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Search results 1 to 100 out of 104 for Spata7

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Hits by Category

Hits by Strain

Type Details Score
Gene
55812 | SPATA7
Type: gene
Organism: human
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Gene
100498037 | spata7
Type: gene
Organism: frog, western clawed
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Gene
192225 | Spata7
Type: gene
Organism: rat
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Gene
480411 | SPATA7
Type: gene
Organism: dog, domestic
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Gene
453088 | SPATA7
Type: gene
Organism: chimpanzee
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Gene
510352 | SPATA7
Type: gene
Organism: cattle
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Gene
423397 | SPATA7
Type: gene
Organism: chicken
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Gene
793830 | spata7
Type: gene
Organism: zebrafish
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Gene
693836 | SPATA7
Type: gene
Organism: macaque, rhesus
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Protein Coding Gene
MGI:2144877 | Spata7
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Domain
IPR029357 | SPATA7
Type: Family
Description: This entry represents the spermatogenesis-associated protein 7 (SPATA7, also known as HSD3). It was first identified in human spermatocytes. Later on, it was also found expressed in multiple layers of the mature mouse retina []. Mutations in SPATA7 cause Leber congenital amaurosis 3 (LCA3), which is a severe dystrophy of the retina, typically becoming evident in the first years of life [, ]. Mutations in SPATA7 also cause autosomal recessive retinitis pigmentosa (ARRP), which is a retinal dystrophy belonging to the group of pigmentary retinopathies [].
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Publication
19268277 | J:150892
First Author: Wang H
Year: 2009
Journal: Am J Hum Genet
Title: Mutations in SPATA7 cause Leber congenital amaurosis and juvenile retinitis pigmentosa.
Volume: 84
Issue: 3
Pages: 380-7
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Publication
20104588 | -
First Author: Perrault I
Year: 2010
Journal: Hum Mutat
Title: Spectrum of SPATA7 mutations in Leber congenital amaurosis and delineation of the associated phenotype.
Volume: 31
Issue: 3
Pages: E1241-50
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Publication
35368022 | J:323103
First Author: Lu J
Year: 2022
Journal: Sci Rep
Title: Spata7 is required for maintenance of the retinal connecting cilium.
Volume: 12
Issue: 1
Pages: 5575
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Publication
29100828 | J:279827
 
First Author: Eblimit A
Year: 2018
Journal: Exp Eye Res
Title: Conditional loss of Spata7 in photoreceptors causes progressive retinal degeneration in mice.
Volume: 166
Pages: 120-130
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Publication
29899041 | J:264617
First Author: Dharmat R
Year: 2018
Journal: J Cell Biol
Title: SPATA7 maintains a novel photoreceptor-specific zone in the distal connecting cilium.
Volume: 217
Issue: 8
Pages: 2851-2865
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Publication
25398945 | J:216279
First Author: Eblimit A
Year: 2015
Journal: Hum Mol Genet
Title: Spata7 is a retinal ciliopathy gene critical for correct RPGRIP1 localization and protein trafficking in the retina.
Volume: 24
Issue: 6
Pages: 1584-601
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Protein
Q80VP2
Organism: Mus musculus/domesticus
Length: 582  
Fragment?: false
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Protein
Q3TTL3
Organism: Mus musculus/domesticus
Length: 550  
Fragment?: false
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Protein
Q3U5D0
Organism: Mus musculus/domesticus
Length: 415  
Fragment?: false
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Protein Coding Gene
MGP_CAROLIEiJ_G0018010 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0020006 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0019961 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0019937 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0019947 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0019749 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_2144877 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0020396 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0019295 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0019721 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0019832 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0019821 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0019908 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0019863 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0020425 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0019059 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0019349 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0029768 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0018855 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
     
Probe: MGI:6110158
Assay Type: RNA in situ
Annotation Date: 2018-01-16
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1619824
Stage: TS24
Assay Id: MGI:6110160
Age: embryonic day 16.5
Specimen Label: 3A
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:6110163
Assay Type: Immunohistochemistry
Annotation Date: 2018-01-16
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1716828
Stage: TS28
Assay Id: MGI:6110169
Age: postnatal day 4
Specimen Label: 3D
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:6110158
Assay Type: RNA in situ
Annotation Date: 2018-01-16
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1716828
Stage: TS28
Assay Id: MGI:6110160
Age: postnatal day 4
Specimen Label: 3B
Detected: false
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915528
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585657
Age: postnatal day 6-7
Specimen Label: P6/7
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
   
Probe: MGI:6110158
Assay Type: RNA in situ
Annotation Date: 2018-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915528
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110160
Age: postnatal day 21
Specimen Label: 3C
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
   
Probe: MGI:6110163
Assay Type: Immunohistochemistry
Annotation Date: 2018-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915528
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110169
Age: postnatal day 21
Specimen Label: 3G
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:6110158
Assay Type: RNA in situ
Annotation Date: 2018-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110160
Age: postnatal day 21
Specimen Label: 3C
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
   
Probe: MGI:6110163
Assay Type: Immunohistochemistry
Annotation Date: 2018-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110169
Age: postnatal day 21
Specimen Label: 3G
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:6110163
Assay Type: Immunohistochemistry
Annotation Date: 2018-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3568728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110169
Age: postnatal day 21
Specimen Label: 3J
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1647028
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585657
Age: postnatal day 6
Note: Expression was widespread.
Specimen Label: CNS
Detected: true
Specimen Num: 8
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128423
Specimen Label: JAX_1128423
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128425
Specimen Label: JAX_1128425
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128427
Specimen Label: JAX_1128427
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128429
Specimen Label: JAX_1128429
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128439
Specimen Label: JAX_1128439
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128441
Specimen Label: JAX_1128441
Detected: true
Specimen Num: 6
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128443
Specimen Label: JAX_1128443
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2021-04-16
Strength: Present
Sex: Female
Emaps: EMAPS:1603920
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:6692420
Age: embryonic day 12.5
Image: JAX_1128445
Specimen Label: JAX_1128445
Detected: true
Specimen Num: 8
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GXD Expression
GXD Expression
   
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3274328
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585657
Age: postnatal day 6
Specimen Label: CNS
Detected: true
Specimen Num: 8
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GXD Expression
GXD Expression
 
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915726
Pattern: Not Specified
Stage: TS26
Assay Id: MGI:3585657
Age: embryonic day 18.0
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: E18
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585657
Age: postnatal day 0-1
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: P0/1
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3585657
Age: postnatal day 2-3
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: P2/3
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585657
Age: postnatal day 4-5
Note: Expression was detected in the outer neuroblastic layer.
Specimen Label: P4/5
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
   
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585657
Age: postnatal day 6-7
Specimen Label: P6/7
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
   
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585657
Age: postnatal day 8-10
Specimen Label: P8/10
Detected: true
Specimen Num: 6
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GXD Expression
GXD Expression
   
Probe: MGI:1404065
Assay Type: RNA in situ
Annotation Date: 2005-08-30
Strength: Present
Sex: Male
Emaps: EMAPS:1915728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3585657
Age: postnatal adult
Specimen Label: Adult
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
   
Probe: MGI:6110158
Assay Type: RNA in situ
Annotation Date: 2018-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3573928
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110160
Age: postnatal day 21
Specimen Label: 3C
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
   
Probe: MGI:6110163
Assay Type: Immunohistochemistry
Annotation Date: 2018-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3573928
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110169
Age: postnatal day 21
Specimen Label: 3G
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:6110163
Assay Type: Immunohistochemistry
Annotation Date: 2018-01-16
Strength: Trace
Sex: Not Specified
Emaps: EMAPS:3568828
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6110169
Age: postnatal day 21
Specimen Label: 3J
Detected: true
Specimen Num: 3
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Publication
29799838 | J:262823
First Author: Kasowitz SD
Year: 2018
Journal: PLoS Genet
Title: Nuclear m6A reader YTHDC1 regulates alternative polyadenylation and splicing during mouse oocyte development.
Volume: 14
Issue: 5
Pages: e1007412
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Publication
32290105 | J:282558
 
First Author: Collin GB
Year: 2020
Journal: Cells
Title: Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss.
Volume: 9
Issue: 4
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Publication
- | J:66660
       
First Author: Mouse Genome Database and National Center for Biotechnology Information Editorial Staff Collaboration
Year: 2001
Title: LocusLink Collaboration
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Publication
15226823 | J:93300
First Author: Blackshaw S
Year: 2004
Journal: PLoS Biol
Title: Genomic analysis of mouse retinal development.
Volume: 2
Issue: 9
Pages: E247
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Publication
- | J:188991
     
First Author: The Jackson Laboratory
Year: 2012
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by The Jackson Laboratory
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Publication
24194600 | J:228563
First Author: Koscielny G
Year: 2014
Journal: Nucleic Acids Res
Title: The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Volume: 42
Issue: Database issue
Pages: D802-9
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Publication
- | J:80155
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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