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Search results 1 to 100 out of 122 for Smg9

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Hits by Pathway

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Hits by Strain

Type Details Score
Gene
56006 | SMG9
Type: gene
Organism: human
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Gene
100216177 | smg9
Type: gene
Organism: frog, western clawed
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Gene
365215 | Smg9
Type: gene
Organism: rat
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Gene
476444 | SMG9
Type: gene
Organism: dog, domestic
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Gene
456097 | SMG9
Type: gene
Organism: chimpanzee
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Gene
615492 | SMG9
Type: gene
Organism: cattle
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Gene
562557 | smg9
Type: gene
Organism: zebrafish
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Gene
710940 | SMG9
Type: gene
Organism: macaque, rhesus
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Protein Domain
IPR039177 | SMG9
Type: Family
Description: Nonsense-mediated mRNA decay (NMD) is a surveillance mechanism that detects and degrades mRNAs containing premature translation termination codons. Protein SMG9 is a component of the SMG1C protein kinase complex (along with SMG1 and SMG8) which is recruited to stalled ribosomes. SMG8 and SMG9 suppress SMG1 kinase activity in the isolated SMG1 complex [].
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Protein Coding Gene
MGI:1919247 | Smg9
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein
D3Z719
Organism: Mus musculus/domesticus
Length: 210  
Fragment?: true
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Protein
F6YIT4
Organism: Mus musculus/domesticus
Length: 118  
Fragment?: true
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Protein
Q9DB90
Organism: Mus musculus/domesticus
Length: 520  
Fragment?: false
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Publication
27018474 | J:231968
First Author: Shaheen R
Year: 2016
Journal: Am J Hum Genet
Title: Mutations in SMG9, Encoding an Essential Component of Nonsense-Mediated Decay Machinery, Cause a Multiple Congenital Anomaly Syndrome in Humans and Mice.
Volume: 98
Issue: 4
Pages: 643-52
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Publication
19417104 | -
First Author: Yamashita A
Year: 2009
Journal: Genes Dev
Title: SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay.
Volume: 23
Issue: 9
Pages: 1091-105
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Protein Coding Gene
MGP_CAROLIEiJ_G0029333 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0031827 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0031806 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0031735 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0031812 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0031532 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1919247 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0032275 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0030873 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0031497 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0031651 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0031604 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0031730 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0031641 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0032307 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0030597 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0030976 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0021184 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0030427 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
36859534 | J:333799
First Author: Radford BN
Year: 2023
Journal: Nat Commun
Title: Defects in placental syncytiotrophoblast cells are a common cause of developmental heart disease.
Volume: 14
Issue: 1
Pages: 1174
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Publication
27996060 | J:240631
 
First Author: Wilson R
Year: 2016
Journal: Wellcome Open Res
Title: Highly variable penetrance of abnormal phenotypes in embryonic lethal knockout mice.
Volume: 1
Pages: 1
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Publication
33473114 | J:301232
First Author: Butterfield NC
Year: 2021
Journal: Nat Commun
Title: Accelerating functional gene discovery in osteoarthritis.
Volume: 12
Issue: 1
Pages: 467
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Publication
- | J:239583
     
First Author: Mouse Genome Informatics and the Consortium: Deciphering the Mechanisms of Developmental Disorders (DMDD)
Year: 2017
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from Deciphering the Mechanisms of Developmental Disorders (DMDD)
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Publication
29539633 | J:261316
First Author: Perez-Garcia V
Year: 2018
Journal: Nature
Title: Placentation defects are highly prevalent in embryonic lethal mouse mutants.
Volume: 555
Issue: 7697
Pages: 463-468
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Publication
38822427 | J:350444
First Author: Martinez-Mayer J
Year: 2024
Journal: Genome Med
Title: Knockout mice with pituitary malformations help identify human cases of hypopituitarism.
Volume: 16
Issue: 1
Pages: 75
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Publication
- | J:188991
     
First Author: The Jackson Laboratory
Year: 2012
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by The Jackson Laboratory
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Publication
- | J:204739
     
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
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Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Allele
Smg9<em1Smoc> | MGI:7292481
Name: SMG9 nonsense mediated mRNA decay factor; endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
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UniProt Feature
UniProt Feature
Begin: 2
Description: Nonsense-mediated mRNA decay factor SMG9
Type: chain
End: 520
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Gene
779402 | smg9.S
Type: gene
Organism: frog, African clawed
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Strain
MGI:6476343 | C57BL/6JSmoc-Smg9<em1Smoc>/Smoc
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
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Protein
Q9DB90-2
Organism: Mus musculus/domesticus
Length: 234  
Fragment?: false
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Allele
Smg9<+> | MGI:5433644
 
Name: SMG9 nonsense mediated mRNA decay factor; wild type
Allele Type: Not Specified
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Allele
Smg9<em1(IMPC)J> | MGI:5616624
Name: SMG9 nonsense mediated mRNA decay factor; endonuclease-mediated mutation 1, Jackson
Allele Type: Endonuclease-mediated
Attribute String: Hypomorph
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Allele
Smg9<Gt(D168H12)Wrst> | MGI:3892760
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap D168H12, German Gene Trap Consortium
Allele Type: Gene trapped
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Allele
Smg9<Gt(OST42669)Lex> | MGI:4158093
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap OST42669, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Smg9<Gt(OST67113)Lex> | MGI:4171654
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap OST67113, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Smg9<Gt(OST160756)Lex> | MGI:4210149
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap OST160756, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Smg9<Gt(OST160760)Lex> | MGI:4210151
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap OST160760, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Smg9<Gt(OST258327)Lex> | MGI:4254169
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap OST258327, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Smg9<Gt(OST280465)Lex> | MGI:4262298
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap OST280465, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Smg9<tm1e(EUCOMM)Wtsi> | MGI:4433407
Name: SMG9 nonsense mediated mRNA decay factor; targeted mutation 1e, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
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Allele
Smg9<tm1a(EUCOMM)Wtsi> | MGI:4433646
Name: SMG9 nonsense mediated mRNA decay factor; targeted mutation 1a, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Conditional ready, Null/knockout, Reporter
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Strain
MGI:6347368 | C57BL/6N-Smg9<em1(IMPC)J>/Mmucd
Attribute String: mutant strain, coisogenic, endonuclease-mediated mutation
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Strain
MGI:5617375 | C57BL/6NJ-Smg9<em1(IMPC)J>/J
Attribute String: endonuclease-mediated mutation, mutant strain, coisogenic
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Allele
Smg9<tm1b(EUCOMM)Wtsi> | MGI:5692712
Name: SMG9 nonsense mediated mRNA decay factor; targeted mutation 1b, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
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Allele
Smg9<tm1c(EUCOMM)Wtsi> | MGI:7460286
Name: SMG9 nonsense mediated mRNA decay factor; targeted mutation 1c, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Conditional ready
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Allele
Smg9<tm1d(EUCOMM)Wtsi> | MGI:7460287
Name: SMG9 nonsense mediated mRNA decay factor; targeted mutation 1d, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Null/knockout
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Genotype
Genotype
Symbol: Smg9/Smg9
Background: involves: C57BL/6NJ
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Smg9/Smg9
Background: C57BL/6NJ-Smg9/J
Zygosity: hm
Has Mutant Allele: true
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Allele
Smg9<Gt(IST12381H7)Tigm> | MGI:4077699
 
Name: SMG9 nonsense mediated mRNA decay factor; gene trap IST12381H7, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
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Strain
MGI:7520026 | C57BL/6-Smg9<tm1a(EUCOMM)Wtsi>
Attribute String: coisogenic, endonuclease-mediated mutation, targeted mutation
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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