Type |
Details |
Score |
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Azen EA |
Year: |
2000 |
Journal: |
Cytogenet Cell Genet |
Title: |
Assignment of the proline-rich protein gene Prp2 (alias D6Mit13) to mouse chromosome 6G1 by in situ hybridization. |
Volume: |
89 |
Issue: |
1-2 |
Pages: |
14-5 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Ann DK |
Year: |
1988 |
Journal: |
J Biol Chem |
Title: |
Molecular evolution of the mouse proline-rich protein multigene family. Insertion of a long interspersed repeated DNA element. |
Volume: |
263 |
Issue: |
22 |
Pages: |
10887-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ann DK |
Year: |
1985 |
Journal: |
J Biol Chem |
Title: |
The structure and organization of a proline-rich protein gene of a mouse multigene family. |
Volume: |
260 |
Issue: |
29 |
Pages: |
15863-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Clements S |
Year: |
1985 |
Journal: |
J Biol Chem |
Title: |
Novel multigene families encoding highly repetitive peptide sequences. Sequence analyses of rat and mouse proline-rich protein cDNAs. |
Volume: |
260 |
Issue: |
25 |
Pages: |
13471-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Roberts SG |
Year: |
1991 |
Journal: |
Eur J Biochem |
Title: |
Gene sequence of mouse B-type proline-rich protein MP4. Transcriptional start point and an upstream phylogenetic footprint with ets-like and rel/NFkB-like elements. |
Volume: |
202 |
Issue: |
3 |
Pages: |
969-74 |
|
•
•
•
•
•
|
Publication |
First Author: |
University of California, Davis |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the University of California, Davis |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Function or Process or Component Unknown following Literature Review |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
289
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu YC |
Year: |
2007 |
Journal: |
Mol Cell Biol |
Title: |
A novel splicing factor, Yju2, is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing. |
Volume: |
27 |
Issue: |
15 |
Pages: |
5403-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bai R |
Year: |
2021 |
Journal: |
Science |
Title: |
Mechanism of spliceosome remodeling by the ATPase/helicase Prp2 and its coactivator Spp2. |
Volume: |
371 |
Issue: |
6525 |
|
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Spp2 is a yeast G-patch protein and spliceosome component that interacts with the ATP-dependent DExH-box splicing factor Prp2 []. This interaction involves the G-patch sequence in Spp2 and is required for the recruitment of Prp2 to the spliceosome before the first catalytic step of splicing. It has been proposed that Spp2 might be an accessory factor that confers spliceosome specificity on Prp2 [].Proteins containing this G-patch domain also include the plant MOS2 protein, which is required for innate and induced resistance to pathogens, and MOS2 homologues from Metazoa []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Spp2 is a yeast G-patch protein and spliceosome component that interacts with the ATP-dependent DExH-box splicing factor Prp2 []. This interaction involves the G-patch sequence in Spp2 and is required for the recruitment of Prp2 to the spliceosome before the first catalytic step of splicing. It has been proposed that Spp2 might be an accessory factor that confers spliceosome specificity on Prp2 [].This entry also includes the plant MOS2 protein required for innate and induced resistance to pathogens, and MOS2 homologues from Metazoa []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Boon KL |
Year: |
2006 |
Journal: |
Mol Cell Biol |
Title: |
Yeast ntr1/spp382 mediates prp43 function in postspliceosomes. |
Volume: |
26 |
Issue: |
16 |
Pages: |
6016-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Silverman EJ |
Year: |
2004 |
Journal: |
Mol Cell Biol |
Title: |
Interaction between a G-patch protein and a spliceosomal DEXD/H-box ATPase that is critical for splicing. |
Volume: |
24 |
Issue: |
23 |
Pages: |
10101-10 |
|
•
•
•
•
•
|
Publication |
First Author: |
Khalifé M |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Transcriptomic analysis brings new insight into the biological role of the prion protein during mouse embryogenesis. |
Volume: |
6 |
Issue: |
8 |
Pages: |
e23253 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang Y |
Year: |
2005 |
Journal: |
Curr Biol |
Title: |
MOS2, a protein containing G-patch and KOW motifs, is essential for innate immunity in Arabidopsis thaliana. |
Volume: |
15 |
Issue: |
21 |
Pages: |
1936-42 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Splicing by the spliceosome involves branching and exon ligation. The branching reaction leads to the formation of the catalytic step I spliceosome (C complex). This entry includes budding yeast Yuj2 and its human homologue, CCDC94. They are part of the C complex []. Yju2 is a splicing factor associated with the Prp19-associated complex and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
385
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
355
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
69
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry includes Probable splicing factor YJU2B (also known as CCDC130) and Splicing factor YJU2 (also known as CCDC94) from humans, Saf4 from fission yeasts and Yju2 from budding yeasts. Saf4 (also known as cwc16) is involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome []. Yju2 is a splicing factor that is associated with the Prp19-associated complex and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing. It may play a role in stabilizing the structure of the spliceosome catalytic core [, ]. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
314
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
256
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
190
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
488
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhan X |
Year: |
2018 |
Journal: |
Science |
Title: |
Structure of a human catalytic step I spliceosome. |
Volume: |
359 |
Issue: |
6375 |
Pages: |
537-545 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ohi MD |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs. |
Volume: |
22 |
Issue: |
7 |
Pages: |
2011-24 |
|
•
•
•
•
•
|