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Search results 1 to 100 out of 151 for Ss18

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Categories

Hits by Category

Hits by Strain

Type Details Score
Gene
6760 | SS18
Type: gene
Organism: human
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Gene
780399 | ss18
Type: gene
Organism: frog, western clawed
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Gene
361295 | Ss18
Type: gene
Organism: rat
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Gene
455345 | SS18
Type: gene
Organism: chimpanzee
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Gene
480171 | SS18
Type: gene
Organism: dog, domestic
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Gene
540947 | SS18
Type: gene
Organism: cattle
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Gene
326668 | ss18
Type: gene
Organism: zebrafish
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Gene
709897 | SS18
Type: gene
Organism: macaque, rhesus
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Gene
421085 | SS18
Type: gene
Organism: chicken
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Protein Domain
IPR044779 | SS18
Type: Family
Description: SSXT (also known as SS18) appears to function synergistically with RBM14 as a transcriptional coactivator [].The SSXT protein is involved in synovial sarcoma in humans. A SYT-SSX fusion gene resulting from the chromosomal translocation t(X;18) (p11;q11) is characteristic of synovial sarcomas. This translocation fuses the SSXT (SYT) gene from chromosome 18 to either of two homologous genes at Xp11, SSX1 or SSX2 [].The SS18 family also includes SS18-like proteins 1 and 2, and GRF1-interacting factors from plants []. SS18-like protein 1 is a transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons [, ].
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Protein Coding Gene
MGI:107708 | Ss18
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein
Q8BJJ6
Organism: Mus musculus/domesticus
Length: 387  
Fragment?: false
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Protein
Q6P1I1
Organism: Mus musculus/domesticus
Length: 392  
Fragment?: true
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Protein
A0A3Q4L318
Organism: Mus musculus/domesticus
Length: 143  
Fragment?: true
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Gene
51188 | SS18L2
Type: gene
Organism: human
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Publication
14716005 | J:87443
First Author: Aizawa H
Year: 2004
Journal: Science
Title: Dendrite development regulated by CREST, a calcium-regulated transcriptional activator.
Volume: 303
Issue: 5655
Pages: 197-202
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Publication
19081374 | -
First Author: Qiu Z
Year: 2008
Journal: Neuron
Title: A calcium-dependent switch in a CREST-BRG1 complex regulates activity-dependent gene expression.
Volume: 60
Issue: 5
Pages: 775-87
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Protein
Q9D174
Organism: Mus musculus/domesticus
Length: 77  
Fragment?: false
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Protein
Q8BJH8
Organism: Mus musculus/domesticus
Length: 418  
Fragment?: false
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Protein
A0A3Q4EGQ6
Organism: Mus musculus/domesticus
Length: 61  
Fragment?: false
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Protein
Q8VHA9
Organism: Mus musculus/domesticus
Length: 387  
Fragment?: false
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Protein
Q8BVH6
Organism: Mus musculus/domesticus
Length: 119  
Fragment?: true
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Protein
A0A1L1SQ78
Organism: Mus musculus/domesticus
Length: 69  
Fragment?: false
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Protein
Q8BKL1
Organism: Mus musculus/domesticus
Length: 344  
Fragment?: false
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Publication
15919756 | -
First Author: Iwasaki T
Year: 2005
Journal: Endocrinology
Title: Synovial sarcoma translocation (SYT) encodes a nuclear receptor coactivator.
Volume: 146
Issue: 9
Pages: 3892-9
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Protein
Q8BW22
Organism: Mus musculus/domesticus
Length: 402  
Fragment?: false
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Protein
Q62280
Organism: Mus musculus/domesticus
Length: 418  
Fragment?: false
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Protein
A0A1L1SQU5
Organism: Mus musculus/domesticus
Length: 96  
Fragment?: false
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Protein
Q8VHA8
Organism: Mus musculus/domesticus
Length: 313  
Fragment?: false
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Protein
A0A1L1SVA4
Organism: Mus musculus/domesticus
Length: 49  
Fragment?: false
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Protein
Q8VHB0
Organism: Mus musculus/domesticus
Length: 352  
Fragment?: false
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Publication
12173050 | -
First Author: Xie Y
Year: 2002
Journal: Oncogene
Title: The SYT-SSX1 fusion type of synovial sarcoma is associated with increased expression of cyclin A and D1. A link between t(X;18)(p11.2; q11.2) and the cell cycle machinery.
Volume: 21
Issue: 37
Pages: 5791-6
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Publication
19648231 | -
First Author: Lee BH
Year: 2009
Journal: Plant Physiol
Title: The Arabidopsis GRF-INTERACTING FACTOR gene family performs an overlapping function in determining organ size as well as multiple developmental properties.
Volume: 151
Issue: 2
Pages: 655-68
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Publication
11435705 | J:70473
First Author: de Bruijn DR
Year: 2001
Journal: Cytogenet Cell Genet
Title: Mapping and characterization of the mouse and human SS18 genes, two human SS18-like genes and a mouse Ss18 pseudogene.
Volume: 92
Issue: 3-4
Pages: 310-9
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Publication
16926188 | J:114839
First Author: de Bruijn DR
Year: 2006
Journal: Hum Mol Genet
Title: Targeted disruption of the synovial sarcoma-associated SS18 gene causes early embryonic lethality and affects PPARBP expression.
Volume: 15
Issue: 19
Pages: 2936-44
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Publication
23785148 | J:199644
First Author: Staahl BT
Year: 2013
Journal: J Neurosci
Title: Kinetic analysis of npBAF to nBAF switching reveals exchange of SS18 with CREST and integration with neural developmental pathways.
Volume: 33
Issue: 25
Pages: 10348-61
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Gene
646213 | SS18L2P1
Type: gene
Organism: human
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Gene
724101 | SS18L2P2
Type: gene
Organism: human
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Publication
23540691 | J:197250
First Author: Kadoch C
Year: 2013
Journal: Cell
Title: Reversible disruption of mSWI/SNF (BAF) complexes by the SS18-SSX oncogenic fusion in synovial sarcoma.
Volume: 153
Issue: 1
Pages: 71-85
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Protein Coding Gene
MGP_CAROLIEiJ_G0022014 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0024168 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0024130 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0024097 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0024129 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0023896 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_107708 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0024574 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0023373 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0023868 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0023997 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0023962 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0024080 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0023991 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0024620 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0023119 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0023439 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0018750 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0022928 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
8760306 | J:34965
First Author: de Bruijn DR
Year: 1996
Journal: Oncogene
Title: Isolation and characterization of the mouse homolog of SYT, a gene implicated in the development of human synovial sarcomas.
Volume: 13
Issue: 3
Pages: 643-8
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GXD Expression
GXD Expression
   
Probe: MGI:4428588
Assay Type: RNA in situ
Annotation Date: 2024-05-29
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3270422
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:7643319
Age: embryonic day 14.5
Specimen Label: Supplementary table 2
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:4428588
Assay Type: RNA in situ
Annotation Date: 2024-08-22
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3270422
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:7711629
Age: embryonic day 14.5
Specimen Label: Supplementary Table 3
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3526298
Assay Type: RNA in situ
Annotation Date: 2005-02-14
Strength: Present
Sex: Male
Emaps: EMAPS:2909821
Pattern: Not Specified
Stage: TS21
Assay Id: MGI:3526356
Age: embryonic day 12.5
Specimen Label: not shown
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:4428588
Assay Type: RNA in situ
Annotation Date: 2024-05-29
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1754722
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:7643319
Age: embryonic day 14.5
Specimen Label: Supplementary table 2
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:4428588
Assay Type: RNA in situ
Annotation Date: 2024-08-22
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1754722
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:7711629
Age: embryonic day 14.5
Specimen Label: Supplementary Table 3
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:3526298
Assay Type: RNA in situ
Annotation Date: 2005-02-14
Strength: Present
Sex: Female
Emaps: EMAPS:1796221
Pattern: Not Specified
Stage: TS21
Assay Id: MGI:3526356
Age: embryonic day 12.5
Specimen Label: not shown
Detected: true
Specimen Num: 2
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Publication
1521591 | J:128
First Author: Phelan JP
Year: 1992
Journal: Exp Gerontol
Title: Genetic variability and rodent models of human aging.
Volume: 27
Issue: 2
Pages: 147-59
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Publication
17686994 | J:128355
First Author: Barco R
Year: 2007
Journal: Mol Biol Cell
Title: The synovial sarcoma SYT-SSX2 oncogene remodels the cytoskeleton through activation of the ephrin pathway.
Volume: 18
Issue: 10
Pages: 4003-12
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Publication
22439931 | J:189346
First Author: Su L
Year: 2012
Journal: Cancer Cell
Title: Deconstruction of the SS18-SSX fusion oncoprotein complex: insights into disease etiology and therapeutics.
Volume: 21
Issue: 3
Pages: 333-47
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Publication
29374058 | J:283189
First Author: Alpsoy A
Year: 2018
Journal: J Biol Chem
Title: Glioma tumor suppressor candidate region gene 1 (GLTSCR1) and its paralog GLTSCR1-like form SWI/SNF chromatin remodeling subcomplexes.
Volume: 293
Issue: 11
Pages: 3892-3903
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Publication
17881493 | J:128367
First Author: Astorga J
Year: 2007
Journal: Development
Title: Hedgehog induction of murine vasculogenesis is mediated by Foxf1 and Bmp4.
Volume: 134
Issue: 20
Pages: 3753-61
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Publication
36289231 | J:330574
First Author: Fulton SL
Year: 2022
Journal: Nat Commun
Title: Rescue of deficits by Brwd1 copy number restoration in the Ts65Dn mouse model of Down syndrome.
Volume: 13
Issue: 1
Pages: 6384
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Publication
30510198 | J:268334
First Author: Gatchalian J
Year: 2018
Journal: Nat Commun
Title: A non-canonical BRD9-containing BAF chromatin remodeling complex regulates naive pluripotency in mouse embryonic stem cells.
Volume: 9
Issue: 1
Pages: 5139
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Publication
20007774 | J:156489
First Author: Krentz AD
Year: 2009
Journal: Proc Natl Acad Sci U S A
Title: The DM domain protein DMRT1 is a dose-sensitive regulator of fetal germ cell proliferation and pluripotency.
Volume: 106
Issue: 52
Pages: 22323-8
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Publication
14595844 | J:86589
First Author: McClive PJ
Year: 2003
Journal: Genesis
Title: Subtractive hybridisation screen identifies sexually dimorphic gene expression in the embryonic mouse gonad.
Volume: 37
Issue: 2
Pages: 84-90
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Publication
26655900 | J:314576
First Author: Narayanan R
Year: 2015
Journal: Cell Rep
Title: Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development.
Volume: 13
Issue: 9
Pages: 1842-54
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Publication
30186101 | J:266522
 
First Author: Elsen GE
Year: 2018
Journal: Front Neurosci
Title: The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.
Volume: 12
Pages: 571
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
- | J:188991
     
First Author: The Jackson Laboratory
Year: 2012
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by The Jackson Laboratory
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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