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Search results 1 to 100 out of 116 for Rtcb

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Hits by Strain

Hits by Category

Type Details Score
Gene
51493 | RTCB
Type: gene
Organism: human
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Gene
458782 | RTCB
Type: gene
Organism: chimpanzee
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Gene
525106 | RTCB
Type: gene
Organism: cattle
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Gene
418064 | RTCB
Type: gene
Organism: chicken
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Gene
406376 | rtcb
Type: gene
Organism: zebrafish
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Gene
717258 | RTCB
Type: gene
Organism: macaque, rhesus
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Gene
595066 | rtcb
Type: gene
Organism: frog, western clawed
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Gene
362855 | Rtcb
Type: gene
Organism: rat
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Gene
474524 | RTCB
Type: gene
Organism: dog, domestic
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Protein Domain
IPR001233 | RtcB
Type: Family
Description: RctB is a RNA ligase that mediates the joining of broken tRNA-like stem-loop structures in case of tRNA damage. It probably participates to tRNA restriction-repair by ligating broken tRNA-like stem-loop structures with 2',3'-cyclic phosphate and 5'-OH ends to form a splice junction with a 2'-OH, 3',5'-phosphodiester [, , , ]. In worms, this protein has as a neuroprotective role in the age-dependent degeneration of dopamine neurons [].
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Protein Coding Gene
MGI:106379 | Rtcb
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein
Q3TJ01
Organism: Mus musculus/domesticus
Length: 505  
Fragment?: false
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Protein
Q99LF4
Organism: Mus musculus/domesticus
Length: 505  
Fragment?: false
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Publication
25366321 | -
First Author: Kosmaczewski SG
Year: 2014
Journal: EMBO Rep
Title: The RtcB RNA ligase is an essential component of the metazoan unfolded protein response.
Volume: 15
Issue: 12
Pages: 1278-85
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Publication
22949672 | -
First Author: Englert M
Year: 2012
Journal: Proc Natl Acad Sci U S A
Title: Structural and mechanistic insights into guanylylation of RNA-splicing ligase RtcB joining RNA between 3'-terminal phosphate and 5'-OH.
Volume: 109
Issue: 38
Pages: 15235-40
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Publication
21224389 | -
First Author: Tanaka N
Year: 2011
Journal: J Biol Chem
Title: RtcB is the RNA ligase component of an Escherichia coli RNA repair operon.
Volume: 286
Issue: 10
Pages: 7727-31
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Publication
34591784 | J:315115
First Author: Li R
Year: 2021
Journal: Reproduction
Title: YY1 and RTCB in mouse uterine decidualization and embryo implantation.
Volume: 162
Issue: 6
Pages: 461-472
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Publication
22320833 | -
First Author: Desai KK
Year: 2012
Journal: Biochemistry
Title: tRNA ligase catalyzes the GTP-dependent ligation of RNA with 3'-phosphate and 5'-hydroxyl termini.
Volume: 51
Issue: 7
Pages: 1333-5
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Publication
25429148 | -
First Author: Ray A
Year: 2014
Journal: J Neurosci
Title: RTCB-1 mediates neuroprotection via XBP-1 mRNA splicing in the unfolded protein response pathway.
Volume: 34
Issue: 48
Pages: 16076-85
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Publication
20510672 | J:162420
First Author: Wang Y
Year: 2010
Journal: Biochem Biophys Res Commun
Title: HSPC117 deficiency in cloned embryos causes placental abnormality and fetal death.
Volume: 397
Issue: 3
Pages: 407-12
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Gene
100684959 | LOC100684959
Type: gene
Organism: dog, domestic
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Publication
25378478 | J:216740
First Author: Jurkin J
Year: 2014
Journal: EMBO J
Title: The mammalian tRNA ligase complex mediates splicing of XBP1 mRNA and controls antibody secretion in plasma cells.
Volume: 33
Issue: 24
Pages: 2922-36
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Publication
25087875 | J:215758
First Author: Lu Y
Year: 2014
Journal: Mol Cell
Title: A synthetic biology approach identifies the mammalian UPR RNA ligase RtcB.
Volume: 55
Issue: 5
Pages: 758-70
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Protein Coding Gene
MGP_CAROLIEiJ_G0015689 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0017605 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0017585 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0017545 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0017548 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0017371 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_106379 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0018005 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0016937 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0017340 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0017447 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0017440 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0017519 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0017468 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0018042 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0016718 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0016995 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0031396 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0016507 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
     
Probe: MGI:1332023
Assay Type: RT-PCR
Annotation Date: 1999-03-18
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:1332024
Age: embryonic day 7.5
Specimen Label: 1x
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:1332023
Assay Type: RT-PCR
Annotation Date: 1999-03-18
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:1332024
Age: embryonic day 7.5
Specimen Label: 10x
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:1332023
Assay Type: RT-PCR
Annotation Date: 1999-03-18
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:1332024
Age: embryonic day 7.5
Specimen Label: 100x
Detected: false
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:1332023
Assay Type: RT-PCR
Annotation Date: 1999-03-18
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1604211
Stage: TS11
Assay Id: MGI:1332024
Age: embryonic day 7.5
Specimen Label: 1x
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
     
Probe: MGI:1332023
Assay Type: RT-PCR
Annotation Date: 1999-03-18
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1604211
Stage: TS11
Assay Id: MGI:1332024
Age: embryonic day 7.5
Specimen Label: 10x
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
     
Probe: MGI:1332023
Assay Type: RT-PCR
Annotation Date: 1999-03-18
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1604211
Stage: TS11
Assay Id: MGI:1332024
Age: embryonic day 7.5
Specimen Label: 100x
Detected: true
Specimen Num: 6
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:5817214
Age: embryonic day 3.5
Specimen Label: IVP
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
       
Probe: MGI:5817210
Assay Type: Western blot
Annotation Date: 2017-01-11
Strength: Not Specified
Sex: Not Specified
Emaps: EMAPS:3568928
Stage: TS28
Assay Id: MGI:5817217
Age: postnatal
Specimen Label: None
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160508
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160658
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160508
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160658
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160508
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160658
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 6
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160508
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160658
Stage: TS08
Assay Id: MGI:5817221
Age: embryonic day 6.5
Specimen Label: None
Detected: true
Specimen Num: 8
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603920
Stage: TS20
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568928
Stage: TS28
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603920
Stage: TS20
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568928
Stage: TS28
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603920
Stage: TS20
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568928
Stage: TS28
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 6
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603920
Stage: TS20
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568928
Stage: TS28
Assay Id: MGI:5817222
Age: embryonic day 12.0
Specimen Label: None
Detected: true
Specimen Num: 8
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GXD Expression
GXD Expression
     
Probe: MGI:5817211
Assay Type: RT-PCR
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568928
Stage: TS28
Assay Id: MGI:5817224
Age: embryonic day 19.0
Specimen Label: None
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5817210
Assay Type: Immunohistochemistry
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160414
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:5817220
Age: embryonic day 3.5
Note: Expression was detected in the cytoplasm of blastomeres in both the inner cell mass and trophectoderm of blastocysts.
Specimen Label: 2B B1-3
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5817210
Assay Type: Immunohistochemistry
Annotation Date: 2017-01-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160464
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:5817220
Age: embryonic day 3.5
Note: Expression was detected in the cytoplasm of blastomeres in both the inner cell mass and trophectoderm of blastocysts.
Specimen Label: 2B B1-3
Detected: true
Specimen Num: 1
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Publication
36178098 | J:330334
 
First Author: Zhang H
Year: 2022
Journal: Development
Title: The RNA ligase RNA terminal phosphate cyclase B regulates mRNA alternative splicing and is required for mouse oocyte development and maintenance.
Volume: 149
Issue: 19
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Publication
25917546 | J:224688
First Author: Zhang T
Year: 2015
Journal: Stem Cells
Title: Loss of Faap20 Causes Hematopoietic Stem and Progenitor Cell Depletion in Mice Under Genotoxic Stress.
Volume: 33
Issue: 7
Pages: 2320-30
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Publication
9811942 | J:50869
First Author: Ko MS
Year: 1998
Journal: Hum Mol Genet
Title: Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome.
Volume: 7
Issue: 12
Pages: 1967-78
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Publication
- | J:29126
     
First Author: The Jackson Laboratory DNA Panel Mapping Resource
Year: 1999
Journal: Database Release
Title: JAX Interspecific Backcross BSS and BSB Public Mapping Data
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
10725249 | J:60984
First Author: Ko MS
Year: 2000
Journal: Development
Title: Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.
Volume: 127
Issue: 8
Pages: 1737-49
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
- | J:148605
     
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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•
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•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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•
•
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•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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•
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•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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UniProt Feature
UniProt Feature
Begin: 1
Description: RNA-splicing ligase RtcB homolog
Type: chain
End: 505
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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