| Type |
Details |
Score |
| Gene |
| Type: |
gene |
| Organism: |
human |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Roquin-2 is an E3 ubiquitin ligase required for ROS-induced ubiquitination and degradation of ASK1 (Apoptosis signal-regulating kinase 1) []. It also mediates mRNA deadenylation by recognising a conserved class of stem-loop RNA degradation motifs []. Its structure has been revealed [].Roquin-2 and its paralogue, Roquin-1 (Rc3h1), have been found to redundantly repress the mRNAs controlling T follicular helper cells and systemic inflammation [, ]. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Pratama A |
| Year: |
2013 |
| Journal: |
Immunity |
| Title: |
Roquin-2 shares functions with its paralog Roquin-1 in the repression of mRNAs controlling T follicular helper cells and systemic inflammation. |
| Volume: |
38 |
| Issue: |
4 |
| Pages: |
669-80 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Vogel KU |
| Year: |
2013 |
| Journal: |
Immunity |
| Title: |
Roquin paralogs 1 and 2 redundantly repress the Icos and Ox40 costimulator mRNAs and control follicular helper T cell differentiation. |
| Volume: |
38 |
| Issue: |
4 |
| Pages: |
655-68 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Leppek K |
| Year: |
2013 |
| Journal: |
Cell |
| Title: |
Roquin promotes constitutive mRNA decay via a conserved class of stem-loop recognition motifs. |
| Volume: |
153 |
| Issue: |
4 |
| Pages: |
869-81 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1187
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1187
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1125
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1187
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Maruyama T |
| Year: |
2014 |
| Journal: |
Sci Signal |
| Title: |
Roquin-2 promotes ubiquitin-mediated degradation of ASK1 to regulate stress responses. |
| Volume: |
7 |
| Issue: |
309 |
| Pages: |
ra8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Sakurai S |
| Year: |
2015 |
| Journal: |
Acta Crystallogr F Struct Biol Commun |
| Title: |
Structure of human Roquin-2 and its complex with constitutive-decay element RNA. |
| Volume: |
71 |
| Issue: |
Pt 8 |
| Pages: |
1048-54 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus caroli |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4423655 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-03-20 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3270422 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7614713 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4423655 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-03-20 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3271122 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7614713 |
| Age: |
embryonic day 14.5 |
|
| Note: |
Cortical plate expression was greater than in the intermediate zone. |
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4423655 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-03-20 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3271222 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7614713 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4423655 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-03-20 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754722 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7614713 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tavernier SJ |
| Year: |
2019 |
| Journal: |
Nat Commun |
| Title: |
A human immune dysregulation syndrome characterized by severe hyperinflammation with a homozygous nonsense Roquin-1 mutation. |
| Volume: |
10 |
| Issue: |
1 |
| Pages: |
4779 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Schlundt A |
| Year: |
2014 |
| Journal: |
Nat Struct Mol Biol |
| Title: |
Structural basis for RNA recognition in roquin-mediated post-transcriptional gene regulation. |
| Volume: |
21 |
| Issue: |
8 |
| Pages: |
671-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Srivastava M |
| Year: |
2015 |
| Journal: |
Nat Commun |
| Title: |
Roquin binds microRNA-146a and Argonaute2 to regulate microRNA homeostasis. |
| Volume: |
6 |
|
| Pages: |
6253 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Drees C |
| Year: |
2017 |
| Journal: |
J Immunol |
| Title: |
Roquin Paralogs Differentially Regulate Functional NKT Cell Subsets. |
| Volume: |
198 |
| Issue: |
7 |
| Pages: |
2747-2759 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Essig K |
| Year: |
2018 |
| Journal: |
Nat Commun |
| Title: |
Roquin targets mRNAs in a 3'-UTR-specific manner by different modes of regulation. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
3810 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Janowski R |
| Year: |
2016 |
| Journal: |
Nat Commun |
| Title: |
Roquin recognizes a non-canonical hexaloop structure in the 3'-UTR of Ox40. |
| Volume: |
7 |
|
| Pages: |
11032 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Schmidt H |
| Year: |
2023 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Unrestrained cleavage of Roquin-1 by MALT1 induces spontaneous T cell activation and the development of autoimmunity. |
| Volume: |
120 |
| Issue: |
48 |
| Pages: |
e2309205120 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jeltsch KM |
| Year: |
2014 |
| Journal: |
Nat Immunol |
| Title: |
Cleavage of roquin and regnase-1 by the paracaspase MALT1 releases their cooperatively repressed targets to promote T(H)17 differentiation. |
| Volume: |
15 |
| Issue: |
11 |
| Pages: |
1079-89 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Essig K |
| Year: |
2017 |
| Journal: |
Immunity |
| Title: |
Roquin Suppresses the PI3K-mTOR Signaling Pathway to Inhibit T Helper Cell Differentiation and Conversion of Treg to Tfr Cells. |
| Volume: |
47 |
| Issue: |
6 |
| Pages: |
1067-1082.e12 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Behrens G |
| Year: |
2021 |
| Journal: |
Nat Immunol |
| Title: |
Disrupting Roquin-1 interaction with Regnase-1 induces autoimmunity and enhances antitumor responses. |
| Volume: |
22 |
| Issue: |
12 |
| Pages: |
1563-1576 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hoefig KP |
| Year: |
2021 |
| Journal: |
Nat Commun |
| Title: |
Defining the RBPome of primary T helper cells to elucidate higher-order Roquin-mediated mRNA regulation. |
| Volume: |
12 |
| Issue: |
1 |
| Pages: |
5208 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rehage N |
| Year: |
2018 |
| Journal: |
Nat Commun |
| Title: |
Binding of NUFIP2 to Roquin promotes recognition and regulation of ICOS mRNA. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
299 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhou J |
| Year: |
2017 |
| Journal: |
Biochim Biophys Acta |
| Title: |
Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system. |
| Volume: |
1860 |
| Issue: |
12 |
| Pages: |
1159-1168 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information Editorial Staff Collaboration |
| Year: |
2001 |
|
| Title: |
LocusLink Collaboration |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
| Journal: |
Database Download |
| Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
31 |
| Issue: |
1 |
| Pages: |
278-81 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bedogni F |
| Year: |
2021 |
| Journal: |
Front Mol Neurosci |
| Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
| Volume: |
14 |
|
| Pages: |
686034 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wellcome Trust Sanger Institute |
| Year: |
2009 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
|
|
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•
•
•
•
•
|
| Publication |
| First Author: |
Shanghai Model Organisms Center |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
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•
•
•
•
|
| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
1670-9 |
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•
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| First Author: |
UniProt-GOA |
| Year: |
2012 |
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| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
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•
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
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| Title: |
MGI Sequence Curation Reference |
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Kawai J |
| Year: |
2001 |
| Journal: |
Nature |
| Title: |
Functional annotation of a full-length mouse cDNA collection. |
| Volume: |
409 |
| Issue: |
6821 |
| Pages: |
685-90 |
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Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
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MGD Nomenclature Committee |
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| Title: |
Nomenclature Committee Use |
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Zambrowicz BP |
| Year: |
2003 |
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Proc Natl Acad Sci U S A |
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Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
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Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
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Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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