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Search results 1 to 88 out of 88 for Purb

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Categories

Hits by Strain

Hits by Category

Type Details Score
Gene
5814 | PURB
Type: gene
Organism: human
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Gene
472357 | PURB
Type: gene
Organism: chimpanzee
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Gene
504276 | PURB
Type: gene
Organism: cattle
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Gene
705519 | PURB
Type: gene
Organism: macaque, rhesus
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Gene
100495008 | purb
Type: gene
Organism: frog, western clawed
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Gene
106558494 | PURB
Type: gene
Organism: dog, domestic
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Gene
498407 | Purb
Type: gene
Organism: rat
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Protein Coding Gene
MGI:1338779 | Purb
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
23723417 | J:199178
First Author: Maamar H
Year: 2013
Journal: Genes Dev
Title: linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis.
Volume: 27
Issue: 11
Pages: 1260-71
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Protein Coding Gene
MGP_CAROLIEiJ_G0016075 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0018024 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0017997 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0017961 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0017965 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0017778 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1338779 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0018417 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0017340 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0017753 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0017863 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0017855 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0017934 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0017881 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0018457 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0017120 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0017394 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0016816 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0016917 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
17906292 | J:128995
First Author: Knapp AM
Year: 2007
Journal: J Biol Chem
Title: Structure-function analysis of mouse Pur beta II. Conformation altering mutations disrupt single-stranded DNA and protein interactions crucial to smooth muscle alpha-actin gene repression.
Volume: 282
Issue: 49
Pages: 35899-909
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GXD Expression
GXD Expression
     
Probe: MGI:6491307
Assay Type: Western blot
Annotation Date: 2021-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610528
Stage: TS28
Assay Id: MGI:6491532
Age: postnatal adult
Specimen Label: WT
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:6491307
Assay Type: Western blot
Annotation Date: 2021-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610528
Stage: TS28
Assay Id: MGI:6491532
Age: postnatal adult
Specimen Label: WT
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:6491307
Assay Type: Western blot
Annotation Date: 2021-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610528
Stage: TS28
Assay Id: MGI:6491532
Age: postnatal adult
Specimen Label: KO
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:6491307
Assay Type: Western blot
Annotation Date: 2021-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610528
Stage: TS28
Assay Id: MGI:6491532
Age: postnatal adult
Specimen Label: KO
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
     
Probe: MGI:6491290
Assay Type: RT-PCR
Annotation Date: 2021-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3604828
Stage: TS28
Assay Id: MGI:6491545
Age: postnatal
Specimen Label: WT
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:6491290
Assay Type: RT-PCR
Annotation Date: 2021-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3604828
Stage: TS28
Assay Id: MGI:6491545
Age: postnatal
Specimen Label: dKO
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:6491290
Assay Type: RT-PCR
Annotation Date: 2021-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3604828
Stage: TS28
Assay Id: MGI:6491545
Age: postnatal
Specimen Label: WT
Detected: true
Specimen Num: 3
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Publication
9334258 | J:53004
First Author: Kelm RJ Jr
Year: 1997
Journal: J Biol Chem
Title: Sequence of cDNAs encoding components of vascular actin single-stranded DNA-binding factor 2 establish identity to Puralpha and Purbeta.
Volume: 272
Issue: 42
Pages: 26727-33
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Publication
12933792 | J:114102
First Author: Gupta M
Year: 2003
Journal: J Biol Chem
Title: Single-stranded DNA-binding proteins PURalpha and PURbeta bind to a purine-rich negative regulatory element of the alpha-myosin heavy chain gene and control transcriptional and translational regulation of the gene expression. Implications in the repression of alpha-myosin heavy chain during heart failure.
Volume: 278
Issue: 45
Pages: 44935-48
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Publication
31918924 | J:343120
 
First Author: Jia L
Year: 2020
Journal: Mol Metab
Title: Purβ promotes hepatic glucose production by increasing Adcy6 transcription.
Volume: 31
Pages: 85-97
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Publication
10471324 | J:57605
First Author: Yano H
Year: 1999
Journal: Exp Cell Res
Title: Identification of (CAG)(n) and (CGG)(n) repeat-binding proteins, CAGERs expressed in mature neurons of the mouse brain.
Volume: 251
Issue: 2
Pages: 388-400
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Publication
15777841 | J:97585
First Author: Wortman MJ
Year: 2005
Journal: Biochim Biophys Acta
Title: Mechanism of DNA binding and localized strand separation by Pur alpha and comparison with Pur family member, Pur beta.
Volume: 1743
Issue: 1-2
Pages: 64-78
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Publication
23724822 | J:203492
First Author: Rumora AE
Year: 2013
Journal: Biochemistry
Title: Structural basis of multisite single-stranded DNA recognition and ACTA2 repression by purine-rich element binding protein B (Purβ).
Volume: 52
Issue: 26
Pages: 4439-50
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Publication
27064749 | J:343118
First Author: Rumora AE
Year: 2016
Journal: Biochemistry
Title: Electrostatic and Hydrophobic Interactions Mediate Single-Stranded DNA Recognition and Acta2 Repression by Purine-Rich Element-Binding Protein B.
Volume: 55
Issue: 19
Pages: 2794-805
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Publication
10318844 | J:55001
First Author: Kelm RJ Jr
Year: 1999
Journal: J Biol Chem
Title: Molecular interactions between single-stranded DNA-binding proteins associated with an essential MCAT element in the mouse smooth muscle alpha-actin promoter.
Volume: 274
Issue: 20
Pages: 14238-45
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Publication
33743134 | J:343405
First Author: Ferris LA
Year: 2021
Journal: Mol Cell Biochem
Title: Purine-rich element binding protein B attenuates the coactivator function of myocardin by a novel molecular mechanism of smooth muscle gene repression.
Volume: 476
Issue: 8
Pages: 2899-2916
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Publication
16436378 | J:110588
First Author: Knapp AM
Year: 2006
Journal: J Biol Chem
Title: Nucleoprotein interactions governing cell type-dependent repression of the mouse smooth muscle alpha-actin promoter by single-stranded DNA-binding proteins Pur alpha and Pur beta.
Volume: 281
Issue: 12
Pages: 7907-18
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Publication
18344281 | J:134065
First Author: Zhang A
Year: 2008
Journal: Am J Physiol Cell Physiol
Title: Serum response factor neutralizes Pur alpha- and Pur beta-mediated repression of the fetal vascular smooth muscle alpha-actin gene in stressed adult cardiomyocytes.
Volume: 294
Issue: 3
Pages: C702-14
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Publication
19922871 | J:155756
First Author: van Rooij E
Year: 2009
Journal: Dev Cell
Title: A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance.
Volume: 17
Issue: 5
Pages: 662-73
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Publication
15282343 | J:94649
First Author: Subramanian SV
Year: 2004
Journal: Mol Biol Cell
Title: Induction of vascular smooth muscle alpha-actin gene transcription in transforming growth factor beta1-activated myofibroblasts mediated by dynamic interplay between the Pur repressor proteins and Sp1/Smad coactivators.
Volume: 15
Issue: 10
Pages: 4532-43
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Publication
20194497 | J:162596
First Author: Tsika RW
Year: 2010
Journal: J Biol Chem
Title: TEAD-1 overexpression in the mouse heart promotes an age-dependent heart dysfunction.
Volume: 285
Issue: 18
Pages: 13721-35
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Publication
19723774 | J:155773
First Author: Tkatchenko TV
Year: 2009
Journal: Physiol Genomics
Title: Lack of periostin leads to suppression of Notch1 signaling and calcific aortic valve disease.
Volume: 39
Issue: 3
Pages: 160-8
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Publication
- | J:29126
     
First Author: The Jackson Laboratory DNA Panel Mapping Resource
Year: 1999
Journal: Database Release
Title: JAX Interspecific Backcross BSS and BSB Public Mapping Data
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Publication
9371744 | J:44483
First Author: Brady KP
Year: 1997
Journal: Genome Res
Title: Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis.
Volume: 7
Issue: 11
Pages: 1085-93
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Publication
- | J:81858
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: Data Curation Using Mouse Genome Assembly
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Publication
- | J:346132
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2016
Title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:155856
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Rat to Mouse ISO GO annotation transfer
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
1729205 | -
First Author: He B
Year: 1992
Journal: J Bacteriol
Title: Escherichia coli purB gene: cloning, nucleotide sequence, and regulation by purR.
Volume: 174
Issue: 1
Pages: 130-6
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Publication
8530047 | J:28026
First Author: Wong LJ
Year: 1995
Journal: Genomics
Title: Characterization of the cDNA and the gene encoding murine adenylosuccinate lyase.
Volume: 28
Issue: 2
Pages: 341-3
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Protein Domain
IPR013539 | PurB_C
Type: Domain
Description: This domain is found at the C terminus of adenylosuccinate lyase (ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain . ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate [].
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Publication
33926955 | -
First Author: Sleiman D
Year: 2021
Journal: Science
Title: A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes.
Volume: 372
Issue: 6541
Pages: 516-520
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Protein Domain
IPR046383 | Phage_PurZ
Type: Family
Description: This family includes N6-succino-2-amino-2'-deoxyadenylate synthase PurZ from phages. It is involved in the synthesis of the atypical nucleotide dZTP (2-amino-2'-deoxyadenosine-5'-triphosphate) and in the synthesis of N6-succino-2-amino-2'-deoxyadenylate, which undergoes defumarylation and phosphorylation respectively by host PurB and guanylate/nucleoside diphosphate kinases to give dZTP (2-amino-2'-deoxyadenosine-5'-triphosphate). dZTP is integrated into the viral genome instead of adenine by the viral polymerase. This Z-base probably completely replaces adenosine and forms a triple bond to the opposite T-base. The resulting non-standard viral DNA is called Z-genome. The chemically modified DNA is probably harder for the host bacteria to digest with nucleases or restriction enzymes [, ].
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Publication
36318802 | J:344873
First Author: Yang Y
Year: 2023
Journal: Stem Cells
Title: LncCMRR Plays an Important Role in Cardiac Differentiation by Regulating the Purb/Flk1 Axis.
Volume: 41
Issue: 1
Pages: 11-25
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Publication
33926954 | -
First Author: Zhou Y
Year: 2021
Journal: Science
Title: A widespread pathway for substitution of adenine by diaminopurine in phage genomes.
Volume: 372
Issue: 6541
Pages: 512-516
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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