Type |
Details |
Score |
Gene |
|
•
•
•
•
•
|
Interaction Term |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Bacterial high affinity transport systems are involved in active transport of solutes across the cytoplasmic membrane. Most of the bacterial ABC (ATP-binding cassette) importers are composed of one or two transmembrane permease proteins, one or two nucleotide-binding proteins and a highly specific periplasmic solute-binding protein. In Gram-negative bacteria the solute-binding proteins are dissolved in the periplasm, while in archaea and Gram-positive bacteria, their solute-binding proteins are membrane-anchored lipoproteins [, ]. On the basis of sequence similarities, the vast majority of these solute-binding proteins can be grouped into eight family clusters [], which generally correlate with the nature of the solute bound. This entry represents the family 1. Family 1 members include:Maltose/maltodextrin-binding proteins of Enterobacteriaceae (gene malE) []and Streptococcus pneumoniae malXMultiple oligosaccharide binding protein of Streptococcus mutans (gene msmE)Escherichia coli glycerol-3-phosphate-binding proteinSerratia marcescens iron-binding protein (gene sfuA) and the homologous proteins (gene fbp) from Haemophilus influenzae and NeisseriaE. coli thiamine-binding protein (gene tbpA) Interestingly, these thiamin-binding proteins share protein structural similarity with thiaminase-I. They may be evolved from a common ancestor []. This entry also includes thiaminase-1 from Paenibacillus thiaminolyticus (Bacillus thiaminolyticus). |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Tam R |
Year: |
1993 |
Journal: |
Microbiol Rev |
Title: |
Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria. |
Volume: |
57 |
Issue: |
2 |
Pages: |
320-46 |
|
•
•
•
•
•
|
Publication |
First Author: |
Singh B |
Year: |
2008 |
Journal: |
Microbiology |
Title: |
Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system. |
Volume: |
154 |
Issue: |
Pt 3 |
Pages: |
797-809 |
|
•
•
•
•
•
|
Publication |
First Author: |
Saurin W |
Year: |
1994 |
Journal: |
Protein Sci |
Title: |
Sequence relationships between integral inner membrane proteins of binding protein-dependent transport systems: evolution by recurrent gene duplications. |
Volume: |
3 |
Issue: |
2 |
Pages: |
325-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Soriano EV |
Year: |
2008 |
Journal: |
Biochemistry |
Title: |
Structural similarities between thiamin-binding protein and thiaminase-I suggest a common ancestor. |
Volume: |
47 |
Issue: |
5 |
Pages: |
1346-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sharff AJ |
Year: |
1995 |
Journal: |
J Mol Biol |
Title: |
Refined structures of two insertion/deletion mutants probe function of the maltodextrin binding protein. |
Volume: |
246 |
Issue: |
1 |
Pages: |
8-13 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
197
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
217
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
217
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
217
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
232
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
217
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
147
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
232
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
217
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Mills JS |
Year: |
1987 |
Journal: |
Nucleic Acids Res |
Title: |
Androgen regulated expression of a spermine binding protein gene in mouse ventral prostate. |
Volume: |
15 |
Issue: |
19 |
Pages: |
7709-24 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
SBP (for SQUAMOSA-pROMOTER BINDING PROTEIN) domain is a sequence specific DNA-binding domain found in plant proteins []. Members of family probably function as transcription factors involved in the control of early flower development []. They share a highly conserved DNA-binding domain that contains two zinc-binding sites. Among the 11 possible ligands for the zinc atoms that are conserved in the SBP zinc finger, only 8 are used. The SBP zinc finger follows the general pattern C-x4-C-x16-C-x2-[HC]-x15-C-x2-C-x3-H-x11-C. Three other histidines are well conserved but not involved in zinc binding [, ].In vitro experiments show that the SBP zinc finger preferentially binds theconsensus sequence -TNCGTACAA- []. However, little is known of the physiological functions of these putative transcriptional regulators beyond their ability to bind DNA.The solution structure of the SBP zinc finger has been solved[]. The first four Cys or His coordinate one zinc ion and the last four coordinate the other. It can be viewed as two structural subdomains, each subdomain containing a single zinc-binding pocket. The N-terminal subdomain consists of two short alpha helices whereas the C-terminal one contains a three-stranded antiparallel β-sheet. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
Publication |
First Author: |
Abbott DE |
Year: |
2003 |
Journal: |
Genome Biol |
Title: |
Expressed sequence tag profiling identifies developmental and anatomic partitioning of gene expression in the mouse prostate. |
Volume: |
4 |
Issue: |
12 |
Pages: |
R79 |
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fischer A |
Year: |
2005 |
Journal: |
Neuron |
Title: |
Opposing roles of transient and prolonged expression of p25 in synaptic plasticity and hippocampus-dependent memory. |
Volume: |
48 |
Issue: |
5 |
Pages: |
825-38 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Joesting MS |
Year: |
2008 |
Journal: |
Dev Biol |
Title: |
Secreted frizzled related protein 1 is a paracrine modulator of epithelial branching morphogenesis, proliferation, and secretory gene expression in the prostate. |
Volume: |
317 |
Issue: |
1 |
Pages: |
161-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Function or Process or Component Unknown following Literature Review |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Timmermans S |
Year: |
2018 |
Journal: |
JCI Insight |
Title: |
Overview of inactivating mutations in the protein-coding genome of the mouse reference strain C57BL/6J. |
Volume: |
3 |
Issue: |
13 |
|
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3055856 |
Assay Type: |
RT-PCR |
Annotation Date: |
2004-11-02 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2983628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3055876 |
Age: |
postnatal adult |
Image: |
4 |
|
Specimen Label: |
VP |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3055856 |
Assay Type: |
RT-PCR |
Annotation Date: |
2004-11-02 |
Strength: |
Not Specified |
Sex: |
Male |
Emaps: |
EMAPS:2979428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3055876 |
Age: |
postnatal adult |
Image: |
4 |
|
Specimen Label: |
AP |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3055856 |
Assay Type: |
RT-PCR |
Annotation Date: |
2004-11-02 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:3571028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3055876 |
Age: |
postnatal adult |
Image: |
4 |
|
Specimen Label: |
DLP |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Not Specified |
Sex: |
Male |
Emaps: |
EMAPS:2979428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846415 |
Age: |
postnatal |
Image: |
6 |
|
Specimen Label: |
WT AP |
|
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Not Specified |
Sex: |
Male |
Emaps: |
EMAPS:2979428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846415 |
Age: |
postnatal |
Image: |
6 |
|
Specimen Label: |
KO AP |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2983628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846415 |
Age: |
postnatal |
Image: |
6 |
|
Specimen Label: |
WT VP |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2983628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846415 |
Age: |
postnatal |
Image: |
6 |
|
Specimen Label: |
KO VP |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Not Specified |
Sex: |
Male |
Emaps: |
EMAPS:3571028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846415 |
Age: |
postnatal |
Image: |
6 |
|
Specimen Label: |
WT DLP |
|
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Not Specified |
Sex: |
Male |
Emaps: |
EMAPS:3571028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846415 |
Age: |
postnatal |
Image: |
6 |
|
Specimen Label: |
KO DLP |
|
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Not Specified |
Sex: |
Male |
Emaps: |
EMAPS:2979428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846420 |
Age: |
postnatal year 1 |
Image: |
7 |
|
Specimen Label: |
WT AP |
|
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2983628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846420 |
Age: |
postnatal year 1 |
Image: |
7 |
|
Specimen Label: |
WT VP |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3846133 |
Assay Type: |
RT-PCR |
Annotation Date: |
2009-06-02 |
Strength: |
Not Specified |
Sex: |
Male |
Emaps: |
EMAPS:3571028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3846420 |
Age: |
postnatal year 1 |
Image: |
7 |
|
Specimen Label: |
WT DLP |
|
Specimen Num: |
5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Mouse Synonym Curation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
SBP (for SQUAMOSA-pROMOTER BINDING PROTEIN) domain is a sequence specific DNA-binding domain found in plant proteins []. Members of family probably function as transcription factors involved in the control of early flower development []. They share a highly conserved DNA-binding domain that contains two zinc-binding sites. Among the 11 possible ligands for the zinc atoms that are conserved in the SBP zinc finger, only 8 are used. The SBP zinc finger follows the general pattern C-x4-C-x16-C-x2-[HC]-x15-C-x2-C-x3-H-x11-C. Three other histidines are well conserved but not involved in zinc binding [, ].In vitro experiments show that the SBP zinc finger preferentially binds theconsensus sequence -TNCGTACAA- []. However, little is known of the physiological functions of these putative transcriptional regulators beyond their ability to bind DNA.The solution structure of the SBP zinc finger has been solved[]. The first four Cys or His coordinate one zinc ion and the last four coordinate the other. It can be viewed as two structural subdomains, each subdomain containing a single zinc-binding pocket. The N-terminal subdomain consists of two short alpha helices whereas the C-terminal one contains a three-stranded antiparallel β-sheet. |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamasaki K |
Year: |
2004 |
Journal: |
J Mol Biol |
Title: |
A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors. |
Volume: |
337 |
Issue: |
1 |
Pages: |
49-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cardon G |
Year: |
1999 |
Journal: |
Gene |
Title: |
Molecular characterisation of the Arabidopsis SBP-box genes. |
Volume: |
237 |
Issue: |
1 |
Pages: |
91-104 |
|
•
•
•
•
•
|
Publication |
First Author: |
Klein J |
Year: |
1996 |
Journal: |
Mol Gen Genet |
Title: |
A new family of DNA binding proteins includes putative transcriptional regulators of the Antirrhinum majus floral meristem identity gene SQUAMOSA. |
Volume: |
250 |
Issue: |
1 |
Pages: |
7-16 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
199
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
403
 |
Fragment?: |
false |
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•
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•
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DO Term |
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Gene |
Type: |
gene |
Organism: |
human |
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Protein Domain |
Type: |
Family |
Description: |
The tripartite ATP-independent periplasmic (TRAP) transporters are substrate-binding protein (SBP)-dependent secondary transporters ubiquitous in prokaryotes, but absent from eukaryotes. Theyare comprised of an SBP of the DctP or TAXI families and two integral membrane proteins of unequal sizes that form the DctQ and DctM protein families (the small and large membrane components respectively). The TRAP transporter for sialic acid consists of the SBP siaP, and siaQM (termed siaT in some cases), encoding the fused integral membrane protein [].This family consists of DctQ homologues found in TRAP transporters []. |
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Protein Domain |
Type: |
Family |
Description: |
This entry represents a group of DNA binding proteins, known as SBP (SQUAMOSA-PROMOTER BINDING PROTEIN) family. They are putative transcription factors characterised by a highly conserved SBP-box of 76 amino acids involved in DNA binding and nuclear localisation []. They are involved in the control of early flower development []. |
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Gene |
Type: |
gene |
Organism: |
human |
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•
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Publication |
First Author: |
Preston JC |
Year: |
2010 |
Journal: |
Plant J |
Title: |
SQUAMOSA-PROMOTER BINDING PROTEIN 1 initiates flowering in Antirrhinum majus through the activation of meristem identity genes. |
Volume: |
62 |
Issue: |
4 |
Pages: |
704-12 |
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•
•
•
•
•
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Publication |
First Author: |
Wu G |
Year: |
2006 |
Journal: |
Development |
Title: |
Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3. |
Volume: |
133 |
Issue: |
18 |
Pages: |
3539-47 |
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•
•
•
•
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Publication |
First Author: |
Jorgensen SA |
Year: |
2014 |
Journal: |
Mol Phylogenet Evol |
Title: |
Differential SPL gene expression patterns reveal candidate genes underlying flowering time and architectural differences in Mimulus and Arabidopsis. |
Volume: |
73 |
|
Pages: |
129-39 |
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•
•
•
•
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Protein Domain |
Type: |
Family |
Description: |
This entry represents a group of DNA binding proteins, known as SBP (SQUAMOSA-pROMOTER BINDING PROTEIN) family. They are putative transcription factors characterised by a highly conserved SBP-box of 76 amino acids involved in DNA binding and nuclear localisation []. They are involved in the control of early flower development []. This entry includes Arabidopsis SPL3 and SPL4 []. SPL3/SPL4 promote vegetative phase change and flowering, and are strongly repressed by miR156 []. |
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Protein Domain |
Type: |
Conserved_site |
Description: |
Sulphate-binding protein (gene sbp or sbpA) and thiosulphate-binding protein (gene cysP) are two structurally related periplasmic bacterial proteins which specifically bind sulphate and thiosulphate and are involved in the transport systems for these nutrients [, ]. There are two conserved regions in the protein, one located in the N-terminal region and the other in the central part of these proteins. The second region includes two adjacent amino acids (Ser-Gly) that, in sbp, are known to be essential for sulphate binding [].This entry represents a conserved site located in the N-terminal region of these proteins. |
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Protein Domain |
Type: |
Binding_site |
Description: |
Sulphate-binding protein (gene sbp or sbpA) and thiosulphate-binding protein (gene cysP) are two structurally related periplasmic bacterial proteins which specifically bind sulphate and thiosulphate and are involved in the transport systems for these nutrients [, ]. There are two conserved regions in the protein, one located in the N-terminal region and the other in the central part of these proteins. The second region includes two adjacent amino acids (Ser-Gly) that, in sbp, are knownto be essential for sulphate binding [].This entry represents the second conserved region that includes two adjacent amino acids (Ser-Gly) known to be essential for sulfate binding []. |
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Publication |
First Author: |
Hryniewicz M |
Year: |
1990 |
Journal: |
J Bacteriol |
Title: |
Sulfate and thiosulfate transport in Escherichia coli K-12: identification of a gene encoding a novel protein involved in thiosulfate binding. |
Volume: |
172 |
Issue: |
6 |
Pages: |
3358-66 |
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•
•
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Publication |
First Author: |
Pflugrath JW |
Year: |
1988 |
Journal: |
J Mol Biol |
Title: |
The 2 A resolution structure of the sulfate-binding protein involved in active transport in Salmonella typhimurium. |
Volume: |
200 |
Issue: |
1 |
Pages: |
163-80 |
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•
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Publication |
First Author: |
Laudenbach DE |
Year: |
1991 |
Journal: |
J Bacteriol |
Title: |
Characterization and mutagenesis of sulfur-regulated genes in a cyanobacterium: evidence for function in sulfate transport. |
Volume: |
173 |
Issue: |
9 |
Pages: |
2739-50 |
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•
•
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Publication |
First Author: |
Rabus R |
Year: |
1999 |
Journal: |
Microbiology |
Title: |
TRAP transporters: an ancient family of extracytoplasmic solute-receptor-dependent secondary active transporters. |
Volume: |
145 ( Pt 12) |
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Pages: |
3431-45 |
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•
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•
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Publication |
First Author: |
Teixeira SK |
Year: |
2024 |
Journal: |
Sci Adv |
Title: |
Genetic determinants of blood pressure and heart rate identified through ENU-induced mutagenesis with automated meiotic mapping. |
Volume: |
10 |
Issue: |
9 |
Pages: |
eadj9797 |
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HT Experiment |
Series Id: |
GSE19817 |
Experiment Type: |
transcription profiling by array |
Study Type: |
Baseline |
Source: |
ArrayExpress |
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•
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•
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Publication |
First Author: |
Mulligan C |
Year: |
2011 |
Journal: |
FEMS Microbiol Rev |
Title: |
Tripartite ATP-independent periplasmic (TRAP) transporters in bacteria and archaea. |
Volume: |
35 |
Issue: |
1 |
Pages: |
68-86 |
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•
•
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•
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Publication |
First Author: |
Fujiwara A |
Year: |
2014 |
Journal: |
J Hypertens |
Title: |
Impaired nitric oxide production and increased blood pressure in systemic heterozygous ATP2B1 null mice. |
Volume: |
32 |
Issue: |
7 |
Pages: |
1415-23; discussion 1423 |
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