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Search results 1 to 93 out of 93 for Rnf40

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Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Gene
9810 | RNF40
Type: gene
Organism: human
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Gene
454054 | RNF40
Type: gene
Organism: chimpanzee
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Gene
539901 | RNF40
Type: gene
Organism: cattle
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Gene
798088 | rnf40
Type: gene
Organism: zebrafish
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Gene
713148 | RNF40
Type: gene
Organism: macaque, rhesus
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Gene
100380175 | rnf40
Type: gene
Organism: frog, western clawed
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Gene
266712 | Rnf40
Type: gene
Organism: rat
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Gene
489913 | RNF40
Type: gene
Organism: dog, domestic
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Protein Coding Gene
MGI:2142048 | Rnf40
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
28209164 | J:311964
First Author: Xie W
Year: 2017
Journal: Genome Biol
Title: RNF40 regulates gene expression in an epigenetic context-dependent manner.
Volume: 18
Issue: 1
Pages: 32
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Publication
34088983 | J:314953
First Author: Kosinsky RL
Year: 2021
Journal: Cell Death Differ
Title: RNF20 and RNF40 regulate vitamin D receptor-dependent signaling in inflammatory bowel disease.
Volume: 28
Issue: 11
Pages: 3161-3175
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Publication
30321325 | J:311838
First Author: Kosinsky RL
Year: 2019
Journal: J Crohns Colitis
Title: Loss of RNF40 Decreases NF-κB Activity in Colorectal Cancer Cells and Reduces Colitis Burden in Mice.
Volume: 13
Issue: 3
Pages: 362-373
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Publication
32672815 | J:298372
First Author: Wüst HM
Year: 2020
Journal: Nucleic Acids Res
Title: Egr2-guided histone H2B monoubiquitination is required for peripheral nervous system myelination.
Volume: 48
Issue: 16
Pages: 8959-8976
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Publication
31186351 | J:281142
First Author: Wade AK
Year: 2019
Journal: J Biol Chem
Title: LIM-domain transcription complexes interact with ring-finger ubiquitin ligases and thereby impact islet β-cell function.
Volume: 294
Issue: 31
Pages: 11728-11740
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Protein Coding Gene
MGP_CAROLIEiJ_G0030512 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0033046 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0033029 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0032961 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0033030 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0032744 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_2142048 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0033539 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0032073 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0032717 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0032869 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0032822 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0032963 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0032854 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0033559 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0031780 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0032185 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0013719 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0031626 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2769723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2845723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1795023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2004-12-03
Strength: Ambiguous
Sex: Not Specified
Emaps: EMAPS:1647017
Pattern: Not Specified
Stage: TS17
Assay Id: MGI:3509308
Age: embryonic day 10.5
Image: 1
Note: Authors stated that in some instances they could not determine expression levels with certainty.
Specimen Label: 1
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2854023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2762123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1832123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2851823
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:6382093
Assay Type: Immunohistochemistry
Annotation Date: 2019-12-19
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3292723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:6382184
Age: embryonic day 15.5
Image: 1E
Specimen Label: 1E
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:6382093
Assay Type: Immunohistochemistry
Annotation Date: 2019-12-19
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3292727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:6382184
Age: postnatal day 1
Image: 1F
Specimen Label: 1F
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:6382093
Assay Type: Immunohistochemistry
Annotation Date: 2019-12-19
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3292728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6382184
Age: postnatal month 3
Image: 1G
Specimen Label: 1G
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:6382093
Assay Type: Immunohistochemistry
Annotation Date: 2019-12-19
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3292723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:6382184
Age: embryonic day 15.5
Image: S1A
Specimen Label: S1A
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
 
Probe: MGI:6382093
Assay Type: Immunohistochemistry
Annotation Date: 2019-12-19
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3292727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:6382184
Age: postnatal day 1
Image: S1B
Specimen Label: S1B
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2760523
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2852723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2874723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2850023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3506628
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1796223
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5539612
Age: embryonic day 15.5
Image: GUDMAP:5966
Specimen Label: GUDMAP:5966
Detected: true
Specimen Num: 1
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Publication
34007022 | J:307140
First Author: Prokakis E
Year: 2021
Journal: Oncogene
Title: USP22 promotes HER2-driven mammary carcinoma aggressiveness by suppressing the unfolded protein response.
Volume: 40
Issue: 23
Pages: 4004-4018
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Publication
19575011 | J:217992
First Author: Pirngruber J
Year: 2009
Journal: EMBO Rep
Title: CDK9 directs H2B monoubiquitination and controls replication-dependent histone mRNA 3'-end processing.
Volume: 10
Issue: 8
Pages: 894-900
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Publication
34290256 | J:322816
First Author: VanDusen NJ
Year: 2021
Journal: Nat Commun
Title: Massively parallel in vivo CRISPR screening identifies RNF20/40 as epigenetic regulators of cardiomyocyte maturation.
Volume: 12
Issue: 1
Pages: 4442
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Publication
22252316 | J:183708
First Author: Vethantham V
Year: 2012
Journal: Mol Cell Biol
Title: Dynamic loss of H2B ubiquitylation without corresponding changes in H3K4 trimethylation during myogenic differentiation.
Volume: 32
Issue: 6
Pages: 1044-55
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Publication
14621295 | J:86686
First Author: Okazaki N
Year: 2003
Journal: DNA Res
Title: Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Volume: 10
Issue: 4
Pages: 167-80
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Publication
- | J:342601
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniPathway vocabulary mapping
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Publication
- | J:77000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: MGC Data curation in Mouse Genome Informatics
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Publication
- | J:188991
     
First Author: The Jackson Laboratory
Year: 2012
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by The Jackson Laboratory
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Publication
- | J:81858
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: Data Curation Using Mouse Genome Assembly
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Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
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Publication
- | J:80155
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:155856
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Rat to Mouse ISO GO annotation transfer
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
33070155 | J:313895
First Author: Wegwitz F
Year: 2020
Journal: Cell Death Dis
Title: The histone H2B ubiquitin ligase RNF40 is required for HER2-driven mammary tumorigenesis.
Volume: 11
Issue: 10
Pages: 873
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Publication
31235600 | J:278197
First Author: Robson A
Year: 2019
Journal: Proc Natl Acad Sci U S A
Title: Histone H2B monoubiquitination regulates heart development via epigenetic control of cilia motility.
Volume: 116
Issue: 28
Pages: 14049-14054
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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