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Search results 1 to 84 out of 84 for Snapc5

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Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Gene
10302 | SNAPC5
Type: gene
Organism: human
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Gene
616058 | SNAPC5
Type: gene
Organism: cattle
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Gene
100612370 | SNAPC5
Type: gene
Organism: chimpanzee
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Gene
415550 | SNAPC5
Type: gene
Organism: chicken
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Gene
492409 | snapc5
Type: gene
Organism: zebrafish
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Gene
710777 | SNAPC5
Type: gene
Organism: macaque, rhesus
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Gene
100302394 | snapc5
Type: gene
Organism: frog, western clawed
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Gene
691501 | Snapc5
Type: gene
Organism: rat
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Gene
610865 | SNAPC5
Type: gene
Organism: dog, domestic
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Protein Domain
IPR029138 | SNAPC5
Type: Family
Description: snRNA-activating protein complex subunit 5 (also known as SNAPC5 or SNAPc19) is part of the core components of the SNAPc complex required for the transcription of both RNA polymerase II and III small-nuclear RNA genes []. The RNA polymerase II snRNA promoters consist of a proximal sequence element (PSE), while the RNA polymerase III snRNA promoters consist of both a PSE and a TATA box. SNAPc binds to the PSE in both RNA polymerases and other PSE sequences in other snRNA genes. Therefore, SNAPc is also called the PSE transcription factor (PTF) or PSE-binding protein (PBP). The human SNAPc19 and SNAPc45 subunits are dispensable for transcription in vitro and are not as widely conserved as the other three, SNAPc190, SNAPc43 and SNAPc50, suggesting that these vertebrate-specific SNAPc subunits may have adapted specialised regulatory roles for snRNA gene transcription [].
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Protein Coding Gene
MGI:1914282 | Snapc5
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein
Q8R2K7
Organism: Mus musculus/domesticus
Length: 98  
Fragment?: false
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Protein
E9QPK5
Organism: Mus musculus/domesticus
Length: 102  
Fragment?: false
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Publication
18442490 | -
First Author: Jawdekar GW
Year: 2008
Journal: Biochim Biophys Acta
Title: Transcriptional regulation of human small nuclear RNA genes.
Volume: 1779
Issue: 5
Pages: 295-305
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Publication
9732265 | -
First Author: Henry RW
Year: 1998
Journal: Genes Dev
Title: SNAP19 mediates the assembly of a functional core promoter complex (SNAPc) shared by RNA polymerases II and III.
Volume: 12
Issue: 17
Pages: 2664-72
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Protein Coding Gene
MGP_CAROLIEiJ_G0032340 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0034937 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0034917 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0034847 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0034910 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0034620 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1914282 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0035429 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0033941 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0034591 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0034750 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0034692 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0034833 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0034735 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0035451 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0033645 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0034054 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0015206 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0033479 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2769723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2769723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2853323
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2845723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2845723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1795023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1795023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1869223
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2854023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2762123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2762123
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:1797223
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Male
Emaps: EMAPS:1832123
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Female
Emaps: EMAPS:1832123
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2851823
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2851823
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2760523
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2760523
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2852723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2852723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2874723
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Male
Emaps: EMAPS:2850023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12988
Specimen Label: GUDMAP:12988
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:2850023
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:5001613
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1796223
Pattern: Not Specified
Stage: TS23
Assay Id: MGI:5542167
Age: embryonic day 15.5
Image: GUDMAP:12989
Specimen Label: GUDMAP:12989
Detected: true
Specimen Num: 2
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Publication
15867431 | J:98896
First Author: Miyamoto-Sato E
Year: 2005
Journal: Genome Res
Title: Cell-free cotranslation and selection using in vitro virus for high-throughput analysis of protein-protein interactions and complexes.
Volume: 15
Issue: 5
Pages: 710-7
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Publication
- | J:80001
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: FANTOM2 Data Curation in Mouse Genome Informatics
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
- | J:72247
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

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Cambridge CB2 3EH, United Kingdom