubules of manchette and axoneme.
Volume: 211
Issue: 1
Pages: 109-23
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Publication
12820655 | -
First Author: Fontaine JM
Year: 2003
Journal: Cell Stress Chaperones
Title: The sperm outer dense fiber protein is the 10th member of the superfamily of mammalian small stress proteins.
Volume: 8
Issue: 1
Pages: 62-9
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Protein Domain
IPR037552 | ODF1_ACD
Type: Domain
Description: ODF1 is a component of the outer dense fibres (ODF), which are cytoskeletal structures specifically found in the sperm tails of vertebrates. ODF1 has been assigned to the heat shock protein family based on its overall structural features and especially on its conserved alpha-crystallin domain, and it is also known as HSPB10 []. ODF1 is essential for tight linkage of sperm head to tail and is essential for male fertility [].This entry represents the alpha crystallin domain (ACD) of ODF1.
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Protein Domain
IPR037389 | ODFP
Type: Family
Description: ODF1 is a component of the outer dense fibres (ODF), which are cytoskeletal structures specifically found in the sperm tails of vertebrates. ODF1 has been assigned to the heat shock protein family based on its overall structural features and especially on its conserved alpha-crystallin domain, and it is also known as HSPB10 []. ODF1 is essential for tight linkage of sperm head to tail and is essential for male fertility [].
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Protein
Q61999
Organism: Mus musculus/domesticus
Length: 247  
Fragment?: false
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Protein
A6H656
Organism: Mus musculus/domesticus
Length: 248  
Fragment?: false
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Publication
9691178 | J:49312
First Author: Tarnasky H
Year: 1998
Journal: Cytogenet Cell Genet
Title: A novel testis-specific gene, SPAG4, whose product interacts specifically with outer dense fiber protein ODF27, maps to human chromosome 20q11.2.
Volume: 81
Issue: 1
Pages: 65-7
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Publication
23602831 | -
First Author: Shoji K
Year: 2013
Journal: Am J Pathol
Title: Sperm-associated antigen 4, a novel hypoxia-inducible factor 1 target, regulates cytokinesis, and its expression correlates with the prognosis of renal cell carcinoma.
Volume: 182
Issue: 6
Pages: 2191-203
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Publication
23818324 | -
First Author: Knaup KX
Year: 2014
Journal: Mol Carcinog
Title: Hypoxia regulates the sperm associated antigen 4 (SPAG4) via HIF, which is expressed in renal clear cell carcinoma and promotes migration and invasion in vitro.
Volume: 53
Issue: 12
Pages: 970-8
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Protein Domain
IPR027776 | SPAG4/SUN4
Type: Family
Description: Sperm-associated antigen 4 protein (SPAG4, also known as SUN4) is a SUN domain containing protein that was originally isolated from the testis []. It binds outer dense-fibre protein Odf1 and localises to microtubules of manchette and axoneme []. SPAG4 was later found expressed ubiquitously in various normal tissues and neoplastic tissues in humans at the mRNA level []. In renal cell carcinoma, SPAG4 is an independent prognostic factor and plays a crucial role in cytokinesis to defend against hypoxia-induced tetraploid formation []. It also promotes renal clear cell carcinoma migration and invasion in vitro [].This entry represents SPAG4 from mammals.
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Publication
38038747 | J:344445
First Author: Ma Y
Year: 2023
Journal: Cell Mol Life Sci
Title: CCDC146 is required for sperm flagellum biogenesis and male fertility in mice.
Volume: 81
Issue: 1
Pages: 1
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Protein
F6S430
Organism: Mus musculus/domesticus
Length: 78  
Fragment?: true
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Protein
Q8BLQ4
Organism: Mus musculus/domesticus
Length: 103  
Fragment?: false
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Protein
Q3B7Z4
Organism: Mus musculus/domesticus
Length: 169  
Fragment?: true
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Protein
B7ZCP3
Organism: Mus musculus/domesticus
Length: 210  
Fragment?: true
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Protein
Q9JJF2
Organism: Mus musculus/domesticus
Length: 443  
Fragment?: false
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Protein
Q5DTM6
Organism: Mus musculus/domesticus
Length: 248  
Fragment?: true
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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