|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 1 to 73 out of 73 for Shoc1

0.017s

Categories

Hits by Category

Hits by Strain

Type Details Score
Gene
158401 | SHOC1
Type: gene
Organism: human
•
•
•
•
•
Gene
116412367 | shoc1
Type: gene
Organism: frog, western clawed
•
•
•
•
•
Gene
686050 | Shoc1
Type: gene
Organism: rat
•
•
•
•
•
Gene
464659 | SHOC1
Type: gene
Organism: chimpanzee
•
•
•
•
•
Gene
617568 | SHOC1
Type: gene
Organism: cattle
•
•
•
•
•
Gene
100687399 | SHOC1
Type: gene
Organism: dog, domestic
•
•
•
•
•
Gene
100002712 | shoc1
Type: gene
Organism: zebrafish
•
•
•
•
•
Gene
707991 | SHOC1
Type: gene
Organism: macaque, rhesus
•
•
•
•
•
Protein Domain
IPR039991 | SHOC1
Type: Family
Description: Shortage in chiasmata 1 orthologue, the plant SHOC1 orthologue in animals, has been shown to act at mid-stage steps of the crossover (CO) formation process. It also interacts with TEX11, another protein important for the formation of COs. SHOC1 has associated ATPase activity, but lacks endonuclease activity, so it has been speculated that SHOC1 may protect against dissociation by anti-crossover activities instead of having a role in cleaving recombination intermediates to produce COs [].
•
•
•
•
•
Protein Coding Gene
MGI:2140313 | Shoc1
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Publication
29742103 | J:262079
First Author: Guiraldelli MF
Year: 2018
Journal: PLoS Genet
Title: SHOC1 is a ERCC4-(HhH)2-like protein, integral to the formation of crossover recombination intermediates during mammalian meiosis.
Volume: 14
Issue: 5
Pages: e1007381
•
•
•
•
•
Publication
30746471 | J:297328
First Author: Zhang Q
Year: 2019
Journal: Sci Adv
Title: SPO16 binds SHOC1 to promote homologous recombination and crossing-over in meiotic prophase I.
Volume: 5
Issue: 1
Pages: eaau9780
•
•
•
•
•
Publication
35485979 | J:331352
 
First Author: Wang W
Year: 2022
Journal: Mol Hum Reprod
Title: Bi-allelic variants in SHOC1 cause non-obstructive azoospermia with meiosis arrest in humans and mice.
Volume: 28
Issue: 6
•
•
•
•
•
Protein
A2ALV5
Organism: Mus musculus/domesticus
Length: 1481  
Fragment?: false
•
•
•
•
•
Protein
Q3UXC4
Organism: Mus musculus/domesticus
Length: 402  
Fragment?: false
•
•
•
•
•
Publication
36440627 | J:347973
First Author: Li Y
Year: 2023
Journal: EMBO Rep
Title: M1AP interacts with the mammalian ZZS complex and promotes male meiotic recombination.
Volume: 24
Issue: 2
Pages: e55778
•
•
•
•
•
Protein Coding Gene
MGP_CAROLIEiJ_G0026060 | -
Type: protein_coding_gene
Organism: Mus caroli
•
•
•
•
•
Protein Coding Gene
MGP_129S1SvImJ_G0028333 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_AJ_G0028294 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_AKRJ_G0028243 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_BALBcJ_G0028313 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_C3HHeJ_G0028034 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGI_C57BL6J_2140313 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_C57BL6NJ_G0028754 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_CASTEiJ_G0027472 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_CBAJ_G0027999 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_DBA2J_G0028149 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_FVBNJ_G0028116 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_LPJ_G0028248 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_NODShiLtJ_G0028140 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_NZOHlLtJ_G0028790 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_PWKPhJ_G0027197 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_WSBEiJ_G0027550 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_PahariEiJ_G0028398 | -
Type: protein_coding_gene
Organism: Mus pahari
•
•
•
•
•
Protein Coding Gene
MGP_SPRETEiJ_G0027025 | -
Type: protein_coding_gene
Organism: Mus spretus
•
•
•
•
•
Publication
30272023 | J:268520
 
First Author: Zhang Q
Year: 2018
Journal: Commun Biol
Title: Evolutionarily-conserved MZIP2 is essential for crossover formation in mammalian meiosis.
Volume: 1
Pages: 147
•
•
•
•
•
Publication
- | J:84900
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Journal: Database Download
Title: Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database
•
•
•
•
•
Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
•
•
•
•
•
Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
•
•
•
•
•
Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
•
•
•
•
•
Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
21771883 | -
First Author: Macaisne N
Year: 2011
Journal: J Cell Sci
Title: SHOC1 and PTD form an XPF-ERCC1-like complex that is required for formation of class I crossovers.
Volume: 124
Issue: Pt 16
Pages: 2687-91
•
•
•
•
•
Interaction Experiment
Guiraldelli MF (2018)
Description: SHOC1 is a ERCC4-(HhH)2-like protein, integral to the formation of crossover recombination intermediates during mammalian meiosis.
•
•
•
•
•
DO Term
DOID:0070574 | spermatogenic failure 75
•
•
•
•
•
Publication
18812090 | -
First Author: Macaisne N
Year: 2008
Journal: Curr Biol
Title: SHOC1, an XPF endonuclease-related protein, is essential for the formation of class I meiotic crossovers.
Volume: 18
Issue: 18
Pages: 1432-7
•
•
•
•
•
Protein Domain
IPR038824 | SHOC1-like
Type: Family
Description: This entry represents a group of plant proteins, including shortage in chiasmata 1 (SHOC1) from Arabidopsis. SHOC1 is essential for the formation of class I meiotic crossovers [, ].
•
•
•
•
•
Publication
30949703 | J:285969
First Author: Liu H
Year: 2019
Journal: Nucleic Acids Res
Title: SCRE serves as a unique synaptonemal complex fastener and is essential for progression of meiosis prophase I in mice.
Volume: 47
Issue: 11
Pages: 5670-5683
•
•
•
•
•
Protein
Q3KQP7
Organism: Mus musculus/domesticus
Length: 186  
Fragment?: false
•
•
•
•
•
Protein
E3W998
Organism: Mus musculus/domesticus
Length: 175  
Fragment?: false
•
•
•
•
•
Protein
A0A5F8MPD9
Organism: Mus musculus/domesticus
Length: 177  
Fragment?: false
•
•
•
•
•
Protein
A0A805TBR8
Organism: Mus musculus/domesticus
Length: 138  
Fragment?: false
•
•
•
•
•
Protein
A0A803Z0B9
Organism: Mus musculus/domesticus
Length: 184  
Fragment?: false
•
•
•
•
•
Protein Domain
IPR027857 | SCRE
Type: Family
Description: This entry represents the Protein SPO16 homologue (SPO16, also known as Synaptonemal complex reinforcing element SCRE), including the mammalian orthologue of budding yeast Spo16. It plays a key role in reinforcing the integrity of the central element of the synaptonemal complex (SC), resulting in the SC stabilization which ensures the progression of meiotic prophase I in male and female germ cells [. It promotes homologous recombination and crossing-over in meiotic prophase I via its association with SHOC1 []. It is also required for the localization of TEX11 and MSH4 to recombination intermediates [].
•
•
•
•
•
Publication
37439366 | J:344887
First Author: Zhang Q
Year: 2023
Journal: Nucleic Acids Res
Title: The FLIP-FIGNL1 complex regulates the dissociation of RAD51/DMC1 in homologous recombination and replication fork restart.
Volume: 51
Issue: 16
Pages: 8606-8622
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom