| Type |
Details |
Score |
| Gene |
| Type: |
gene |
| Organism: |
human |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
frog, western clawed |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7712147 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2024-08-27 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7712860 |
| Age: |
postnatal day 30 |
| Image: |
1 |
|
| Specimen Label: |
Pcdha6 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
926
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus caroli |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7489699 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-06-14 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689421 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:7489722 |
| Age: |
embryonic day 13.5 |
|
|
| Specimen Label: |
WT |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7489699 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-06-14 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689421 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:7489722 |
| Age: |
embryonic day 13.5 |
|
|
| Specimen Label: |
Dnmt3b-KO |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7711021 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2024-08-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691022 |
|
| Stage: |
TS22 |
| Assay Id: |
MGI:7711198 |
| Age: |
embryonic day 14.0 |
| Image: |
1 |
|
| Specimen Label: |
control |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7711021 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2024-08-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691022 |
|
| Stage: |
TS22 |
| Assay Id: |
MGI:7711198 |
| Age: |
embryonic day 14.0 |
| Image: |
1 |
|
| Specimen Label: |
CtcfNesCre |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3276828 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1778728 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754428 |
| Pattern: |
Uniform |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3522128 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3284528 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Very strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3522328 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3560828 |
| Pattern: |
Uniform |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3626297 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3560828 |
| Pattern: |
Single cells |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628658 |
| Age: |
postnatal |
|
| Note: |
Individual neurons are labeled. |
| Specimen Label: |
8B |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3277028 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3560928 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3626297 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3560928 |
| Pattern: |
Single cells |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628658 |
| Age: |
postnatal |
|
| Note: |
Individual neurons are labeled. |
| Specimen Label: |
8B |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3626297 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280928 |
| Pattern: |
Single cells |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628670 |
| Age: |
postnatal |
|
| Note: |
Individual neurons are labeled. |
| Specimen Label: |
8J,L |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3527628 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Very strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3521728 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1303412 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-10 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3561128 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628596 |
| Age: |
postnatal adult |
|
|
| Specimen Label: |
7C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3626297 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-07-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3561128 |
| Pattern: |
Single cells |
| Stage: |
TS28 |
| Assay Id: |
MGI:3628658 |
| Age: |
postnatal |
|
| Note: |
Individual neurons are labeled. |
| Specimen Label: |
8B |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Sugino H |
| Year: |
2000 |
| Journal: |
Genomics |
| Title: |
Genomic organization of the family of CNR cadherin genes in mice and humans. |
| Volume: |
63 |
| Issue: |
1 |
| Pages: |
75-87 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kohmura N |
| Year: |
1998 |
| Journal: |
Neuron |
| Title: |
Diversity revealed by a novel family of cadherins expressed in neurons at a synaptic complex. |
| Volume: |
20 |
| Issue: |
6 |
| Pages: |
1137-51 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carroll P |
| Year: |
2001 |
| Journal: |
Mol Cell Neurosci |
| Title: |
Juxtaposition of CNR protocadherins and reelin expression in the developing spinal cord. |
| Volume: |
17 |
| Issue: |
4 |
| Pages: |
611-23 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Esumi S |
| Year: |
2005 |
| Journal: |
Nat Genet |
| Title: |
Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons. |
| Volume: |
37 |
| Issue: |
2 |
| Pages: |
171-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Senzaki K |
| Year: |
1999 |
| Journal: |
Cell |
| Title: |
Proteins of the CNR family are multiple receptors for Reelin. |
| Volume: |
99 |
| Issue: |
6 |
| Pages: |
635-47 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Morishita H |
| Year: |
2004 |
| Journal: |
Neuroreport |
| Title: |
CNR/Pcdhalpha family in subplate neurons, and developing cortical connectivity. |
| Volume: |
15 |
| Issue: |
17 |
| Pages: |
2595-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Toyoda S |
| Year: |
2014 |
| Journal: |
Neuron |
| Title: |
Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity. |
| Volume: |
82 |
| Issue: |
1 |
| Pages: |
94-108 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fan L |
| Year: |
2018 |
| Journal: |
Elife |
| Title: |
Alpha protocadherins and Pyk2 kinase regulate cortical neuron migration and cytoskeletal dynamics via Rac1 GTPase and WAVE complex in mice. |
| Volume: |
7 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Murata Y |
| Year: |
2004 |
| Journal: |
J Biol Chem |
| Title: |
Interaction with protocadherin-gamma regulates the cell surface expression of protocadherin-alpha. |
| Volume: |
279 |
| Issue: |
47 |
| Pages: |
49508-16 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mancia Leon WR |
| Year: |
2020 |
| Journal: |
Elife |
| Title: |
Clustered gamma-protocadherins regulate cortical interneuron programmed cell death. |
| Volume: |
9 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gendrel AV |
| Year: |
2013 |
| Journal: |
Mol Cell Biol |
| Title: |
Epigenetic functions of smchd1 repress gene clusters on the inactive X chromosome and on autosomes. |
| Volume: |
33 |
| Issue: |
16 |
| Pages: |
3150-65 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Elbert A |
| Year: |
2019 |
| Journal: |
J Neurosci |
| Title: |
CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons. |
| Volume: |
39 |
| Issue: |
1 |
| Pages: |
177-192 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Mouse Synonym Curation |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
|
| Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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|
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•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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| Publication |
| First Author: |
Gerhard DS |
| Year: |
2004 |
| Journal: |
Genome Res |
| Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
| Volume: |
14 |
| Issue: |
10B |
| Pages: |
2121-7 |
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