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Search results 1 to 73 out of 73 for Rpp38

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Hits by Strain

Type Details Score
Gene
10557 | RPP38
Type: gene
Organism: human
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Gene
100379676 | rpp38
Type: gene
Organism: frog, western clawed
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Gene
107976927 | RPP38
Type: gene
Organism: chimpanzee
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Gene
291317 | Rpp38
Type: gene
Organism: rat
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Gene
511723 | RPP38
Type: gene
Organism: cattle
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Gene
100683678 | RPP38
Type: gene
Organism: dog, domestic
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Gene
420530 | RPP38
Type: gene
Organism: chicken
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Gene
436798 | rpp38
Type: gene
Organism: zebrafish
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Gene
100429345 | RPP38
Type: gene
Organism: macaque, rhesus
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Protein Domain
IPR042848 | Rpp38
Type: Family
Description: Ribonuclease P (Rnp) is a ubiquitous ribozyme that catalyzes a Mg2 -dependent hydrolysis to remove the 5'-leader sequence of precursor tRNA (pre-tRNA) in all three domains of life []. In bacteria, the catalytic RNA (typically ~120kDa) is aided by a small protein cofactor (~14kDa) []. Archaeal and eukaryote RNase P consist of a single RNA and archaeal RNase P has four or five proteins, while eukaryotic RNase P consists of 9 or 10 proteins. Eukaryotic and archaeal RNase P RNAs cooperatively function with protein subunits in catalysis [].Eukaryotic nuclear RNase P shares most of its protein components with another essential RNP enzyme, nucleolar RNase MRP []. RNase MRP (mitochondrial RNA processing) is an rRNA processing enzyme that cleaves various RNAs, including ribosomal, messenger, and mitochondrial RNAs. It can cleave a specific site within precursor rRNA to generate the mature 5'-end of 5.8S rRNA []. Despite its name, the vast majority of RNase MRP is localized in the nucleolus []. RNase MRP has been shown to cleave primers for mitochondrial DNA replication and CLB2 mRNA. In yeast, RNase MRP possesses one putatively catalytic RNA and at least 9 protein subunits (Pop1, Pop3-Pop8, Rpp1, Snm1 and Rmp1) []. Human RNase MRP complex consists of 267 nucleotides and supports the interaction with and among at least seven protein components: hPop1, hPop5, Rpp20, Rpp25, Rpp30, Rpp38, and Rpp40) and three additional proteins, hPop4, Rpp21 and Rpp14, have been reported to be associated with at least a subset of RNase MRP complexes [].This entry includes animal Rpp38, which is a component of the Rnp and the MRP ribonuclease complexes [].
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Protein Coding Gene
MGI:2443607 | Rpp38
Type: protein_coding_gene
Organism: mouse, laboratory
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Gene
221060 | RPP38-DT
Type: gene
Organism: human
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Publication
28115465 | -
First Author: Goldfarb KC
Year: 2017
Journal: Genes Dev
Title: Targeted CRISPR disruption reveals a role for RNase MRP RNA in human preribosomal RNA processing.
Volume: 31
Issue: 1
Pages: 59-71
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Protein
Q80UU2
Organism: Mus musculus/domesticus
Length: 280  
Fragment?: false
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Protein
A2AJG0
Organism: Mus musculus/domesticus
Length: 280  
Fragment?: false
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Protein
Q8BX36
Organism: Mus musculus/domesticus
Length: 266  
Fragment?: true
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Publication
21956908 | -
First Author: Mattijssen S
Year: 2010
Journal: Wiley Interdiscip Rev RNA
Title: RNase MRP and disease.
Volume: 1
Issue: 1
Pages: 102-16
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Publication
15916546 | -
First Author: Walker SC
Year: 2005
Journal: Biochem Soc Trans
Title: Probing the structure of Saccharomyces cerevisiae RNase MRP.
Volume: 33
Issue: Pt 3
Pages: 479-81
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Publication
21665995 | -
First Author: Marvin MC
Year: 2011
Journal: RNA
Title: Accumulation of noncoding RNA due to an RNase P defect in Saccharomyces cerevisiae.
Volume: 17
Issue: 8
Pages: 1441-50
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Publication
20627997 | -
First Author: Esakova O
Year: 2010
Journal: RNA
Title: Of proteins and RNA: the RNase P/MRP family.
Volume: 16
Issue: 9
Pages: 1725-47
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Publication
7731988 | -
First Author: Bussey H
Year: 1995
Journal: Proc Natl Acad Sci U S A
Title: The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.
Volume: 92
Issue: 9
Pages: 3809-13
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Publication
10024167 | -
First Author: Jarrous N
Year: 1999
Journal: RNA
Title: Rpp14 and Rpp29, two protein subunits of human ribonuclease P.
Volume: 5
Issue: 2
Pages: 153-7
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Publication
28971852 | -
First Author: Gopalan V
Year: 2018
Journal: RNA
Title: Chance and necessity in the evolution of RNase P.
Volume: 24
Issue: 1
Pages: 1-5
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Protein Coding Gene
MGP_CAROLIEiJ_G0023133 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0025304 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0025280 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0025249 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0025276 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0025036 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_2443607 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0025719 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0024500 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0025016 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0025147 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0025109 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0025234 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0025142 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0025777 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0024249 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0024570 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0019193 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0024051 | -
Type: protein_coding_gene
Organism: Mus spretus
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Gene
703278 | RPP38-DT
Type: gene
Organism: macaque, rhesus
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Publication
12045094 | J:88304
 
First Author: Xiao S
Year: 2002
Journal: Annu Rev Biochem
Title: Eukaryotic ribonuclease P: a plurality of ribonucleoprotein enzymes.
Volume: 71
Pages: 165-89
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Publication
- | J:72245
       
First Author: GOA curators, MGI curators
Year: 2001
Title: Gene Ontology annotation based on Enzyme Commission mapping
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Publication
- | J:84900
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Journal: Database Download
Title: Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database
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Publication
- | J:148605
     
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
15613537 | -
First Author: Dlakić M
Year: 2005
Journal: RNA
Title: 3D models of yeast RNase P/MRP proteins Rpp1p and Pop3p.
Volume: 11
Issue: 2
Pages: 123-7
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Protein Domain
IPR013241 | RNase_P_Pop3
Type: Family
Description: This family of fungal proteins form a subunit of RNase P, the ribonucleoprotein enzyme that cleaves the leader sequence of precursor tRNAs to generate mature tRNAs. The structure of Pop3 has been assigned the L7Ae/L30e fold []. This RNA-binding fold is also present in human RNase P subunit Rpp38, raising the possibility that Pop3p and Rpp38 are functional homologues.
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Publication
9630247 | J:62783
First Author: Jarrous N
Year: 1998
Journal: RNA
Title: Autoantigenic properties of some protein subunits of catalytically active complexes of human ribonuclease P.
Volume: 4
Issue: 4
Pages: 407-17
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