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Search results 1 to 98 out of 98 for Rbm17

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Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Gene
84991 | RBM17
Type: gene
Organism: human
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Gene
478014 | RBM17
Type: gene
Organism: dog, domestic
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Gene
512694 | RBM17
Type: gene
Organism: cattle
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Gene
418248 | RBM17
Type: gene
Organism: chicken
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Gene
393889 | rbm17
Type: gene
Organism: zebrafish
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Gene
712996 | RBM17
Type: gene
Organism: macaque, rhesus
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Gene
448396 | rbm17
Type: gene
Organism: frog, western clawed
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Gene
291295 | Rbm17
Type: gene
Organism: rat
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Gene
450286 | RBM17
Type: gene
Organism: chimpanzee
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Protein Coding Gene
MGI:1924188 | Rbm17
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Domain
IPR040052 | RBM17
Type: Family
Description: This entry includes proteins with a G-patch domain and a RNA recognition motif domain, including mammalian splicing factor 45 (SPF45; also known as RNA-binding motif protein 17 or RBM17) and plant DNA-damage-repair/toleration protein DRT111 (also known as RSN2). SPF45 is an mRNA spliceosomal protein that is required for alternative splicing and the utilization of cryptic splice sites. The beta-110 mutation in the haemoglobin beta causes activation of a cryptic 3' splice site that is the cause of human beta-thalassemia (sickle-cell anemia) []. DRT111 is also required for pre-mRNA splicing, particularly the mRNA for receptor-like kinase SNC4, which activates the defence response to microbial pathogens in plants [].
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Publication
28007900 | J:239305
First Author: Tan Q
Year: 2016
Journal: Hum Mol Genet
Title: Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models.
Volume: 25
Issue: 23
Pages: 5083-5093
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Publication
30332651 | J:271133
First Author: De Maio A
Year: 2018
Journal: Cell Rep
Title: RBM17 Interacts with U2SURP and CHERP to Regulate Expression and Splicing of RNA-Processing Proteins.
Volume: 25
Issue: 3
Pages: 726-736.e7
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Protein
Q8JZX4
Organism: Mus musculus/domesticus
Length: 405  
Fragment?: false
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Protein
A2AP40
Organism: Mus musculus/domesticus
Length: 118  
Fragment?: true
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Publication
12015979 | -
First Author: Lallena MJ
Year: 2002
Journal: Cell
Title: Splicing regulation at the second catalytic step by Sex-lethal involves 3' splice site recognition by SPF45.
Volume: 109
Issue: 3
Pages: 285-96
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Publication
25267732 | -
First Author: Zhang Z
Year: 2014
Journal: Mol Plant
Title: Splicing of receptor-like kinase-encoding SNC4 and CERK1 is regulated by two conserved splicing factors that are required for plant immunity.
Volume: 7
Issue: 12
Pages: 1766-75
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Protein Coding Gene
MGP_CAROLIEiJ_G0023173 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0025344 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0025321 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0025290 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0025317 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0025077 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1924188 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0025759 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0024540 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0025056 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0025188 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0025150 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0025274 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0025182 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0025817 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0024291 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0024610 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0019233 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0024091 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
9731529 | J:48892
First Author: Neubauer G
Year: 1998
Journal: Nat Genet
Title: Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex.
Volume: 20
Issue: 1
Pages: 46-50
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GXD Expression
GXD Expression
     
Probe: MGI:3615144
Assay Type: RT-PCR
Annotation Date: 2006-03-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689421
Stage: TS21
Assay Id: MGI:3616856
Age: embryonic day 13.5
Specimen Label: RT-PCR E13.5 brain
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:3615144
Assay Type: RT-PCR
Annotation Date: 2006-03-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689427
Stage: TS27
Assay Id: MGI:3616856
Age: postnatal day 0
Specimen Label: RT-PCR P0 brain
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1665821
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1691621
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1691627
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1760621
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1760627
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1754921
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1754927
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1697427
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1716821
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1716827
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1753627
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1754421
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Note: Expression was absent in precortical tissue.
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Ambiguous
Sex: Not Specified
Emaps: EMAPS:1754427
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Note: Authors indicate that there was either ubiquitous or background expression.
Specimen Label: P0
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Ambiguous
Sex: Not Specified
Emaps: EMAPS:3284527
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Note: Authors indicate that there was either ubiquitous or background expression.
Specimen Label: P0
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3526286
Assay Type: RNA in situ
Annotation Date: 2005-02-14
Strength: Present
Sex: Male
Emaps: EMAPS:2909821
Pattern: Not Specified
Stage: TS21
Assay Id: MGI:3526345
Age: embryonic day 12.5
Specimen Label: not shown
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1679727
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1754027
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:3280927
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:3267921
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1757721
Stage: TS21
Assay Id: MGI:3618147
Age: embryonic day 13.5
Specimen Label: E13.5
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3615914
Assay Type: RNA in situ
Annotation Date: 2006-03-29
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1757727
Stage: TS27
Assay Id: MGI:3618147
Age: postnatal day 0
Image: P0
Specimen Label: P0
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:3526286
Assay Type: RNA in situ
Annotation Date: 2005-02-14
Strength: Present
Sex: Female
Emaps: EMAPS:1796221
Pattern: Not Specified
Stage: TS21
Assay Id: MGI:3526345
Age: embryonic day 12.5
Specimen Label: not shown
Detected: true
Specimen Num: 2
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Publication
18337722 | J:133952
First Author: Lim J
Year: 2008
Journal: Nature
Title: Opposing effects of polyglutamine expansion on native protein complexes contribute to SCA1.
Volume: 452
Issue: 7188
Pages: 713-8
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Publication
21510876 | J:172805
 
First Author: Wang Q
Year: 2011
Journal: BMC Genomics
Title: Recent acquisition of imprinting at the rodent Sfmbt2 locus correlates with insertion of a large block of miRNAs.
Volume: 12
Pages: 204
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Publication
14595844 | J:86589
First Author: McClive PJ
Year: 2003
Journal: Genesis
Title: Subtractive hybridisation screen identifies sexually dimorphic gene expression in the embryonic mouse gonad.
Volume: 37
Issue: 2
Pages: 84-90
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Publication
16033648 | J:103446
 
First Author: McKee AE
Year: 2005
Journal: BMC Dev Biol
Title: A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.
Volume: 5
Pages: 14
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Publication
- | J:345476
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2023
Title: TreeGrafter-generated GO annotations
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
17967808 | J:152068
First Author: Friedel RH
Year: 2007
Journal: Brief Funct Genomic Proteomic
Title: EUCOMM--the European conditional mouse mutagenesis program.
Volume: 6
Issue: 3
Pages: 180-5
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Publication
- | J:265051
     
First Author: MGI and IMPC
Year: 2018
Journal: Database Release
Title: MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC)
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:72247
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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HT Experiment
GSE79020 | Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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