Type |
Details |
Score |
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Chang JC |
Year: |
2013 |
Journal: |
Dev Cell |
Title: |
Prdm13 mediates the balance of inhibitory and excitatory neurons in somatosensory circuits. |
Volume: |
25 |
Issue: |
2 |
Pages: |
182-95 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mona B |
Year: |
2017 |
Journal: |
Elife |
Title: |
Repression by PRDM13 is critical for generating precision in neuronal identity. |
Volume: |
6 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Goodson NB |
Year: |
2018 |
Journal: |
Dev Biol |
Title: |
Prdm13 is required for Ebf3+ amacrine cell formation in the retina. |
Volume: |
434 |
Issue: |
1 |
Pages: |
149-163 |
|
•
•
•
•
•
|
Publication |
First Author: |
Watanabe S |
Year: |
2015 |
Journal: |
J Neurosci |
Title: |
Prdm13 regulates subtype specification of retinal amacrine interneurons and modulates visual sensitivity. |
Volume: |
35 |
Issue: |
20 |
Pages: |
8004-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tsuji S |
Year: |
2023 |
Journal: |
Life Sci Alliance |
Title: |
Sleep-wake patterns are altered with age, Prdm13 signaling in the DMH, and diet restriction in mice. |
Volume: |
6 |
Issue: |
6 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Whittaker DE |
Year: |
2021 |
Journal: |
J Clin Invest |
Title: |
A recessive PRDM13 mutation results in congenital hypogonadotropic hypogonadism and cerebellar hypoplasia. |
Volume: |
131 |
Issue: |
24 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hanotel J |
Year: |
2014 |
Journal: |
Dev Biol |
Title: |
The Prdm13 histone methyltransferase encoding gene is a Ptf1a-Rbpj downstream target that suppresses glutamatergic and promotes GABAergic neuronal fate in the dorsal neural tube. |
Volume: |
386 |
Issue: |
2 |
Pages: |
340-57 |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Publication |
First Author: |
Satoh A |
Year: |
2015 |
Journal: |
Aging Cell |
Title: |
Deficiency of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity. |
Volume: |
14 |
Issue: |
2 |
Pages: |
209-18 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3852014 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-08-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603919 |
|
Stage: |
TS19 |
Assay Id: |
MGI:3852040 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
None |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3852014 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-08-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3185821 |
|
Stage: |
TS21 |
Assay Id: |
MGI:3852040 |
Age: |
embryonic day 13.5 |
|
|
Specimen Label: |
None |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1716824 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 16.5 |
|
|
Specimen Label: |
2J' |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1716824 |
|
Stage: |
TS24 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 16.5 |
|
|
Specimen Label: |
2J" |
Detected: |
false |
Specimen Num: |
10 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1758520 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 12.5 |
|
Note: |
Expressed in the ventricular zone in the dorsal spinal cord, with enrichment in regions lateral to the Ptf1a domain. |
Specimen Label: |
S2B' |
Detected: |
true |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1758520 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 12.5 |
|
Note: |
Reduced expression compared with the wild-type, specifically in the Ptf1a domain region. |
Specimen Label: |
S2B" |
Detected: |
true |
Specimen Num: |
14 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1758520 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 12.5 |
|
Note: |
Reduced expression compared with that of E11.5. Expressed in the ventricular zone in the dorsal spinal cord. |
Specimen Label: |
S2H |
Detected: |
true |
Specimen Num: |
19 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1758521 |
Pattern: |
Regionally restricted |
Stage: |
TS21 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 13.5 |
|
Note: |
Reduced expression compared with that of E11.5. Expressed in the ventricular zone in the dorsal spinal cord. |
Specimen Label: |
S2I |
Detected: |
true |
Specimen Num: |
20 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1758522 |
Pattern: |
Regionally restricted |
Stage: |
TS22 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was almost gone. Expressed in a small area in the ventricular zone in the dorsal spinal cord. |
Specimen Label: |
S2J |
Detected: |
true |
Specimen Num: |
21 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1616617 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 10.5 |
|
Note: |
Expressed in the ventricular zone in the dorsal spinal cord, with enrichment in regions lateral to the Ptf1a domain. |
Specimen Label: |
S2A' |
Detected: |
true |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1616617 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 10.5 |
|
Note: |
Reduced expression compared with the wild-type, specifically in the Ptf1a domain region. |
Specimen Label: |
S2A" |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1616614 |
Pattern: |
Regionally restricted |
Stage: |
TS14 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 9.0 |
|
Note: |
Expressed in the ventricular zone in the dorsal spinal cord. |
Specimen Label: |
S2D |
Detected: |
true |
Specimen Num: |
15 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1616615 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 9.5 |
|
Note: |
Expressed in the ventricular zone in the dorsal spinal cord, with enrichment in regions lateral to the Ptf1a domain. |
Specimen Label: |
S2E |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1616617 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 10.5 |
|
Note: |
Expressed in the ventricular zone in the dorsal spinal cord, with enrichment in regions lateral to the Ptf1a domain. |
Specimen Label: |
S2F |
Detected: |
true |
Specimen Num: |
17 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689619 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
Note: |
Expressed in a subset of cells. |
Specimen Label: |
2G' |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689619 |
|
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
2G" |
Detected: |
false |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689619 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
Note: |
Expressed in a subset of cells. |
Specimen Label: |
2H' |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689619 |
|
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
2H" |
Detected: |
false |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1750324 |
|
Stage: |
TS24 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 16.5 |
|
|
Specimen Label: |
not shown |
Detected: |
false |
Specimen Num: |
22 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3852021 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-08-05 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1609215 |
Pattern: |
Not Specified |
Stage: |
TS15 |
Assay Id: |
MGI:3852047 |
Age: |
embryonic day 9.5 |
Image: |
2C |
|
Specimen Label: |
2C |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3852021 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-08-05 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1609217 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:3852047 |
Age: |
embryonic day 10.5 |
Image: |
2F |
|
Specimen Label: |
2F |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3852021 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-08-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1715219 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:3852047 |
Age: |
embryonic day 11.5 |
Image: |
3F |
Note: |
Expression was detected in the ventricular zone of the dorsal spinal cord. |
Specimen Label: |
3F |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3852021 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-08-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1715219 |
Pattern: |
Non-Uniform |
Stage: |
TS19 |
Assay Id: |
MGI:3852047 |
Age: |
embryonic day 11.5 |
Image: |
3O |
Note: |
Expression was detected throughout the ventricular zone of the dorsal spinal cord but was highest in the cells at the ventricular zone lateral margin. |
Specimen Label: |
3O |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1715219 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
Note: |
Expressed in the ventricular zone in dorsal spinal cord. Expressed more broadly in the ventricular zone than Ptf1a. |
Specimen Label: |
2I' |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1715219 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
Note: |
Reduced expression compared with the wild-type, specifically in the Ptf1a domain region. |
Specimen Label: |
2I" |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1715219 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
Note: |
Expressed in the ventricular zone in the dorsal spinal cord, with enrichment in regions lateral to the Ptf1a domain. |
Specimen Label: |
S2G |
Detected: |
true |
Specimen Num: |
18 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1707419 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
2F' |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7580780 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-08 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1707419 |
|
Stage: |
TS19 |
Assay Id: |
MGI:7580782 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
2F" |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yu H |
Year: |
2022 |
Journal: |
Elife |
Title: |
Developmental single-cell transcriptomics of hypothalamic POMC neurons reveal the genetic trajectories of multiple neuropeptidergic phenotypes. |
Volume: |
11 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Kinameri E |
Year: |
2008 |
Journal: |
PLoS One |
Title: |
Prdm proto-oncogene transcription factor family expression and interaction with the Notch-Hes pathway in mouse neurogenesis. |
Volume: |
3 |
Issue: |
12 |
Pages: |
e3859 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamamoto H |
Year: |
2020 |
Journal: |
Cell Rep |
Title: |
Functional and Evolutionary Diversification of Otx2 and Crx in Vertebrate Retinal Photoreceptor and Bipolar Cell Development. |
Volume: |
30 |
Issue: |
3 |
Pages: |
658-671.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu M |
Year: |
2021 |
Journal: |
Invest Ophthalmol Vis Sci |
Title: |
Elavl2 Regulates Retinal Function Via Modulating the Differentiation of Amacrine Cells Subtype. |
Volume: |
62 |
Issue: |
7 |
Pages: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wutikeli H |
Year: |
2024 |
Journal: |
Biochim Biophys Acta Mol Basis Dis |
Title: |
Role of Elavl-like RNA-binding protein in retinal development and signal transduction. |
Volume: |
1871 |
Issue: |
1 |
Pages: |
167518 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
MGC Data curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI and IMPC |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
Journal: |
Database Download |
Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Publication |
First Author: |
Bowne SJ |
Year: |
2016 |
Journal: |
Mol Vis |
Title: |
North Carolina macular dystrophy (MCDR1) caused by a novel tandem duplication of the PRDM13 gene. |
Volume: |
22 |
|
Pages: |
1239-1247 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the PR/SET domain found in PR domain zinc finger protein 13 (PRDM13). PRDM13 mediates the balance of inhibitory and excitatory neurons in somatosensory circuits []. It is also required to achieve precise neuronal specification during mouse development []. The duplication of PRMD13 causes North Carolina macular dystrophy [].The PRDM family members are characterised by the presence of a N-terminal PR (PRDI-BF1 and RIZ1 homology) domain followed by multiple zinc fingers which confer DNA binding activity. PR domains are only distantly related to the classical SET methyltransferase domains []. They are involved in epigenetic regulation of gene expression through their intrinsic histone methyltransferase activity or via interactions with other chromatin modifying enzymes []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
754
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu H |
Year: |
2013 |
Journal: |
Cell Rep |
Title: |
Molecular basis for the regulation of the H3K4 methyltransferase activity of PRDM9. |
Volume: |
5 |
Issue: |
1 |
Pages: |
13-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Casamassimi A |
Year: |
2020 |
Journal: |
Int J Mol Sci |
Title: |
Multifaceted Role of PRDM Proteins in Human Cancer. |
Volume: |
21 |
Issue: |
7 |
|
|
•
•
•
•
•
|