| Type |
Details |
Score |
| Gene |
| Type: |
gene |
| Organism: |
human |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
frog, western clawed |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Blednov YA |
| Year: |
2019 |
| Journal: |
Genes Brain Behav |
| Title: |
Scn4b regulates the hypnotic effects of ethanol and other sedative drugs. |
| Volume: |
18 |
| Issue: |
6 |
| Pages: |
e12562 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6182857 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-25 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689419 |
|
| Stage: |
TS19 |
| Assay Id: |
MGI:6191258 |
| Age: |
embryonic day 11.5 |
|
|
| Specimen Label: |
Table S2 - E11.5 - Scn4b |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6182857 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-25 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689421 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:6191258 |
| Age: |
embryonic day 13.5 |
|
|
| Specimen Label: |
Table S2 - E13.5 - Scn4b |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6182857 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-25 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:1689424 |
|
| Stage: |
TS24 |
| Assay Id: |
MGI:6191258 |
| Age: |
embryonic day 15.5 |
|
|
| Specimen Label: |
Table S2 - E15.5 - Scn4b |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6182857 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-25 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1689426 |
| Pattern: |
Not Specified |
| Stage: |
TS26 |
| Assay Id: |
MGI:6191258 |
| Age: |
embryonic day 18.5 |
|
|
| Specimen Label: |
Table S2 - E18.5 - Scn4b |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6182857 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-25 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6191258 |
| Age: |
postnatal day 4 |
|
|
| Specimen Label: |
Table S2 - P4 - Scn4b |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6182857 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-25 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6191258 |
| Age: |
postnatal day 14 |
|
|
| Specimen Label: |
Table S2 - P14 - Scn4b |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6182857 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-25 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6191258 |
| Age: |
postnatal day 28 |
|
|
| Specimen Label: |
Table S2 - P28 - Scn4b |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
228
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Miyazaki H |
| Year: |
2014 |
| Journal: |
Nat Commun |
| Title: |
Singular localization of sodium channel β4 subunit in unmyelinated fibres and its role in the striatum. |
| Volume: |
5 |
|
| Pages: |
5525 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ransdell JL |
| Year: |
2017 |
| Journal: |
Cell Rep |
| Title: |
Loss of Navβ4-Mediated Regulation of Sodium Currents in Adult Purkinje Neurons Disrupts Firing and Impairs Motor Coordination and Balance. |
| Volume: |
19 |
| Issue: |
3 |
| Pages: |
532-544 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ji X |
| Year: |
2017 |
| Journal: |
Front Cell Neurosci |
| Title: |
The Sodium Channel β4 Auxiliary Subunit Selectively Controls Long-Term Depression in Core Nucleus Accumbens Medium Spiny Neurons. |
| Volume: |
11 |
|
| Pages: |
17 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus caroli |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bant JS |
| Year: |
2010 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Control of transient, resurgent, and persistent current by open-channel block by Na channel beta4 in cultured cerebellar granule neurons. |
| Volume: |
107 |
| Issue: |
27 |
| Pages: |
12357-62 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7507102 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-07-14 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3657628 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7507129 |
| Age: |
postnatal month 4 |
|
|
| Specimen Label: |
WT |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7507102 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-07-14 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3657628 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7507129 |
| Age: |
postnatal month 4 |
|
|
| Specimen Label: |
RARb-/- |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7507102 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-07-14 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3657528 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7507145 |
| Age: |
postnatal month 4 |
|
|
| Specimen Label: |
WT |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7507102 |
| Assay Type: |
RT-PCR |
| Annotation Date: |
2023-07-14 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3657528 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:7507145 |
| Age: |
postnatal month 4 |
|
|
| Specimen Label: |
RARb-/- |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
White HV |
| Year: |
2019 |
| Journal: |
J Gen Physiol |
| Title: |
Effects of FGF14 and NaVβ4 deletion on transient and resurgent Na current in cerebellar Purkinje neurons. |
| Volume: |
151 |
| Issue: |
11 |
| Pages: |
1300-1318 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Aman TK |
| Year: |
2009 |
| Journal: |
J Neurosci |
| Title: |
Regulation of persistent Na current by interactions between beta subunits of voltage-gated Na channels. |
| Volume: |
29 |
| Issue: |
7 |
| Pages: |
2027-42 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Grieco TM |
| Year: |
2005 |
| Journal: |
Neuron |
| Title: |
Open-channel block by the cytoplasmic tail of sodium channel beta4 as a mechanism for resurgent sodium current. |
| Volume: |
45 |
| Issue: |
2 |
| Pages: |
233-44 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tabakoff B |
| Year: |
2008 |
| Journal: |
Mamm Genome |
| Title: |
The genomic determinants of alcohol preference in mice. |
| Volume: |
19 |
| Issue: |
5 |
| Pages: |
352-65 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Delgado C |
| Year: |
2021 |
| Journal: |
Development |
| Title: |
Neural cell adhesion molecule is required for ventricular conduction system development. |
| Volume: |
148 |
| Issue: |
11 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ogiwara I |
| Year: |
2018 |
| Journal: |
Commun Biol |
| Title: |
Nav1.2 haplodeficiency in excitatory neurons causes absence-like seizures in mice. |
| Volume: |
1 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Martinez ME |
| Year: |
2022 |
| Journal: |
JCI Insight |
| Title: |
DIO3 protects against thyrotoxicosis-derived cranio-encephalic and cardiac congenital abnormalities. |
| Volume: |
7 |
| Issue: |
21 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lopez-Santiago LF |
| Year: |
2007 |
| Journal: |
J Mol Cell Cardiol |
| Title: |
Sodium channel Scn1b null mice exhibit prolonged QT and RR intervals. |
| Volume: |
43 |
| Issue: |
5 |
| Pages: |
636-47 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mulligan MK |
| Year: |
2006 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Toward understanding the genetics of alcohol drinking through transcriptome meta-analysis. |
| Volume: |
103 |
| Issue: |
16 |
| Pages: |
6368-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Niewiadomska-Cimicka A |
| Year: |
2017 |
| Journal: |
Mol Neurobiol |
| Title: |
Genome-wide Analysis of RARβ Transcriptional Targets in Mouse Striatum Links Retinoic Acid Signaling with Huntington's Disease and Other Neurodegenerative Disorders. |
| Volume: |
54 |
| Issue: |
5 |
| Pages: |
3859-3878 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Patel T |
| Year: |
2022 |
| Journal: |
Nat Commun |
| Title: |
Transcriptional dynamics of murine motor neuron maturation in vivo and in vitro. |
| Volume: |
13 |
| Issue: |
1 |
| Pages: |
5427 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang N |
| Year: |
2022 |
| Journal: |
Neuron |
| Title: |
Mapping brain gene coexpression in daytime transcriptomes unveils diurnal molecular networks and deciphers perturbation gene signatures. |
| Volume: |
110 |
| Issue: |
20 |
| Pages: |
3318-3338.e9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Menendez-Montes I |
| Year: |
2016 |
| Journal: |
Dev Cell |
| Title: |
Myocardial VHL-HIF Signaling Controls an Embryonic Metabolic Switch Essential for Cardiac Maturation. |
| Volume: |
39 |
| Issue: |
6 |
| Pages: |
724-739 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
MGC Data curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI and IMPC |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
| Journal: |
Database Download |
| Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Thompson CL |
| Year: |
2014 |
| Journal: |
Neuron |
| Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
| Volume: |
83 |
| Issue: |
2 |
| Pages: |
309-323 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
|
| Title: |
MGI Sequence Curation Reference |
|
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|
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•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
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| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
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| Title: |
Cyagen Biosciences Website. |
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•
•
•
•
•
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| Publication |
| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
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| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
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•
•
•
•
•
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| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
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•
•
•
•
•
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| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
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•
•
•
•
•
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| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
|
•
•
•
•
•
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
|
| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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| Publication |
| First Author: |
Bon E |
| Year: |
2016 |
| Journal: |
Nat Commun |
| Title: |
SCN4B acts as a metastasis-suppressor gene preventing hyperactivation of cell migration in breast cancer. |
| Volume: |
7 |
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| Pages: |
13648 |
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| Allele |
| Name: |
sodium channel, type IV, beta; targeted mutation 1.2, Gregg E Homanics |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout |
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| Allele |
| Name: |
transgene insertion 1, Nobuyuki Nukina |
| Allele Type: |
Transgenic |
| Attribute String: |
Reporter |
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| Strain |
| Attribute String: |
mutant stock, transgenic |
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| Strain |
| Attribute String: |
congenic, mutant strain, transgenic |
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| DO Term |
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| Publication |
| First Author: |
Miyazaki H |
| Year: |
2020 |
| Journal: |
J Biol Chem |
| Title: |
FACS-array-based cell purification yields a specific transcriptome of striatal medium spiny neurons in a murine Huntington disease model. |
| Volume: |
295 |
| Issue: |
29 |
| Pages: |
9768-9785 |
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| Publication |
| First Author: |
Oginsky MF |
| Year: |
2017 |
| Journal: |
J Cell Physiol |
| Title: |
Hyperexcitability of Mesencephalic Trigeminal Neurons and Reorganization of Ion Channel Expression in a Rett Syndrome Model. |
| Volume: |
232 |
| Issue: |
5 |
| Pages: |
1151-1164 |
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