|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 1 to 94 out of 94 for Pgbd5

0.018s

Categories

Hits by Category

Hits by Strain

Type Details Score
Gene
79605 | PGBD5
Type: gene
Organism: human
•
•
•
•
•
Gene
100488440 | pgbd5
Type: gene
Organism: frog, western clawed
•
•
•
•
•
Gene
292098 | Pgbd5
Type: gene
Organism: rat
•
•
•
•
•
Gene
100855465 | PGBD5
Type: gene
Organism: dog, domestic
•
•
•
•
•
Gene
101057280 | PGBD5
Type: gene
Organism: chimpanzee
•
•
•
•
•
Gene
421541 | PGBD5
Type: gene
Organism: chicken
•
•
•
•
•
Gene
570182 | pgbd5
Type: gene
Organism: zebrafish
•
•
•
•
•
Gene
719275 | PGBD5
Type: gene
Organism: macaque, rhesus
•
•
•
•
•
Gene
101907907 | PGBD5
Type: gene
Organism: cattle
•
•
•
•
•
Protein Coding Gene
MGI:2429955 | Pgbd5
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Domain
IPR042423 | PGBD5
Type: Family
Description: PiggyBac transposable element-derived protein 5 (PGBD5) is a DNA transposase that mediates PGBD5-induced DNA rearrangements in rhabdoid tumour cells []. It can induce genomic rearrangements that inactivate the HPRT1 gene [].
•
•
•
•
•
Publication
28504702 | -
First Author: Henssen AG
Year: 2017
Journal: Nat Genet
Title: PGBD5 promotes site-specific oncogenic mutations in human tumors.
Volume: 49
Issue: 7
Pages: 1005-1014
•
•
•
•
•
Protein
D3YZI9
Organism: Mus musculus/domesticus
Length: 523  
Fragment?: false
•
•
•
•
•
Protein
A0A510C1L5
Organism: Mus musculus/domesticus
Length: 409  
Fragment?: false
•
•
•
•
•
Protein
A0A5H2QVU1
Organism: Mus musculus/domesticus
Length: 132  
Fragment?: true
•
•
•
•
•
Protein
G3UX58
Organism: Mus musculus/domesticus
Length: 432  
Fragment?: false
•
•
•
•
•
Publication
27491780 | -
 
First Author: Henssen AG
Year: 2016
Journal: BMC Genomics
Title: Forward genetic screen of human transposase genomic rearrangements.
Volume: 17
Pages: 548
•
•
•
•
•
Publication
24180413 | J:268031
First Author: Pavelitz T
Year: 2013
Journal: Mob DNA
Title: PGBD5: a neural-specific intron-containing piggyBac transposase domesticated over 500 million years ago and conserved from cephalochordates to humans.
Volume: 4
Issue: 1
Pages: 23
•
•
•
•
•
Publication
37163102 | J:335226
     
First Author: Zapater LJ
Year: 2023
Journal: bioRxiv
Title: A transposase-derived gene required for human brain development.
•
•
•
•
•
Publication
38517960 | J:346387
First Author: Yamada M
Year: 2024
Journal: Sci Adv
Title: Childhood cancer mutagenesis caused by transposase-derived PGBD5.
Volume: 10
Issue: 12
Pages: eadn4649
•
•
•
•
•
Protein Coding Gene
MGP_CAROLIEiJ_G0031704 | -
Type: protein_coding_gene
Organism: Mus caroli
•
•
•
•
•
Protein Coding Gene
MGP_129S1SvImJ_G0034270 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_AJ_G0034250 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_AKRJ_G0034177 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_BALBcJ_G0034243 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_C3HHeJ_G0033954 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGI_C57BL6J_2429955 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_C57BL6NJ_G0034763 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_CASTEiJ_G0033281 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_CBAJ_G0033927 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_DBA2J_G0034083 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_FVBNJ_G0034027 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_LPJ_G0034172 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_NODShiLtJ_G0034074 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_NZOHlLtJ_G0034782 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_PWKPhJ_G0032983 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_WSBEiJ_G0033398 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_PahariEiJ_G0023302 | -
Type: protein_coding_gene
Organism: Mus pahari
•
•
•
•
•
Protein Coding Gene
MGP_SPRETEiJ_G0032822 | -
Type: protein_coding_gene
Organism: Mus spretus
•
•
•
•
•
Publication
8889548 | J:80162
First Author: Bonaldo MF
Year: 1996
Journal: Genome Res
Title: Normalization and subtraction: two approaches to facilitate gene discovery.
Volume: 6
Issue: 9
Pages: 791-806
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6379451
Assay Type: Western blot
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:6379539
Age: postnatal adult
Specimen Label: whole brain
Detected: true
Specimen Num: 7
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6379451
Assay Type: Western blot
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:6379539
Age: postnatal adult
Specimen Label: 5ul E1
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6379451
Assay Type: Western blot
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:6379539
Age: postnatal adult
Specimen Label: 5ul E2
Detected: true
Specimen Num: 4
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6379451
Assay Type: Western blot
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:6379539
Age: postnatal adult
Specimen Label: 25ul E1
Detected: true
Specimen Num: 5
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6379451
Assay Type: Western blot
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:6379539
Age: postnatal adult
Specimen Label: 25ul E2
Detected: true
Specimen Num: 6
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6379451
Assay Type: Western blot
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689428
Stage: TS28
Assay Id: MGI:6379540
Age: postnatal adult
Specimen Label: whole brain
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1755022
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5C
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6180478
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Absent
Sex: Male
Emaps: EMAPS:1755028
Stage: TS28
Assay Id: MGI:6379529
Age: postnatal day 56
Specimen Label: 5A
Detected: false
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1753622
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5C
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
     
Probe: MGI:6180478
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Absent
Sex: Male
Emaps: EMAPS:1753628
Stage: TS28
Assay Id: MGI:6379529
Age: postnatal day 56
Specimen Label: 5A
Detected: false
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1778722
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5B
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1778722
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5C
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1778722
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5D
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3284522
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5B
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3284522
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5C
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:4424835
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3284522
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6379530
Age: embryonic day 14.5
Specimen Label: 5D
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:6180478
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Male
Emaps: EMAPS:3540628
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6379529
Age: postnatal day 56
Specimen Label: 5A
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:6180478
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Male
Emaps: EMAPS:3560928
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6379529
Age: postnatal day 56
Specimen Label: 5A
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:6180478
Assay Type: RNA in situ
Annotation Date: 2019-12-07
Strength: Present
Sex: Male
Emaps: EMAPS:3521728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6379529
Age: postnatal day 56
Specimen Label: 5A
Detected: true
Specimen Num: 1
•
•
•
•
•
Publication
26624618 | J:232147
First Author: Isbel L
Year: 2015
Journal: PLoS Genet
Title: Trim33 Binds and Silences a Class of Young Endogenous Retroviruses in the Mouse Testis; a Novel Component of the Arms Race between Retrotransposons and the Host Genome.
Volume: 11
Issue: 12
Pages: e1005693
•
•
•
•
•
Publication
- | J:101977
     
First Author: The Jackson Laboratory
Year: 2005
Journal: Unpublished
Title: Information obtained from The Jackson Laboratory, Bar Harbor, ME
•
•
•
•
•
Publication
- | J:237616
     
First Author: MGI and IMPC
Year: 2017
Journal: MGI Direct Data Submission
Title: MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC)
•
•
•
•
•
Publication
- | J:148605
     
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
•
•
•
•
•
Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
•
•
•
•
•
Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
•
•
•
•
•
Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
•
•
•
•
•
Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
•
•
•
•
•
Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
•
•
•
•
•
Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
•
•
•
•
•
Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
•
•
•
•
•
Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
•
•
•
•
•
Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Publication
29093183 | J:245989
 
First Author: Henssen AG
Year: 2017
Journal: Sci Transl Med
Title: Therapeutic targeting of PGBD5-induced DNA repair dependency in pediatric solid tumors.
Volume: 9
Issue: 414
•
•
•
•
•
Publication
- | J:327825
     
First Author: Keller R
Year: 2022
Journal: bioRxiv
Title: Childhood cancer mutagenesis caused by a domesticated DNA transposase
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom